Query= MSMg01no535_k04.b1 MSMg01no535_k04.b1 CHROMAT_FILE:
MSMg01no535_k04.b1 PHD_FILE: MSMg01no535_k04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:30 2005
(692 letters)
>mm_chr10_60722565_60723655
Length = 1091
Score = 1321 bits (683), Expect = 0.0
Identities = 686/687 (99%), Gaps = 1/687 (0%)
Strand = Plus / Plus
Query: 6 ggaattctacaactcccctcctctaaggcaatttgtagaaggaaactgttgtccatcagc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattctacaactcccctcctctaaggcaatttgtagaaggaaactgttgtccatcagc 265
Query: 66 ctttcgtggcagtgacaacatgtctgggaaaaatcaaggtaaaaagaaaaaaaaaaaaga 125
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 266 ctttcgtggcagtgacaacatgtctgggaaaaatcaaggtaaaaag-aaaaaaaaaaaga 324
Query: 126 tagggctggagagatggctcagtggttaagaacatgtattgttcttgcagaggacctggg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagggctggagagatggctcagtggttaagaacatgtattgttcttgcagaggacctggg 384
Query: 186 ttcaattcctagcacccacctcaggcagttcccaattgcttctaactccagctccagggg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaattcctagcacccacctcaggcagttcccaattgcttctaactccagctccagggg 444
Query: 246 atttctttaaaaagaaatattggctcatggtaggtttgggcgctactatttttgagttgg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttctttaaaaagaaatattggctcatggtaggtttgggcgctactatttttgagttgg 504
Query: 306 tggtggcagaggatatgtagttaaaaatagctgctcatctcatggtagccaggaagcaga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtggcagaggatatgtagttaaaaatagctgctcatctcatggtagccaggaagcaga 564
Query: 366 aagctggggaggggttagggtccttcaagggcttgcctccagtaacctaacttctgttag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagctggggaggggttagggtccttcaagggcttgcctccagtaacctaacttctgttag 624
Query: 426 tccccatcccttggtagcagcacaagttgcctttggtggaacattccagattctgaccat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccccatcccttggtagcagcacaagttgcctttggtggaacattccagattctgaccat 684
Query: 486 agcaccaatacgatgaacctttccttccctgccgtgcgactttcctggcaaaccgtggta 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcaccaatacgatgaacctttccttccctgccgtgcgactttcctggcaaaccgtggta 744
Query: 546 aggctccatgcagatgtgacacatctgagactcaacccaggctcggtggcctcttcaggt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aggctccatgcagatgtgacacatctgagactcaacccaggctcggtggcctcttcaggt 804
Query: 606 ctcagtttccacatctgaaaccaaagggttaggggaacaaaatgaaataggaagaggaga 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctcagtttccacatctgaaaccaaagggttaggggaacaaaatgaaataggaagaggaga 864
Query: 666 acgcccccacaggatttgaccctcagc 692
|||||||||||||||||||||||||||
Sbjct: 865 acgcccccacaggatttgaccctcagc 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1091
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1081
Effective search space: 737242
Effective search space used: 737242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_k04.g1 MSMg01no535_k04.g1 CHROMAT_FILE:
MSMg01no535_k04.g1 PHD_FILE: MSMg01no535_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:30 2005
(537 letters)
>mm_chr10_60879371_60880308
Length = 938
Score = 841 bits (435), Expect = 0.0
Identities = 458/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 73 aaaacaaaacaaaacaaaacaaaacaaaagatgagctctagggaccttgttcttggtgac 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 aaaacaaaacaaaacaaaacaaaacaaaagatgagctctagggaccttgttcttggtgac 708
Query: 133 aaatgccagcttcaaataccaaagtgccctcctggggagcaaggggaataattactggaa 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aaatgccagcttcaaataccaaagtgccctcctggggagcaaggggaataattactggaa 648
Query: 193 gctgaaggcccagctatagggaatcttgattcttggtggtttgagggtaacaggtcctta 252
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 647 gctgaaggcccagctatagggaatcttgattcttggtggtttgagggtgacaggtcctta 588
Query: 253 cctgcttgctat-ggaatttttgaaggtggaaaagaaaagctggaggtttgctggctgca 311
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cctgcttgctatgggagtttttgaaggtggaaaagaaaagctggaggtttgctggctgca 528
Query: 312 tcttctgcctgcggggcagagccctgggacatctcagtcactctccagacctgctgactt 371
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tctcctgcctgcggggcagagccctgggacatctcagtcactctccagacctgctgactt 468
Query: 372 tgtctgcccaagacagaattaaatgtctttggtttttctcaaagtaactgtcctcagtca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgtctgcccaagacagaattaaatgtctttggtttttctcaaagtaactgtcctcagtca 408
Query: 432 tatttcttgtttatgaggaaattcaatgtaacaaatatgccatacgcgtaaggcttaagg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 407 tatttcttgtttatgaggaaattcaatgtaacaaatatgccatacgcgtaaggcttaggg 348
Query: 492 taaggngtggtagggcaaggggtggtcgttctttcacgctgtataa 537
||||| ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 347 taaggggtggtagggcaaggggtggtcattctttcacgctgcataa 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 938
Length adjustment: 10
Effective length of query: 527
Effective length of database: 928
Effective search space: 489056
Effective search space used: 489056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
