Query= MSMg01no536_i17.b1 MSMg01no536_i17.b1 CHROMAT_FILE:
MSMg01no536_i17.b1 PHD_FILE: MSMg01no536_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:41 2005
(576 letters)
>mm_chr10_107868939_107869917
Length = 979
Score = 961 bits (497), Expect = 0.0
Identities = 549/575 (95%), Gaps = 17/575 (2%)
Strand = Plus / Minus
Query: 5 gaattccttacatttctttactgctggccctctgaaccacgaatccaaattaggtagtca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaattccttacattcctttactgctggccctctgaaccacgaatccaaattaggtagtca 515
Query: 65 ttttacctgttacacaataaatcaattgtcttgcacaactttcacagcgtatcagtgaca 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 514 ttttacctgttacacaataaatcaattgtcttgcacaagtttcacagcgtatcagtgaca 455
Query: 125 agaagagagggcaaatctctga----tggctatcctaaccacaccgggtcagtagtgtac 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 454 agaagagagggcaaatctctgatggctggctatcctaaccacaccgggtcagtagtgtac 395
Query: 181 gctttggctaacaagatctgctgcgacaccctcactgggatcaataccgttcgcagaacc 240
||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 394 gctgtggctaacaagatctgctgcgacaccatcactgggatcaataccgttcgcagaact 335
Query: 241 aggcttcattcaatacattctttagtttctgggtgctcgcgattttctttttcttttttt 300
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 334 aggcttcattcaatacattctttagtttctgggtgctcgagatttcctttttcttttttt 275
Query: 301 aaactagctctgcctctttttgtttattcatgcttgagaaacaataagacaggtgtttta 360
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 274 aaactagctctgcctctttttgtttattcatgcttgagaaacaataagacgggtgtttt- 216
Query: 361 ttgttgttgt-----------ttt-taagtggggacaggatggagtgtggggaccactgt 408
|||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 215 ttgttgttgttgttgttgctgtttataagtggggacaggatggagtgtggggaccactgt 156
Query: 409 caaaagcaaaaagcaacacctgaataaaccccaactagacaaacctactgattcaatgag 468
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 155 caaaagcaaaaagcaacacctgaataaaccccaactaaacaaacctactgattcaatgag 96
Query: 469 cgttaaggacataaagggctgttgcatggcttagaaagtgaatggctccaacaagtgttt 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 cgttaaggacataaagggctgttgcatggcttagaaagtgaatggctccaacaagtgttt 36
Query: 529 gctgacaggagcctgatatagctgtctcctgagag 563
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gctgacaggagcctgatatagctgtctcctgagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 979
Length adjustment: 10
Effective length of query: 566
Effective length of database: 969
Effective search space: 548454
Effective search space used: 548454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_i17.g1 MSMg01no536_i17.g1 CHROMAT_FILE:
MSMg01no536_i17.g1 PHD_FILE: MSMg01no536_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:41 2005
(558 letters)
>mm_chr10_107706415_107707372
Length = 958
Score = 1071 bits (554), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Plus
Query: 1 aaaagttttttgtgatgcaaaaaattgaaccctaaagacacttaagtgtcctctgtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagttttttgtgatgcaaaaaattgaaccctaaagacacttaagtgtcctctgtcaga 260
Query: 61 gctgcatacatctgcaacctcccatatttcttcataataattagtatatgaggctgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgcatacatctgcaacctcccatatttcttcataataattagtatatgaggctgaaga 320
Query: 121 gatggctcagtaggtaagagcactggctactcttccagaggactcaggtttgggttccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatggctcagtaggtaagagcactggctactcttccagaggactcaggtttgggttccaa 380
Query: 181 tagctatatcagaggttctcaacctgtgggtcgcaacccctttggaggggcttcaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctatatcagaggttctcaacctgtgggtcgcaacccctttggaggggcttcaaataa 440
Query: 241 ccctttcacaggggtcacctacagccatcagaaaacatagataattacattacaattcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctttcacaggggtcacctacagccatcagaaaacatagataattacattacaattcat 500
Query: 301 aacagtagcaaattacagttgtgaagtaacaacaaaagtaattttatgggtgagggttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagtagcaaattacagttgtgaagtaacaacaaaagtaattttatgggtgagggttac 560
Query: 361 cacatgggaactgttatatatacagcatttggaacactcagaaatactaatctacatggt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 cacatgggaactgttatatatacagcatttggaacgctcagaaatactaatctacatggt 620
Query: 421 ggctcacagtggtctctgactccagtccatgagatctgatgtgctcttctgacctttggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggctcacagtggtctctgactccagtccatgagatctgatgtgctcttctgacctttggg 680
Query: 481 cacagacatacatgtgcagaaaacacccatagatgtaaagcttttttcaaaattgtaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacagacatacatgtgcagaaaacacccatagatgtaaagcttttttcaaaattgtaaag 740
Query: 541 agtatgtgctgtaaagag 558
||||||||||||||||||
Sbjct: 741 agtatgtgctgtaaagag 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
