MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-533F13
Chromosome	10 (Build37)
Map Location	100,288,448 - 100,289,015
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042246 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Kitl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17311 MGI:96974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043208 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs

name	LOC100043211 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	EG667532 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667532 MGI:3646823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC670007 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	LOC235966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:235966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC667556 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043224 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043231 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC667580 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043239 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043242 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC100043244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC667607 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043247 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	EG213051 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213051 MGI:3643164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Tmtc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237500 MGI:3036255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930430F08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68281 MGI:1921197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700017N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66605 MGI:1913855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kitl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305266 GeneID:17311 MGI:96974
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kit ligand transcript_id : NM_013598.1

name	LOC100043208 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261130 GeneID:100043208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs product : hypothetical protein LOC100043208 transcript_id : XM_001480394.1

name	LOC100043211 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261132 GeneID:100043211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : hypothetical protein LOC100043211 transcript_id : XM_001480397.1

name	LOC670007 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261027 GeneID:670007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to ALY transcript_id : XM_001477845.1

name	LOC100043224 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261136 GeneID:100043224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480405.1

name	LOC100043224 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261138 GeneID:100043224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480409.1

name	LOC100043227 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261140 GeneID:100043227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480411.1

name	LOC100043227 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261142 GeneID:100043227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480412.1

name	LOC100043231 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261144 GeneID:100043231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480414.1

name	LOC100043231 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261146 GeneID:100043231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480417.1

name	LOC100043235 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261148 GeneID:100043235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480422.1

name	LOC100043235 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261150 GeneID:100043235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480425.1

name	LOC100043239 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261153 GeneID:100043239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480433.1

name	LOC100043239 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261155 GeneID:100043239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480438.1

name	LOC100043242 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261157 GeneID:100043242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480442.1

name	LOC100043242 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261159 GeneID:100043242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480446.1

name	LOC100043244 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261161 GeneID:100043244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : similar to ALY transcript_id : XM_001480452.1

name	LOC100043247 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261164 GeneID:100043247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to RNA and export factor binding protein 1-II, transcript variant 1 transcript_id : XM_001480457.1

name	LOC100043247 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261166 GeneID:100043247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to RNA and export factor binding protein 1-II, transcript variant 2 transcript_id : XM_001480459.1

name	Tmtc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348813 GeneID:237500 MGI:3036255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and tetratricopeptide repeat containing 3 transcript_id : NM_001033332.2

name	4930430F08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28201990 GeneID:68281 MGI:1921197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930430F08 gene transcript_id : NM_175128.1

name	1700017N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486960 GeneID:66605 MGI:1913855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700017N19 gene transcript_id : NM_001081246.1

name	Kitl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305267 GeneID:17311 MGI:96974
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005173 - stem cell factor receptor binding [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007281 - germ cell development [Evidence TAS]; GO:0050731 - positive regulation of peptidyl-tyrosine phosphorylation [Evidence IDA] codon_start : 1 note : mast cell growth factor; Steel factor; stem cell factor; cloud gray; grizzle-belly product : kit ligand protein_id : NP_038626.1

name	LOC100043208 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261131 GeneID:100043208
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480444.1

name	LOC100043211 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261133 GeneID:100043211
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480447.1

name	LOC670007 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261028 GeneID:670007
definition	codon_start : 1 product : similar to ALY protein_id : XP_001477895.1

name	LOC100043224 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261137 GeneID:100043224
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480455.1

name	LOC100043224 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261139 GeneID:100043224
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480459.1

name	LOC100043227 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261141 GeneID:100043227
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480461.1

name	LOC100043227 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261143 GeneID:100043227
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480462.1

name	LOC100043231 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261145 GeneID:100043231
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480464.1

name	LOC100043231 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261147 GeneID:100043231
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480467.1

name	LOC100043235 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261149 GeneID:100043235
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480472.1

name	LOC100043235 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261151 GeneID:100043235
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480475.1

name	LOC100043239 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261154 GeneID:100043239
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480483.1

name	LOC100043239 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261156 GeneID:100043239
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480488.1

name	LOC100043242 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261158 GeneID:100043242
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480492.1

name	LOC100043242 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261160 GeneID:100043242
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480496.1

