NNAAGGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCACCATGTAGACCAACCTGGCCTTGAACTCAGAGATTTGC
CTGCCTCTGCAGGGATCAAAGGAGCACACCCCCACACATGGCCGCTAGTT
GTATTCAAGATAGACCATAAACCCATGATCCTTTAATTAGCTCTGTAAAG
ACCCCTTTTGAAAATATGTTCTTATTTTCAGGTTCTGGGTAGACTGATCT
TTGGGGGCAGTATTGATATTGTATCCCCTGAATAGCACCTTATACCCAAC
AATGAATATGGGAATCTACCCTTTAGCCTCCTGCCTGATCCTTCTGCAGG
TCTAGGGCAAGGCAACCCTTGGGCCTACAATCTACAGCTTGCCAGTTTGA
CAAGAGTCATTGGCTGAATCCAGGTTGCTCCAGGCTCATATGTATCTCCC
TCTAGGGTGTGGAGAGTCACATCATGGCTGATAAGCAACCTTTTCAGTGC
ATCCCCATTAGTGTCCCATGGAAGCTGGGAATAGCGCCACAAACCCCCTG
GCTTGAAGTTCTAGGGGTCAGGAGCCTGAAAATGAGTCTTCTGACAATGA
CCCCCCCCCCCAAAATGGGGGGGTGTTTCTCTGGAGGCTCTAGGGAGAAA
CTGCTTACGTCTTCTGCTGTTAGAGCACGCCTACGTGCCCTGACTTGCAG
CCTCTTCGTTGATATACAGAATAAATCTGTCCTCTGTCTCCGTGTCACAC
TGGCTTCCC

NNCCCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAATAAGGAAATAGAAACACTGA
AGAACTCCCAAAGAGAAACAAAGCTAGAGATGAGAATTTCAAGAATTCAA
AGTAGAAAACAAAAACAACCAGATTCAATGGAAAGCCTGACTGGCAAAAT
GGGTTGTGTAGAAGACAGGATATTTGGGTTTGAGTACAAGGGAAAATTGA
ATTATTAAAAGAAAATAATAAAAAAAAAACTCATGAATGGTATGGTATAT
GCAGGAACTCTGCTATACCATGCAAAGACAAAAATTTGCATATTGTGAAC
CTAAAATGTGGAGTTGAATTCCAGGTCAAAGGCATAGAGTATATCTTCAA
TAAAGGCATAAAAGAAAACTTCCCAGATCTAGAGGGAAAGATGCTAATTC
AGACACACAGGCACACAGAACGCCAAACAGATGGAGCGGGAGAAGAAACT
CCACACACTATATCATAGTTAAAACACTAAGCATATGGTGCTGGAGAGGT
GGCTCCACGGTTAAGAACACTGACTGCTCTTCCTAAGGTCCTGAGTTCAA
TTCCCAGCAACTACATGGTGGCTCACAACCATTTGTAATGGGATCCGATG
CCCTCTTGTAGTGTGTCTGGAGATAGCTACAGTGTACTTACTCATACAAA
TAAAACAAACAAATTTTAAAAATTTAAACATACTAAATAGAGAAGAAAAG
GGCCCATATAAAGACTGGTTCATC

Query= MSMg01no535_o15.b1 MSMg01no535_o15.b1 CHROMAT_FILE:
MSMg01no535_o15.b1 PHD_FILE: MSMg01no535_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:52 2005
         (617 letters)



>mm_chr10_93009313_93010328
          Length = 1016

 Score = 1180 bits (610), Expect = 0.0
 Identities = 613/614 (99%), Gaps = 1/614 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaccatgtagaccaacctggccttgaactcagagatttgcctgcctctgcaggg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ggaattcaccatgtagaccaacctggccttgaactcagagatttgcctgcctctgcaggg 845

                                                                       
Query: 64  atcaaaggagcacacccccacacatggccgctagttgtattcaagatagaccataaaccc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 atcaaaggagcacacccccacacatggccgctagttgtattcaagatagaccataaaccc 785

                                                                       
Query: 124 atgatcctttaattagctctgtaaagaccccttttgaaaatatgttcttattttcaggtt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atgatcctttaattagctctgtaaagaccccttttgaaaatatgttcttattttcaggtt 725

                                                                       
Query: 184 ctgggtagactgatctttgggggcagtattgatattgtatcccctgaatagcaccttata 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctgggtagactgatctttgggggcagtattgatattgtatcccctgaatagcaccttata 665

                                                                       
Query: 244 cccaacaatgaatatgggaatctaccctttagcctcctgcctgatccttctgcaggtcta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cccaacaatgaatatgggaatctaccctttagcctcctgcctgatccttctgcaggtcta 605

                                                                       
Query: 304 gggcaaggcaacccttgggcctacaatctacagcttgccagtttgacaagagtcattggc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gggcaaggcaacccttgggcctacaatctacagcttgccagtttgacaagagtcattggc 545

                                                                       
Query: 364 tgaatccaggttgctccaggctcatatgtatctccctctagggtgtggagagtcacatca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgaatccaggttgctccaggctcatatgtatctccctctagggtgtggagagtcacatca 485

                                                                       
Query: 424 tggctgataagcaaccttttcagtgcatccccattagtgtcccatggaagctgggaatag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tggctgataagcaaccttttcagtgcatccccattagtgtcccatggaagctgggaatag 425

                                                                       
Query: 484 cgccacaaaccccctggcttgaagttctaggggtcaggagcctgaaaatgagtcttctga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cgccacaaaccccctggcttgaagttctaggggtcaggagcctgaaaatgagtcttctga 365

                                                                       
Query: 544 caatgacccccccccccaaaatgggggggtgtttctctggaggctctagggagaaactgc 603
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 caatgacccccccccc-aaaatgggggggtgtttctctggaggctctagggagaaactgc 306

                         
Query: 604 ttacgtcttctgct 617
           ||||||||||||||
Sbjct: 305 ttacgtcttctgct 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1016
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1006
Effective search space:   610642
Effective search space used:   610642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)