Query= MSMg01no535_b19.b1 MSMg01no535_b19.b1 CHROMAT_FILE:
MSMg01no535_b19.b1 PHD_FILE: MSMg01no535_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:50 2005
(697 letters)
>mm_chr10_24198305_24199401
Length = 1097
Score = 1301 bits (673), Expect = 0.0
Identities = 688/693 (99%)
Strand = Plus / Minus
Query: 5 gaattcattcctgggactgtttgcattctttcccagtgaacgccagggcagacatcagac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gaattcattcctgggactgtttgcattctttcccagtgaacgccagggcagacatcagac 838
Query: 65 tctatttataacagcagaggagatattcaacctttcagagcggtactcagaatcgaggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tctatttataacagcagaggagatattcaacctttcagagcggtactcagaatcgaggct 778
Query: 125 gctcgagagcgcgtgggtagaatctctacgtgccttttcccaacaagtgtgcattccctt 184
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 777 gctcgagagcgagtgggtagaatctctatgtgccttttcccaacaagtgtgcattccctt 718
Query: 185 tcggggtagaggtgaccccgtggcaagcttgggagaacctatctcaggaacaacatgtgg 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 717 tcggggtagaggtgaccccgtggcaagcctgggagaacctatctcaggaacaacatgtgg 658
Query: 245 cctagagatggaaggagcgggatggaaaccatacatgatgaagtgaaaaagatggtcttc 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 657 cctagagatggaaggagcgggatggaaaccatacatggtgaagtgaaaaagatggtcttc 598
Query: 305 cttgcgttgccgctgaactcggcaggtttacttcagtgccccaagagtaaacagagctgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cttgcgttgccgctgaactcggcaggtttacttcagtgccccaagagtaaacagagctgg 538
Query: 365 aatcacactgtcatgctgtgggttcatggaaaagtgcctgaggggctctaaatgctcttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aatcacactgtcatgctgtgggttcatggaaaagtgcctgaggggctctaaatgctcttg 478
Query: 425 tgtgctacctctcagcccttgagcactccgacttcagaaatccttactggggcatagtag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgtgctacctctcagcccttgagcactccgacttcagaaatccttactggggcatagtag 418
Query: 485 tgtctgagccttgtgtgagtgcagatagactgttctgcttgttcaagaggtaaggtagag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgtctgagccttgtgtgagtgcagatagactgttctgcttgttcaagaggtaaggtagag 358
Query: 545 gagagttcacactgaacatcatgatgtttcagatggctgggatcagaacacagaggtgag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gagagttcacactgaacatcatgatgtttcagatggctgggatcagaacacagaggtgag 298
Query: 605 taattgcagagctcagaaggctgaagcactggatcagctagagttggaagccagccttgg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 taattgcagagctcagaaggctgaagcactggatcagctagagttggaagccagccttgg 238
Query: 665 ccttagagcaacactcagcctcagcaaacagcc 697
||| |||||||||||||||||||||||||||||
Sbjct: 237 cctcagagcaacactcagcctcagcaaacagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_b19.g1 MSMg01no535_b19.g1 CHROMAT_FILE:
MSMg01no535_b19.g1 PHD_FILE: MSMg01no535_b19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:50 2005
(641 letters)
>mm_chr10_24040706_24041747
Length = 1042
Score = 955 bits (494), Expect = 0.0
Identities = 595/632 (94%), Gaps = 11/632 (1%)
Strand = Plus / Plus
Query: 1 ttatctgactcttactttattcctgtgaaagaggcaggtgacacactcaattaccccata 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 201 ttatctgactcttactttattcctgtgaaagaggcaggtgacacactcacttaccacata 260
Query: 61 tttactaaatatcaacataatcaattagtttattgaatatatcttaattgagagcacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttactaaatatcaacataatcaattagtttattgaatatatcttaattgagagcacaga 320
Query: 121 cagtatcag-aaaaaaattctcaaagttagagatatcgaggttctgctttaagaagagct 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtatcagaaaaaaaattctcaaagttagagatatcgaggttctgctttaagaagagct 380
Query: 180 gtgtgatcccatagacaaccaccaaatccagacactattgcatacgtcagcaagatttt- 238
||||||||||||| || |||| ||||||||||||||||| | ||||||||||||
Sbjct: 381 gtgtgatcccata---aa----caaacccagacactattgcatatgccagcaagattttc 433
Query: 239 ctgacaagaccctgatatagctgtctcttgtgaggctatgccagtgcctggcaaatacag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgacaagaccctgatatagctgtctcttgtgaggctatgccagtgcctggcaaatacag 493
Query: 299 aaatgggtgcttacagtcatctattggataaaacagagggcccccagtgaaggagctaga 358
||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 494 aaatgggtgcttacagttatctattggatggaacagagggcccccagcgaaggagctaga 553
Query: 359 gaaagtacccaaggacctagagggatctgcaaccctataggaggaacagcaatatgaact 418
|||||||||| |||| ||| |||| ||||||||||||||||||||||| |||||||||||
Sbjct: 554 gaaagtaccctaggagctaaaggggtctgcaaccctataggaggaacaacaatatgaact 613
Query: 419 aaccagtaccccc-agagcttgtgtctctagttgcatatgtagcagaggatggcctagtc 477
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaccagtaccccccagagcttgtgtctctagttgcatatgtagcagaggatggcctagtt 673
Query: 478 ggccatcaatgggaggagcggcccttggtcttgcgaagattttatgccccattacagggg 537
|||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 674 ggccatcaatgggaggagaggcccttggtcttgcaaagattttatgccccagtacagggg 733
Query: 538 aacgccaggtccaggaagcaggagttggtgggttggggagcagggcagggaggggggtat 597
|| |||||| ||||||||| ||||| |||||||||||||||||||||||||| ||| |||
Sbjct: 734 aatgccagggccaggaagcgggagtgggtgggttggggagcagggcagggagaggg-tat 792
Query: 598 agcggattttcatagaggaagctaggaaaggg 629
|| ||||||||| ||||| |||||||||||||
Sbjct: 793 aggggattttcagagagggagctaggaaaggg 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