name	LOC100043244 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261162 GeneID:100043244
definition	codon_start : 1 product : similar to ALY protein_id : XP_001480502.1

name	LOC100043247 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261167 GeneID:100043247
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_001480509.1

name	LOC100043247 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261165 GeneID:100043247
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_001480507.1

name	Tmtc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677476 CCDS:CCDS24150.1 GeneID:237500 MGI:3036255
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : transmembrane and tetratricopeptide repeat containing 3 protein_id : NP_001028504.1

name	4930430F08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201991 CCDS:CCDS24151.1 GeneID:68281 MGI:1921197
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68281 protein_id : NP_780337.1

name	1700017N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486961 GeneID:66605 MGI:1913855
definition	codon_start : 1 product : hypothetical protein LOC66605 protein_id : NP_001074715.1

name	LOC100042246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042246
definition	number : 2 pseudo : _no_value

name	LOC100042246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042246
definition	number : 1 pseudo : _no_value

name	LOC235966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:235966
definition	number : 1 pseudo : _no_value

name	LOC235966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:235966
definition	number : 2 pseudo : _no_value

name	LOC235966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:235966
definition	number : 3 pseudo : _no_value

name	EG667532 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261134 GeneID:667532 MGI:3646823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : predicted gene, EG667532 pseudo : _no_value transcript_id : XR_034683.1

name	LOC667556 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261135 GeneID:667556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to THO complex 4 pseudo : _no_value transcript_id : XR_034685.1

name	LOC667580 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261152 GeneID:667580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to THO complex 4 pseudo : _no_value transcript_id : XR_034691.1

name	LOC667607 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261163 GeneID:667607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to THO complex 4 pseudo : _no_value transcript_id : XR_034700.1

name	EG213051 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261029 GeneID:213051 MGI:3643164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG213051 pseudo : _no_value transcript_id : XR_035690.1

