Query= MSMg01no539_a20.b1 MSMg01no539_a20.b1 CHROMAT_FILE:
MSMg01no539_a20.b1 PHD_FILE: MSMg01no539_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:51 2005
(637 letters)
>mm_chr10_56856888_56857924
Length = 1037
Score = 721 bits (373), Expect = 0.0
Identities = 411/425 (96%), Gaps = 6/425 (1%)
Strand = Plus / Minus
Query: 5 aattcaattctc--ttctatataaatttaccctactgtcaagcatccctgcacccaactc 62
|||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 422 aattcaattctcagt--tatataaatttaccctactatcaagcatccctgcacccaactc 365
Query: 63 tatatctattctcagaccactctaataatgtgagtttattttcaccttttaatatttact 122
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 364 tgtatctattctcagaccactctaataatgtgagtttattttcaccctttaatatttact 305
Query: 123 tacttcttattcacctctttaagatgaggggggaagtattggttttacttcccaaagtga 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tacttcttattcatctctttaagatgaggggggaagtattggttttacttcccaaagtga 245
Query: 183 gatatagaattagtgccttagtagaaatttctggaggagt-ttcttgtttgtttgtttgt 241
| | ||||||||||||||||||| |||||||||||||||| || ||||||||||||||||
Sbjct: 244 ggtttagaattagtgccttagtaaaaatttctggaggagtatt-ttgtttgtttgtttgt 186
Query: 242 ttgttttgtcccccatgaaggaactagagaaagtacccaaggagctgaaggggtttgcag 301
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 185 ttgttttgtcccccatgaaggaactagagaaagtacccaaggagctgaagggatttgcag 126
Query: 302 ccccataggaagaacaacaatataaactaaccaatacccccagatcttcctgggattaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ccccataggaagaacaacaatataaactaaccaatacccccagatcttcctgggattaaa 66
Query: 362 ccaccaaccaaagaaaacacatggtaggactcatggctctagttgcatatgtagcagagg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ccaccaaccaaagaaaacacatggtaggactcatggctctagttgcatatgtagcagagg 6
Query: 422 atggc 426
|||||
Sbjct: 5 atggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_a20.g1 MSMg01no539_a20.g1 CHROMAT_FILE:
MSMg01no539_a20.g1 PHD_FILE: MSMg01no539_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:52 2005
(656 letters)
>mm_chr10_56673163_56674218
Length = 1056
Score = 1222 bits (632), Expect = 0.0
Identities = 650/656 (99%), Gaps = 1/656 (0%)
Strand = Plus / Plus
Query: 1 tttgttcagttctgagccccattttttaatggtgttatttgattttctgaagtccacctt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 tttgttcagttctgagccccattttttaatggggttatttgattttctgaagtccacctt 260
Query: 61 cttgagttctttatatatgttggatattagtcccctatctgatttaggataggtaaagat 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgagttctttatatatgttgcatattagtcccctatctgatttaggataggtaaagat 320
Query: 121 cctttcccaatctgttggtggtctctttgtcttattgacggtgtcttttgccttgcagaa 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 cctttcccaatctgttggtggtctctttgtcttgttgacggtgtcttttgccttgcagaa 380
Query: 181 actttggagtttcattaggtcccatttgtcaattctcgatcttacagccttgactctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttggagtttcattaggtcccatttgtcaattctcgatcttacagccttgactctttc 440
Query: 241 taattgatggcatgtatatcccatgcctgtttgtctgatatttttgtgtgagctgtttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattgatggcatgtatatcccatgcctgtttgtctgatatttttgtgtgagctgtttgt 500
Query: 301 tttgtatgtatgagtgtgcacatataagtatgagagcacgcatgcctgtgcacccatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgtatgtatgagtgtgcacatataagtatgagagcacgcatgcctgtgcacccatata 560
Query: 361 atgaggccaaagaaggatgctgagtgtctttttgcatcatcctccatcatatttctttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgaggccaaagaaggatgctgagtgtctttttgcatcatcctccatcatatttctttga 620
Query: 421 gataatatcttcacaaaacttgaagtttccttttcattggttaggctagctagtcagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gataatatcttcacaaaacttgaagtttccttttcattggttaggctagctagtcagtga 680
Query: 481 gatctgttacctccttccgttctgggcttacaagaacacagtcatatcttccctcccccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatctgttacctccttccgttctgggcttacaagaacacagtcatatcttccctcccccc 740
Query: 541 ccccattgttcttttttttttattagatattttctttataaacttttcaaatgctatccc 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccccattgttcttttttttt-attagatattttctttataaacttttcaaatgctatccc 799
Query: 601 aaaagttccctataccctccccctgccctgctcctctacccactcactcctgcttc 656
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 800 aaaagttccctataccctccccccgccctgctcctctacccactcactcccgcttc 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
