Query= MSMg01no532_n10.b1 MSMg01no532_n10.b1 CHROMAT_FILE:
MSMg01no532_n10.b1 PHD_FILE: MSMg01no532_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:52 2005
(662 letters)
>mm_chr10_71794227_71795288
Length = 1062
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttctatggagagagagagatgtgaaacatgccagaacttactgagaaaatgt 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttctagggagagagagagatgtgaaacatgccagaacttactgagaaaatgt 263
Query: 64 cccgtattaactattttcaatgaaaataatgagccagacaagtttctctccctcctgaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccgtattaactattttcaatgaaaataatgagccagacaagtttctctccctcctgaag 323
Query: 124 agactatatatgttcctgttgggttccagtccatttttctttattaagaaggtattgaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agactatatatgttcctgttgggttccagtccatttttctttattaagaaggtattgaca 383
Query: 184 agataagcgtatttcctgctgtctcataaaagcatccagtcatacattatctgtgctgag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agataagcgtatttcctgctgtctcataaaagcatccagtcatacattatctgtgctgag 443
Query: 244 agggaaaacactcaaagaaattcatttgatgcaaggaagtaacagctttgcaaccggtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agggaaaacactcaaagaaattcatttgatgcaaggaagtaacagctttgcaaccggtga 503
Query: 304 aagaagaggactttcaaatgtttgaaattacagtggaacattgacccaaaggggccaaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaagaggactttcaaatgtttgaaattacagtggaacattgacccaaaggggccaaat 563
Query: 364 cagacattcctgctcataaaatgcagttgaaacatcccatcataagactaaatcaatatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagacattcctgctcataaaatgcagttgaaacatcccatcataagactaaatcaatatc 623
Query: 424 ttggcaggtggttaggacatattttttccacctaatgttttcttccccctactggtattg 483
|||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 624 ttggcaggtggttacgacatattttttccagctaatgttttctttcccctactggtattg 683
Query: 484 aaaacaaatatttccagaagctgattaaattcttacttgttgaaaaaaaaagtcttgccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaaacaaatatttccagaagctgattaaattcttacttgttgaaaaaaaaagtcttgccc 743
Query: 544 agaaaaatcaatggttaaaacaggcaggatgtgtcaagtcaggatcaattccttttgggc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agaaaaatcaatggttaaaacaggcaggatgtgtcaagtcaggatcaattccttttgggc 803
Query: 604 tataaatatctactctttgtattaactcacaaggaggtatgtacatatagggacgtggg 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tataaatatctactctttgtattaactcacaaggaggtatgtacatatagggacgtggg 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_n10.g1 MSMg01no532_n10.g1 CHROMAT_FILE:
MSMg01no532_n10.g1 PHD_FILE: MSMg01no532_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:52 2005
(655 letters)
>mm_chr10_71824458_71825512
Length = 1055
Score = 1191 bits (616), Expect = 0.0
Identities = 644/660 (97%), Gaps = 14/660 (2%)
Strand = Plus / Minus
Query: 1 atttgaaaaaaaaaatgttttttcagagcatcaaagtagaatgtgccctccatttcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 atttgaaaaaaaaaatgttttttcagagcatcaaagtagaatgtgccctccatttcatgc 729
Query: 61 ctgccctggaacgatgcaaacacattttgtattatttttttcttgtgggattcctttcat 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 728 ctgccctggaacgatgcaaacacattttgtatta-ttttttcttgtgggattcctttcat 670
Query: 121 gtgtaagaaattacttttgatatttcatga--tttttttttacgttaatcagttcaatga 178
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 669 gtgtaagaaattacttttgatatttcatgatttttttttttacgttaatcagttcaatga 610
Query: 179 aacttaactgaatgcccaatactagctttctgcattatactaagaattcaggagacaaag 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aacttaactgaatgcccaatactagctttctgcattatactaagaattcaggaga----- 555
Query: 239 atggataaggcacaggctttgtcatagggaaattttaccaagtagcaaaaatgacacata 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ---gataaggcacaggctttgtcatagggaaattttaccaagtagcaaaaatgacacata 498
Query: 299 aatgctgtgctaatgtaatttattattttagcatcatctcagttaagagacc---ttttt 355
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 497 aatgctgtgctaatgtaatttattattttagcatcatctcagttaagagacctttttttt 438
Query: 356 ttttttcttttgagacagagtcttataaattcttgctggcctggaactcaataactagtc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttttttcttttgagacagagtcttataaattcttgctggcctggaactcaataactagtc 378
Query: 416 aaaaatgaccttgaacttctgttcctcctgcttcctactcctagaattatagacatgtgc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaaaatgaccttgaacttctgttcctcctgcttcctactcctagaattatagacatgtgc 318
Query: 476 cacaatacctagcacacatgaactcaaatactttttgataagatctgaatgtgtgaataa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cacaatacctagcacacatgaactcaaatactttttgataagatctgaatgtgtgaataa 258
Query: 536 tattaacactttagcaaatgctaaaacttatttttatgtacacccaacacggacaactgt 595
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 257 tattaacactgtagcaaatgctaaaacttatttttatgtacacccaacacgaacaactgt 198
Query: 596 gctacattcaaatgaatggtttgcttaaggtatcaatagatttaatgaataacatctata 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gctacattcaaatgaatggtttgcttaaggtatcaatagatttaatgaataacatctata 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