clone name	MSMg01-060A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-533F13.T7 (MSMg01no533_f13.b1)	MSMg01-533F13.TJ (MSMg01no533_f13.g1)
ACC	AG601290	AG601291
length	740	748
length of high quality (start - end)	569 (77 - 645)	479 (77 - 555)
definition	CHROMAT_FILE: MSMg01no533_f13.b1 PHD_FILE: MSMg01no533_f13.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:10:32 2005	CHROMAT_FILE: MSMg01no533_f13.g1 PHD_FILE: MSMg01no533_f13.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:10:32 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CCCTTTTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXCGCGGAATTCCATATTCTCACAATAGCAAGAAACTGCGAGCTTTA CTTCCAGAGAATTGAGGCACTCAAGTGCTGAAATATTACAACTTAAAGAT CTTTCTTCATGCCTCAAAACTTTCATAGTTACTTTATTATTTACACATTT TTTGATCTAATTTTTCTTTCCCCATATCTTTTAATTTCAAAAATATTTTG ATTAATTTTCTTTTTATTTCATGTATGGTTGTTTTGCCTGACTGTCTGTG TACCACATACATTCGGTGCTCACGGAAGCCATTGATTTCTATGGAACAGA AGGTACAGATGATTGTGAGCCACCACATGAGTGCTGGGAGTTGAACCCCA GTAACTCCAGAAAAGCAGCCATGGTTTTAATCACTGATGTATCTCTGAAG CTTCAGTGATGTAATTATTCCCACTCTTTGCTCTTGTTTTATGCTTTTTC ATGGCGCTCAGGACTCAAGGAGTTTATGATGATGTAGTTCAGGCCAGAAA TTAATATACTTTCCTGACATCTCTTCTTAAACTTCACAAGAAGGACTTTT CTATATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGNNTGTG TGTTTGTGTTTGTGCCTGTGATGTGTCTGTATGCCTTAATTAAGCATCTT GCATCCCACAACTCATAATCTATGAAGTTGCAAATCTCCT	NACAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXTATGTTTAGCTCTGTAGCCCATTT TTAGGAGGGTTATTTGATTCTCTGAAGTCTAACTTTTTGAATTCTTCATA TATATTGGATATTAGCCCTATATCGAATATAGGGTTGATAAAGATTTTTT CCCAATCTGTTGCCATTTTGTTCTATTGACAGTGTCGTTTGCCTTACAGA AGCTTTGCAACTTTATGAGGCCCTATTTGTCTACTGTTGATCTTAGAATA TAAGCCATTACTGATCTCTTCAGGAAATTTTTCCCTGTGCAACAATATCA ACCAACCAGACTCCCCAAACCTCCCAGAGACCAAACCACCAACTAAAGGG CACACATGGGGGGGACTCATGACTCCAGATACACGTGCAGCAGGGGATGA GCCCCGTTAGGCATTAATGGGAAGAGAGGCCCTTGGTCCTTCGAAGGCTC AATACCCAGTGTAGGGGAATACCAGGGTGGGGAGGTGAGAGTGGGTTGTA TGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTNTTTTTTT TTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTNTTNTT TTTTNNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTNTNN TTTTTTTTTTTTTTTNTTTNTTTTTTTTTTTTTTTTTTTTNNNTNTTN
quality values	Open. Hide. 6 8 6 9 9 9 9 7 7 6 6 6 7 9 11 11 17 8 15 7 7 7 12 15 22 28 29 30 27 25 37 37 37 37 34 22 13 18 14 16 16 21 12 8 8 8 8 8 13 21 18 18 19 19 19 28 34 47 44 23 17 17 19 30 30 22 22 17 23 30 28 12 12 12 18 13 14 16 27 32 47 42 47 47 47 48 48 42 42 42 36 42 54 54 54 54 59 59 59 57 57 57 47 42 36 34 37 42 48 48 47 47 47 48 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 50 57 57 68 57 50 57 57 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 57 57 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 54 57 57 59 59 59 57 57 57 54 54 57 59 68 68 68 68 68 59 59 59 59 57 57 59 68 68 68 68 68 57 57 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 59 54 57 59 48 48 48 57 57 57 57 54 57 59 59 59 68 68 68 68 57 57 57 57 57 57 59 59 59 59 59 59 59 48 48 48 48 48 48 57 57 57 57 57 57 57 59 59 57 57 48 48 48 48 59 59 59 47 34 34 28 20 25 34 34 41 41 41 40 41 37 37 39 39 48 57 48 43 43 36 36 36 37 37 37 37 32 39 34 34 34 28 24 24 34 37 35 35 37 37 37 37 37 39 47 59 48 48 48 48 48 48 57 57 48 47 40 37 35 35 40 40 48 48 59 59 48 48 48 57 57 48 48 48 48 37 37 37 37 36 37 39 31 22 22 28 28 36 39 43 43 36 37 39 43 43 48 48 44 44 57 57 57 57 57 57 53 50 48 48 48 48 48 59 59 59 59 59 59 59 59 59 59 59 47 37 32 32 32 32 32 37 23 23 3 0 0 3 14 9 10 10 10 15 16 14 15 15 15 24 21 25 18 9 8 8 8 10 10 12 20 16 16 11 12 12 18 16 19 10 11 8 8 8 8 7 9 9 9 13 17 17 23 11 11 11 16 18 13 6 6 6 10 10 10 9 8 8 8 8 10 13 13 6 6 6 6 6 7 10 11 15 28 28 31 28 24 21 21 12 16 11 15 11 12 12 13 11 8 8 8	Open. Hide. 0 3 9 11 10 10 9 9 9 9 19 19 21 17 19 32 27 25 31 28 31 32 32 32 32 30 27 28 37 31 26 23 12 7 7 7 7 7 9 18 11 15 15 23 21 30 25 22 19 21 11 11 10 23 23 41 39 39 30 19 13 10 9 10 10 12 11 28 28 34 19 10 10 10 11 19 39 44 41 47 50 50 50 50 50 50 50 59 59 59 59 39 35 16 15 17 18 23 25 30 29 30 25 26 19 17 14 14 21 18 24 30 39 39 37 33 33 33 33 33 37 37 37 29 26 24 28 30 30 41 42 37 39 37 37 37 47 59 29 22 22 24 23 23 28 28 17 17 20 32 32 36 38 38 42 42 36 34 34 34 34 32 34 22 23 22 30 32 33 33 33 24 21 18 19 11 9 11 21 22 27 32 39 39 37 32 37 37 37 37 37 37 37 37 37 47 53 59 59 59 59 59 57 57 57 50 53 53 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 57 68 68 68 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 52 62 44 44 43 52 52 43 62 52 62 62 62 62 57 57 52 57 52 59 57 57 57 57 52 52 57 57 52 52 57 57 52 52 59 59 68 68 68 68 59 59 57 57 57 59 57 57 57 59 59 68 68 68 68 68 68 57 57 52 52 52 57 57 59 59 52 52 43 52 59 59 59 59 54 54 54 54 59 59 59 57 59 59 59 68 68 57 57 57 57 57 57 50 50 50 50 50 43 59 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 59 59 57 57 57 43 40 46 57 57 57 57 48 48 57 59 47 35 35 44 42 47 48 48 48 48 48 57 57 48 48 43 43 43 47 59 48 48 48 48 48 59 59 59 57 57 48 34 34 23 28 34 43 57 57 57 53 53 48 48 48 48 39 37 33 33 33 22 27 16 19 19 14 24 22 37 32 23 17 23 23 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 3 0 3 15 15 10 12 10 9 9 3 0 3 11 10 10 10 16 17 15 12 9 8 12 8 15 10 10 10 21 15 14 11 11 14 17 20 24 23 12 10 9 14 9 10 16 16 12 13 8 3 0 3 0 3 3 0 3 6 6 10 10 3 0 0 3 10 10 19 23 10 10 10 8 8 6 8 8 6 7 13 15 15 16 16 14 11 8 3 0 3 6 7 7 7 6 6 6 7 8 9 12 10 10 3 0 3 0 0 3 7 7 9 7 10 9 9 6 6 6 6 6 9 3 0 3 9 3 0 3 12 12 21 13 8 8 8 13 13 9 9 9 9 9 11 11 11 12 3 0 0 0 3 0 3 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no533_f13.b1 MSMg01no533_f13.b1 CHROMAT_FILE:
MSMg01no533_f13.b1 PHD_FILE: MSMg01no533_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:32 2005
         (569 letters)



