Query= MSMg01no536_e05.b1 MSMg01no536_e05.b1 CHROMAT_FILE:
MSMg01no536_e05.b1 PHD_FILE: MSMg01no536_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:19 2005
(274 letters)
>mm_chr10_118473703_118474375
Length = 673
Score = 495 bits (256), Expect = e-144
Identities = 268/272 (98%), Gaps = 1/272 (0%)
Strand = Plus / Plus
Query: 1 aaaggaaggtaggaggagctactgttaaagaacggacaggaatttcatctccataaccac 60
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 aaaggaaggcaggaggagctactgttaaagaactgacaggaatttcatctccataaccac 260
Query: 61 actccatagatgctgcagcccctcccatcgaagaaccccatctttagtcttccacttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actccatagatgctgcagcccctcccatcgaagaaccccatctttagtcttccacttctc 320
Query: 121 cttacatcccccatttctctgtccagtcactctcctccctcccacattgttctaccacag 180
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 cttacatcccc-atttctctgtccagtcactctcctccctcccacattgtcctaccacag 379
Query: 181 tcttctgagcatagaaaagataacatcactaccgaatggtgtattggcaccagcctagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcttctgagcatagaaaagataacatcactaccgaatggtgtattggcaccagcctagga 439
Query: 241 acaccagcctttgaaccaggtctcatctttgg 272
||||||||||||||||||||||||||||||||
Sbjct: 440 acaccagcctttgaaccaggtctcatctttgg 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no536_e05.g1 MSMg01no536_e05.g1 CHROMAT_FILE:
MSMg01no536_e05.g1 PHD_FILE: MSMg01no536_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:19 2005
(103 letters)
>mm_chr10_118608524_118609026
Length = 503
Score = 168 bits (87), Expect = 7e-47
Identities = 99/103 (96%)
Strand = Plus / Minus
Query: 1 ctctgttggcaataacacaaccttgtacgtcttggtcaggtgtcttagctacacggattg 60
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 303 ctctgttggcaataacacaaccttatacatcttggtcaggtgtcttagctacacggattg 244
Query: 61 atcactgataaggaatgacatatatgtccagctagtgaatagc 103
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 243 atcactgataaggaatgacacagatgtccagctagtgaatagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
