Query= MSMg01no537_p04.b1 MSMg01no537_p04.b1 CHROMAT_FILE:
MSMg01no537_p04.b1 PHD_FILE: MSMg01no537_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:28 2005
(685 letters)
>mm_chr10_8813419_8814503
Length = 1085
Score = 1280 bits (662), Expect = 0.0
Identities = 671/674 (99%)
Strand = Plus / Minus
Query: 5 gaattcaaagccagtctggactacagaatgaatttaagaccaaaagaagcaacttaataa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gaattcaaagccagcctggactacagaatgaatttaagaccaaaagaagcaacttaataa 874
Query: 65 aaccttgtctcaaaataaaaataaaaaaatcaagaaaagggctgggtctctacccagtgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aaccttgtctcaaaataaaaataaaaaaatcaagaaaagggctgggtctctacccagtgg 814
Query: 125 tagagcactggcctacaatacttgaaatactagtttcaaccactattactgaacatgtgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tagagcactggcctacaatacttgaaatactagtttcaaccactattactgaacatgtgt 754
Query: 185 taaagaagaatcacatttgagcaagacagagaagggaaaaagaattctaaggtcccaaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 taaagaagaatcacatttgagcaagacagagaagggaaaaagaattctaaggtcccaaga 694
Query: 245 aaatagggacctctagcctccatgtgtctgagtagaaactgctactttaaagtacaatta 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 693 aaatagggacctctagcctccatgtgtctgagtagaaattgctactttaaagtacaatta 634
Query: 305 ggctaaagttgtgtgtgtagtgtgtgtatacaggccttgttcagagagctaagtacatat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggctaaagttgtgtgtgtagtgtgtgtatacaggccttgttcagagagctaagtacatat 574
Query: 365 tcatgattatgctaagtgctccttaatttataggtaattctcttcaaagtatgcaatcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcatgattatgctaagtgctccttaatttataggtaattctcttcaaagtatgcaatcct 514
Query: 425 cctcttcctcaggctcttttaatctcctgaagatcagaggctccattctattcaacactc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cctcttcctcaggctcttttaatctcctgaagatcagaggctccattctattcaacactc 454
Query: 485 gaggctcagtaattaaatcaataaggaaagcacaccagatacttaaaaataattgtttaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaggctcagtaattaaatcaataaggaaagcacaccagatacttaaaaataattgtttaa 394
Query: 545 taagtgtttccaatgtcctatttaaaactccatgttcatgtgtcattctcaagcagactg 604
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 393 taagtgtttccaatgtcctatttaaaactccatgttcatgtgtcattttcaagcagactg 334
Query: 605 agctgagccaatgttcccattaaaagctccatgtggtcctaggacacacacacacacaca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agctgagccaatgttcccattaaaagctccatgtggtcctaggacacacacacacacaca 274
Query: 665 cacacacacacaca 678
||||||||||||||
Sbjct: 273 cacacacacacaca 260
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 7
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_p04.g1 MSMg01no537_p04.g1 CHROMAT_FILE:
MSMg01no537_p04.g1 PHD_FILE: MSMg01no537_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:28 2005
(672 letters)
>mm_chr10_8643499_8644570
Length = 1072
Score = 1141 bits (590), Expect = 0.0
Identities = 653/674 (96%), Gaps = 3/674 (0%)
Strand = Plus / Plus
Query: 1 agtcactgattctctctgtaccccaatgtaggacctcata-tgctcagactggcccccga 59
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 199 agtcactgattctctctgtaccccaatgcaggacctcatacagctcagactggcccccga 258
Query: 60 ctccttatatcgtcaagaatgaccttgaacttcgcgtc-tcctgcctctacctgccaaat 118
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 259 ctccttatatcgtcaagaatgaccttgaacttcgcatcttcctgcctctacctgccaaat 318
Query: 119 gtttggattatgggtgtgcaccaccgttcacagactgaaatgtttttggtcaaagcaact 178
| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 gcttggaatatgggtgtgcaccaccgttcacagactgaaatgtctttggtcaaagcaact 378
Query: 179 caattctagaggcagagaaaggggcacttgggtgcaagtgttagaaagaaaaggcaaagg 238
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 379 caattctagatgcagagaaaggggcagttgggtgcaagtgttagaaagaaaaggcaaagg 438
Query: 239 tgagacgaagtgtagccagagtagaattcaaatgtcgtatcatgttgattttaataagga 298
||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 439 tgagacgaagtgtagccagagtataattcaaatgtcatatgatgttgattttaataagga 498
Query: 299 agcagaaaaaggaggcagggttaagtgtgacgatgtcagatccacagcacagaagataat 358
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 499 aggagaaaaaggaggcagggttaagtgtgacgatgtcagatccacagcacagaagatgat 558
Query: 359 tggttcataacaaattgctgagtattttagagaaggtagcagagaggatctttcatgttt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggttcataacaaattgctgagtattttagagaaggtagcagagaggatctttcatgttt 618
Query: 419 cctatacaagaaaaggatacatagttgaagttatgaacatctaatacctggatattacac 478
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 619 cctatacaagaaaaggatacatagttgaagttatgagcatctaatacctggatattacac 678
Query: 479 attgcagctgcatagtgaaatgttacactctaatccactgatacctacaactatgatgtg 538
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttgcagctgtatagtgaaatgttacactctaatccactgatacctacaactatgatgtg 738
Query: 539 tctaaatatcaaaaatacagataggttttttagaaggaggcaggaaggaaaatgacacac 598
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 739 tctaaatatcaaaaatacagataggtttttt-gaaggaggcaggaaggaaaatgacacac 797
Query: 599 aaaagtaacagaaagaagaattctgaagactgaaggcagaaacaaactctcttggtttcc 658
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 798 aaaagtaacagaaagaagaattctgaagactgaaggcagaaacaaactctcctggtttcc 857
Query: 659 caaatttgctgata 672
||| ||||||||||
Sbjct: 858 caactttgctgata 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