>mm_chr10_100288248_100289216
          Length = 969

 Score = 1091 bits (564), Expect = 0.0
 Identities = 567/568 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatagcaagaaactgcgagctttacttccagagaattgaggcactcaagtgctgaaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagcaagaaactgcgagctttacttccagagaattgaggcactcaagtgctgaaatat 260

                                                                       
Query: 61  tacaacttaaagatctttcttcatgcctcaaaactttcatagttactttattatttacac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaacttaaagatctttcttcatgcctcaaaactttcatagttactttattatttacac 320

                                                                       
Query: 121 attttttgatctaatttttctttccccatatcttttaatttcaaaaatattttgattaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttttgatctaatttttctttccccatatcttttaatttcaaaaatattttgattaat 380

                                                                       
Query: 181 tttctttttatttcatgtatggttgttttgcctgactgtctgtgtaccacatacattcgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctttttatttcatgtatggttgttttgcctgactgtctgtgtaccacatacattcgg 440

                                                                       
Query: 241 tgctcacggaagccattgatttctatggaacagaaggtacagatgattgtgagccaccac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctcacggaagccattgatttctatggaacagaaggtacagatgattgtgagccaccac 500

                                                                       
Query: 301 atgagtgctgggagttgaaccccagtaactccagaaaagcagccatggttttaatcactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgagtgctgggagttgaaccccagtaactccagaaaagcagccatggttttaatcactg 560

                                                                       
Query: 361 atgtatctctgaagcttcagtgatgtaattattcccactctttgctcttgttttatgctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtatctctgaagcttcagtgatgtaattattcccactctttgctcttgttttatgctt 620

                                                                       
Query: 421 tttcatggcgctcaggactcaaggagtttatgatgatgtagttcaggccagaaattaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcatggcgctcaggactcaaggagtttatgatgatgtagttcaggccagaaattaata 680

                                                                       
Query: 481 tactttcctgacatctcttcttaaacttcacaagaaggacttttctatattttgtgtgtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tactttcctgacatctcttcttaaacttcacaagaaggacttttctatattttgtgtgtg 740

                                       
Query: 541 tgtgtgtgtgtgtgtgtgtgtttgtgtg 568
           ||||||||||||||||||||| ||||||
Sbjct: 741 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information