Query= MSMg01no538_h17.b1 MSMg01no538_h17.b1 CHROMAT_FILE:
MSMg01no538_h17.b1 PHD_FILE: MSMg01no538_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:09 2005
(683 letters)
>mm_chr10_90841667_90842748
Length = 1082
Score = 1290 bits (667), Expect = 0.0
Identities = 676/679 (99%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 5 gaattccagtgactcacagtttggttctgaagataacccagtttcctgaataactgagga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgactcacagtttggttctgaagataacccagtttcctgaataactgagga 264
Query: 65 atgggagatgaagaggcaccattcagagagctatccctgtgaacccagaaacgtaaataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgggagatgaagaggcaccattcagagagctatccctgtgaacccagaaacgtaaataa 324
Query: 125 aggccagagaagtaggaaaagttctttatctaaagcttcaagtaaaaaaaaaaattaacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 aggccagagaagtaggaaaagttctttatctaaagcttcaagtaaaaaaaaaa-ttaacc 383
Query: 185 acttaaaaatataattatacttcccaggtttctagcatgcaggccgtgctgggatttgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acttaaaaatataattatacttcccaggtttctagcatgcaggccgtgctgggatttgtc 443
Query: 245 cttgtagaaccatcttggcttccagactatcattatatttcaatttaactttcccaacaa 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 cttgtagaaccatcttggcttccagactatcattttatttcaatttaactttcccaacaa 503
Query: 305 aatccgttatcggttccagtgacctgttcattttctgcatgtgcagaattcaatgaagct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatccgttatcggttccagtgacctgttcattttctgcatgtgcagaattcaatgaagct 563
Query: 365 gttttaaatattttcttctttattaaacactcctctaaaatccataattcaggagacaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttttaaatattttcttctttattaaacactcctctaaaatccataattcaggagacaat 623
Query: 425 aaatagttgcatttatttctctacagctcagctctgcgaagccgactgtgaagtcagtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaatagttgcatttatttctctacagctcagctctgcgaagccgactgtgaagtcagtgg 683
Query: 485 ggtattctcacgctagccagtttttgttatcagctacacaacatgaaagaagattatatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggtattctcacgctagccagtttttgttatcagctacacaacatgaaagaagattatatt 743
Query: 545 ttgctgttaatgggagaaacggagggagaataaagaccctaagtattttaaaacactagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 744 ttgctgttaatgggagaaacggagggagaataaagaccctaagtattttaaaacactggt 803
Query: 605 ttgaattgcggcttgagatccaaatgggaaggatggggcaagttctgcgtggatctgtca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgaattgcggcttgagatccaaatgggaaggatggggcaagttctgcgtggatctgtca 863
Query: 665 cttaacttattgaggacaa 683
|||||||||||||||||||
Sbjct: 864 cttaacttattgaggacaa 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_h17.g1 MSMg01no538_h17.g1 CHROMAT_FILE:
MSMg01no538_h17.g1 PHD_FILE: MSMg01no538_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:09 2005
(507 letters)
>mm_chr10_90956592_90957498
Length = 907
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%)
Strand = Plus / Minus
Query: 1 tctagaagcttcagggtcagctagcctcatgtatgcagtgaggaacaagaagaaaccctt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 tctagaagcttcagggtcagctagcctcatgtatgcagtgaagaacaagaagaaaccctt 385
Query: 61 ttttcaaacaagcggtaaggataaggactgacgcctagggttgtcttctgtcctcgacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttcaaacaagcggtaaggataaggactgacgcctagggttgtcttctgtcctcgacac 325
Query: 121 atatgctatgatatgtacacacctgacatccgtgtttacacgtgcatctataatacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atatgctatgatatgtacacacctgacatccgtgtttacacgtgcatctataatacacac 265
Query: 181 atacacagagggaggggacatgtgatttttgttggaaagatggggtttgggacctccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atacacagagggaggggacatgtgatttttgttggaaagatggggtttgggacctccatt 205
Query: 241 ccagaaaagcctgttggttttggagtcagtcaaaaatcccactcagtcacttcttatcta 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ccagaaaagcctgttggttttggagtcagacaaaaatcccactcagtcacttcttatcta 145
Query: 301 agagaactggagcttcatttagctctgacattaaaaatgatggtaatggcgcctaccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 agagaactggagcttcatttagctctgacattaaaaatgatggtaatggcgcctaccatt 85
Query: 361 attccagaaggaatgatggtaaggacaagaaatgatgcatgatacatagcaccatgcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 attccagaaggaatgatggtaaggacaagaaatgatgcatgatacatagcaccatgcctg 25
Query: 421 gcacaaattcagtgattaataaat 444
||||||||||||||||||||||||
Sbjct: 24 gcacaaattcagtgattaataaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
