Query= MSMg01no532_l23.b1 MSMg01no532_l23.b1 CHROMAT_FILE:
MSMg01no532_l23.b1 PHD_FILE: MSMg01no532_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:45 2005
(631 letters)
>mm_chr10_64593611_64594641
Length = 1031
Score = 1123 bits (581), Expect = 0.0
Identities = 617/629 (98%), Gaps = 3/629 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcagcctgctacaagttgttccattgtatgttgggttggcactgttgctcagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttcagcctgctacaagttgttccattgtatgttgggttggcactgttgctcagg 263
Query: 65 tggttgagatccaagttcacacgcattcttccc-tatacagtcaaggcagtgtgggaacg 123
||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 264 aggttgggatctaagttcacacgtattcttcccctatacagtcaaggcagtgtgggaacg 323
Query: 124 cacagtacttatcagtgaagggtgcttcttatcactatggtgaccattgagaagtcagga 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacagtacttatcagtgaagggtgcttcttatcactatggtgaccattgagaagtcagga 383
Query: 184 gtc-ttcggcctttctactgaaaattctgttactgatggggaagccagagaaggagcttg 242
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atcctt-ggcctttctactgaaaattctgttactgatggggaagccagagaaggagcttg 442
Query: 243 gatcacagtgttgaaaggtttttgacatgatgtttggaggttttttggagacagggtttc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gatcacagtgttgaaaggtttttgacatgatgtttggaggttttttggagacagggtttc 502
Query: 303 tctctgtatccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tctctgtatccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcag 562
Query: 363 aaatctacctgcctctgcctcccaagtgctgggattaaaggtatgcgccaccactgccca 422
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 aaatctacctgcctctgcctcccaagtgctgggattaaaggtatgtgccaccactgccca 622
Query: 423 gtaagaagacattttcaataaacattaaggaatgtactggatctaaatgcgctggtgtga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtaagaagacattttcaataaacattaaggaatgtactggatctaaatgcgctggtgtga 682
Query: 483 atacaaggagatataaatcaaactgtgtaattcaaaattacaatactatagattgaataa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atacaaggagatataaatcaaactgtgtaattcaaaattacaatactatagattgaataa 742
Query: 543 aatacaaggaaacagtgtattcatttcacaaatgcaagggaaacccttttcccgtctctt 602
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 743 aatacaaggaaacggtgtattcatttcacaaatgcaagggaaacccttttcctgtctctt 802
Query: 603 cacacttctcccagcaaacctacagttcc 631
|||||||||||||||||||||||||||||
Sbjct: 803 cacacttctcccagcaaacctacagttcc 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_l23.g1 MSMg01no532_l23.g1 CHROMAT_FILE:
MSMg01no532_l23.g1 PHD_FILE: MSMg01no532_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:45 2005
(455 letters)
>mm_chr10_64734413_64735267
Length = 855
Score = 810 bits (419), Expect = 0.0
Identities = 446/455 (98%)
Strand = Plus / Minus
Query: 1 ttaatgtgtacatatttttaaaactaaaatatatagatacataccttaaatcgaaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 709 ttaatgtgtacatatttttaaaactaaaatatatagatacataccttaaatggaaataat 650
Query: 61 gcctctgtttttaaatactaagaaatgttataaacaagaattctggtaatagagctaagt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 649 gcctctgtttttaaatactaagaaatgttataaacaagaattctggtaatagagctaaat 590
Query: 121 ttatagtcccagatactaaatgtagaaattatttttgatttatataatatatacacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 589 ttatagtcccagatactaaatgtagaaattatttttgatttatataatatatatacacac 530
Query: 181 acaaatgtttaatttctatgttggttgatggcatgggattagagtgttgaaatagcatat 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 529 acaaatgtttaatttctatgttggttgatggcatgggattggagtgttgaaatagcatat 470
Query: 241 atcattttaatgaatcaatgaaacaaaagtggtataatagaagagctttatttacaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcattttaatgaatcaatgaaacaaaagtggtataatagaagagctttatttacaagcc 410
Query: 301 ataactcaagacaagttaaaccttaatccaatgcatgcatatgtatcaaaagatggccta 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agaactcaagacaagttaaaccttaatccaatgcatgcatatgtatcaaaagatggccta 350
Query: 361 gtcggccatcactgcaaagagaggcccattggacttgcaaactttatatgccccagtaca 420
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 349 gtcggccatcactgcaaagagaggcccattggacacgcaaactttatatgccccagtaca 290
Query: 421 ggggaacaccagggccaaaaagggggagtgggtgg 455
|||||| |||||||||||||||||||||||||||
Sbjct: 289 ggggaatgccagggccaaaaagggggagtgggtgg 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
