NNNNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCATAAACTAAAAACAAAACAAAGCACACACACACAAAA
CAACTTCTGTAGCTAAGGTTTTTGAGTGAATACTTGACCCCCAGAATGAA
TGAGAATTTCTACCACTATATATCTGACAGAGGATTATTTTCAGAACATA
TAACGAATTTAAAAAATAAAAATAAAACAAGCCCTTCAAACAAACTGCAT
TAAAACCAACTTAATCTTATCCCTGACTAGTTTATACATAAATGAGACTC
AGACTATGGTTACATTATTTGGCCTTGATAATTACTGGAGGTTTACACCC
ATGACTACCTCCCCAGTGGTGTACTCCAGATACCTACTGTTTCTCCTGGC
CACATACTCATGGTTCCTCTCCCCTCATGGCAGCTTCCTCCTTCCCTATC
TTTCTTCCTCTTTCCTCCTGTTTTCCTCCAACCAGGTCACTCCGTTGAAC
TTACCTCTAATATCTATAAAATTGGATACAGCCAAATAGTTTTAAATTAA
GGAACAAGGTTTACACAGCAAAAGTTTGTAACATGAGAAGTCACTCATAG
GCCTAGACCTTTGGGTATAAAATTTAGCATTACAATATATACAATAGACT
AAACCTCCACAATTCCCCTTTTGTGTCTAAATAAAATAGGTTCTTTTTCT
TATAATAATAAATAGCATACCCTANNGAACATTATGAAATTATTATGN

NTTTTTTCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCACAAGAACTTTGACA
AATATCTCATGGCTTTAGAAGTTCCACTGTCAGAGTAGATTTGGCATAGT
TGTGAAGAAATAAAACCACAACAGACTGAGAAAGGGTTGACTTTGGATAG
AGAGGAAGATGCTAAAGAGTGGGCTATGGCATCCAGTTATCTAGCATAAA
ATGAAAGAAAAGGAGTGTAGGTGGGGAGCTATTAGATTTCTTTTAAATAA
CACCAATTATGTTATTCAATGATGGGACTATCTCAGCTGTGGAAAATAAT
GAGGATAAAAATTGGAGAGAAGAAATAACAACCAAAGTCTTGGAAGGTTC
GAATCAAGAGGAATTCTGTGTTTATAACAGCATCAAGAAATATCAGGGCT
GGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCTGGAGGTCAG
GAGTTCAAATCCCAGCAACCACATGGAGGCTCACAACCATCTGTAAGGAG
ATTAGATGCCTTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACA
TATAATTAATAATAAATCTATTTTTAAAAAAAAAAAAGGAGATAGGAATG
GATCAATTCGCATTCTTCTACATGATAACCTCCAGTTGTGCCAGCACCAT
TTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTC
AAAGATCAA

Query= MSMg01no535_j11.g1 MSMg01no535_j11.g1 CHROMAT_FILE:
MSMg01no535_j11.g1 PHD_FILE: MSMg01no535_j11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:27 2005
         (590 letters)



>mm_chr10_10719096_10720085
          Length = 990

 Score =  884 bits (457), Expect = 0.0
 Identities = 472/477 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcacaagaactttgacaaatatctcatggctttagaagttccactgtcagagtagattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcacaagaactttgacaaatatctcatggctttagaagttccactgtcagagtagattt 260

                                                                       
Query: 61  ggcatagttgtgaagaaataaaaccacaacagactgagaaagggttgactttggatagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcatagttgtgaagaaataaaaccacaacagactgagaaagggttgactttggatagag 320

                                                                       
Query: 121 aggaagatgctaaagagtgggctatggcatccagttatctagcataaaatgaaagaaaag 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaagaagctaaagagtgggctatggcatccagttatctagcataaaatgaaagaaaag 380

                                                                       
Query: 181 gagtgtaggtggggagctattagatttcttttaaataacaccaattatgttattcaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtgtaggtggggagctattagatttcttttaaataacaccaattatgttattcaatga 440

                                                                       
Query: 241 tgggactatctcagctgtggaaaataatgaggataaaaattggagagaagaaataacaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 441 tgggactatctcagctgtggaaaataatgaggataaaaattggagagaagaaataacaag 500

                                                                       
Query: 301 caaagtcttggaaggttcgaatcaagaggaattctgtgtttataacagcatcaagaaata 360
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaagtcttggaaggctcgaatcaagaggaattctgtgtttataacagcatcaagaaata 560

                                                                       
Query: 361 tcagggctggagagatggctcagaggttaagagcactgactgctcttctggaggtcagga 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaggactggagagatggctcagaggttaagagcactgactgctcttctggaggtcagga 620

                                                                    
Query: 421 gttcaaatcccagcaaccacatggaggctcacaaccatctgtaaggagattagatgc 477
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gttcaaatcccagcaaccacatggaggctcacaaccatctgtaaggagatcagatgc 677


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)