Query= MSMg01no534_j19.b1 MSMg01no534_j19.b1 CHROMAT_FILE:
MSMg01no534_j19.b1 PHD_FILE: MSMg01no534_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:11 2005
(642 letters)
>mm_chr10_9975231_9976268
Length = 1038
Score = 1191 bits (616), Expect = 0.0
Identities = 632/640 (98%), Gaps = 6/640 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaatatcaggtcagcgatgcttgtctttggggagaggtgaaggctgatactaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gaattcagaatatcaggtcagcgatgcttgtctttggggagaggtgaaggctgatactaa 676
Query: 65 gtagttacagtggtctggtgaccaaatataaataaatataaataaatgtactgactctga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtagttacagtggtctggtgaccaaatataaataaatataaataaatgtactgactctga 616
Query: 125 agaccttggcacagacagtacaataacgagttgttttgacaagtcccaaaaatgtttctg 184
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agaccttggcacaga----acaataacgagttgttttgacaagtcccaaaaatgtttctg 560
Query: 185 tctctcctctttcctttaatttggcatctacttggcttcgtattgatttgttcctcattt 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 559 tctctcctctttcctttaatttggcatctacttggcttcgtattgatttattcctcattt 500
Query: 245 ctccagcaacaaaatttaccttcttccttgttttcaatattatactctcctgacagaggt 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctgcagcaacaaaatttaccttcttccttgttttcaatattatactctcctgacagaggt 440
Query: 305 tatttctcacgcctttagattctccctaaatgatttattacactttctttcttgtcctcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatttctcacgcctttagattctccctaaatgatttattacactttctttcttgtcctcc 380
Query: 365 attaatgttctttccagtggaaaaaatataaacaaaagcatacttaactggtgtgcatgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attaatgttctttccagtggaaaaaatataaacaaaagcatacttaactggtgtgcatgc 320
Query: 425 acgagcgt--acacacacacacatcacacacatacacatatttgtgtttcctcaattact 482
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 acgagcgtacacacacacacacatcacacacatacacatatttgtgtttcctcaattact 260
Query: 483 tagggagtaaaaaaggaagatagaactgtgtgtgcctcttttgaaagttatttccaagct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tagggagtaaaaaaggaagatagaactgtgtgtgcctcttttgaaagttatttccaagct 200
Query: 543 tgtccagaagacattttctccacgtccctgcctctaggcctgggtcacctattcctacta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgtccagaagacattttctccacgtccctgcctctaggcctgggtcacctattcctacta 140
Query: 603 taataggatagatgctgcatttgattcatgcttataaatg 642
||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 taataggatagatgctgcatttgattcatgcttataaatg 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1038
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1028
Effective search space: 649696
Effective search space used: 649696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_j19.g1 MSMg01no534_j19.g1 CHROMAT_FILE:
MSMg01no534_j19.g1 PHD_FILE: MSMg01no534_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:11 2005
(407 letters)
>mm_chr10_9817865_9818671
Length = 807
Score = 659 bits (341), Expect = 0.0
Identities = 374/385 (97%), Gaps = 4/385 (1%)
Strand = Plus / Plus
Query: 24 gttttgtttgttttgttttgttttgtttctgatgttgtttttgtgatcagtatttattca 83
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 224 gttttgtttgttttgttttgttttgtttctgatgttgtttttgtaatcagtatttattca 283
Query: 84 gtgtcagttagaattaagacagcaacccaagtcctgtgggaagataggaa-gtaagagta 142
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 284 gtgtcagttagaattaagacagcaacccaagtcctgtgggaagataggaaag-aagagta 342
Query: 143 tagtcccaacccttggaacctctttatttagcacagacaactttaggaaagaagctgggg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tagtcccaacccttggaacctctttatttagcacagacaactttaggaaagaagctgggg 402
Query: 203 gtgaccccagcaaggacactcttccaggtctgcagcac-atttgctcaacaagagttggc 261
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 403 gtgaccccagcaaggacactcttccaggtctgcagcaccatt-gctcaacaagagttggc 461
Query: 262 ccagcgacagtcttgagttactgtttctaaggtgaatctgagtaggctggaggaattcta 321
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 462 ccagcgacagtcttgagttactgtttctaagttgaatctgagtaggttggaggaattcta 521
Query: 322 gaaacagaaacatcagtggattttaaagtgattagtaagagtgtatgtgtgtgtgagtgt 381
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 522 gaaacagaaacatcagtggattttaaagtgattagtatgagtgtatgtatgtgtgagtgt 581
Query: 382 gtgtgagaatgtatatgtgagtgtg 406
|||||||||| ||| ||||||||||
Sbjct: 582 gtgtgagaatatatgtgtgagtgtg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
