Query= MSMg01no534_l12.b1 MSMg01no534_l12.b1 CHROMAT_FILE:
MSMg01no534_l12.b1 PHD_FILE: MSMg01no534_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:20 2005
(669 letters)
>mm_chr10_7649774_7650843
Length = 1070
Score = 1265 bits (654), Expect = 0.0
Identities = 666/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Minus
Query: 1 agctagggtgacatagtaacaccctgtctgaataagaggaggaaaagaaaaatactgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 agctagggtgacatagtaacaccctgtctgaataagaggaggaaaagaaaaatactgact 811
Query: 61 tttttaggctgatcaaatatgacatttataaattctttaaaaataaatcacatatcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tttttaggctgatcaaatatgacatttataaattctttaaaaataaatcacatatcaagt 751
Query: 121 attacttacctggcctataatatgatatatactacagcaacagtgtaacgtgtatgctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 750 attacttacctggcctataatatgatatatactacagcaacagtgtaacgtatatgctta 691
Query: 181 gataatttgattctctttttaggtttcaattggaaatcttcatttaggtcagaggattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gataatttgattctctttttaggtttcaattggaaatcttcatttaggtcagaggattct 631
Query: 241 ataacgtactataactttaaaagatggtagataacatcatccaactattctgactgcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ataacgtactataactttaaaagatggtagataacatcatccaactattctgactgcaca 571
Query: 301 tcagttttttatgggaaagacattatttcaaaataactcattgataatgtcagccaatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcagttttttatgggaaagacattatttcaaaataactcattgataatgtcagccaatcc 511
Query: 361 ac-aaagcagcatgagttagttagtattaagacatactggtagggagagagaaaaactgc 419
|| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 acaaaagcaacgtgagttagttagtattaagacatactggtagggagagagaaaaactgc 451
Query: 420 ctgcctttccattgaaccctggagaggctactgttctaacatctgacggtcagaggggtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctgcctttccattgaaccctggagaggctactgttctaacatctgacggtcagaggggtg 391
Query: 480 ttgatatgtatctagttctgttaaaatttgatgtttatgttcctaaaaattactaaaagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttgatatgtatctagttctgttaaaatttgatgtttatgttcctaaaaattactaaaagt 331
Query: 540 attcctccctaaaacagtgcagagctgatagggaaaataaaaaagagatacagcttttag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 attcctccctaaaacagtgcagagctgatagggaaaataaaaaagagatacagcttttag 271
Query: 600 aaatttgagttgtaaacatttttaaagctaagaaccttttacaaatatagtatagtttta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaatttgagttgtaaacatttttaaagctaagaaccttttacaaatatagtatagtttta 211
Query: 660 ttcatgttaa 669
||||||||||
Sbjct: 210 ttcatgttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1070
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1060
Effective search space: 698540
Effective search space used: 698540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_l12.g1 MSMg01no534_l12.g1 CHROMAT_FILE:
MSMg01no534_l12.g1 PHD_FILE: MSMg01no534_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:20 2005
(542 letters)
>mm_chr10_7508793_7509734
Length = 942
Score = 1021 bits (528), Expect = 0.0
Identities = 538/542 (99%), Gaps = 2/542 (0%)
Strand = Plus / Plus
Query: 1 tttgaatttcttctaaactagtcccactgagtgtcaacaccctgggactggtatttttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaatttcttctaaactagtcccactgagtgtcaacaccctgggactggtatttttga 260
Query: 61 gagaagccatactgcctttttcattttacttgtgtttttttcagagacttgtgggtctct 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gagaagccatactgcctttttcattttacttgtgtttttttcaga--cttgtgggtctct 318
Query: 121 ggtaaatgtcatggctggcagagagacagtctgtatgcagcaagaaggaaagccagctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtaaatgtcatggctggcagagagacagtctgtatgcagcaagaaggaaagccagctca 378
Query: 181 acatgacttacttagttggtgttggttcatacttctatagtctcataccaagcagtttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acatgacttacttagttggtgttggttcatacttctatagtctcataccaagcagtttgt 438
Query: 241 tttagatatatttaaatatgttacaatttgagaaaaaaatgttttctgataacagttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttagatatatttaaatatgttacaatttgagaaaaaaatgttttctgataacagttgtc 498
Query: 301 tcaattctgagcttacggtgtaatttcattgaaattctttcgcaaagtacatgtgacctc 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 499 tcaattctgagcttacggtgtaatttcattgaaattcttttgcaaagtacatgtgacctc 558
Query: 361 taccatgaagatgggttctatagcttgagtacctaggatctggcttggtctcagtcctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taccatgaagatgggttctatagcttgagtacctaggatctggcttggtctcagtcctac 618
Query: 421 agatgtttagagggcactaagctataaggtacatgtgacatctcttctaaggagggttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agatgtttagagggcactaagctataaggtacatgtgacatctcttctaaggagggttct 678
Query: 481 attgcctgagaaagataaaggtctagcgaaggagaatatgggataaatataatagtgtgg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttgcctgagaaagataaaggtctagcgaaggagaatatgggataaatataatagtgtgg 738
Query: 541 tg 542
||
Sbjct: 739 tg 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
