Query= MSMg01no539_j23.b1 MSMg01no539_j23.b1 CHROMAT_FILE:
MSMg01no539_j23.b1 PHD_FILE: MSMg01no539_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:38 2005
(615 letters)
>mm_chr10_20715335_20716349
Length = 1015
Score = 1174 bits (607), Expect = 0.0
Identities = 613/615 (99%)
Strand = Plus / Minus
Query: 1 gaaaaaggcagtgacaaagtatgtttcaaagtattaagatatattttacaatgtattgtg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 815 gaaaaaggcagtgacaaagtatgtttcaaaatattaagatatattttacaatgtattgtg 756
Query: 61 aattataattgtgaattaaaatgttctaagtggagtaaaaaacagaactgcaaactctgg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 755 aattataattgtgaattaaaatattctaagtggagtaaaaaacagaactgcaaactctgg 696
Query: 121 tgtttgtttctatggtgccctgttaacattttatacaaactcttggactccaagcagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgtttgtttctatggtgccctgttaacattttatacaaactcttggactccaagcagcca 636
Query: 181 aatcagcaccctcctatgctgttagcacctctagttctatgaggagttgcgcatttacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aatcagcaccctcctatgctgttagcacctctagttctatgaggagttgcgcatttacag 576
Query: 241 tctgcagacatagtcacaaagtgtactagactacactccaaacagaaactgctgggaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctgcagacatagtcacaaagtgtactagactacactccaaacagaaactgctgggaagt 516
Query: 301 tcttcagctcccccacccccaccaggagatctgcttaagacatatgcctttctcactgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tcttcagctcccccacccccaccaggagatctgcttaagacatatgcctttctcactgta 456
Query: 361 aaacagttggtgatagatgattttggattatccttcaagctgtatgcttgtaactatctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaacagttggtgatagatgattttggattatccttcaagctgtatgcttgtaactatctg 396
Query: 421 caggttaccacgttacttttaggttctggttagagaccatgctgtaattagacagcccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 caggttaccacgttacttttaggttctggttagagaccatgctgtaattagacagcccta 336
Query: 481 tttctgcattgtatcatttttcttctttataccaatgtactttgtatgtttaaaacttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttctgcattgtatcatttttcttctttataccaatgtactttgtatgtttaaaacttag 276
Query: 541 gtctgatctaacctgctatgttaaagctcacaattttaatattcttatccataccctttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtctgatctaacctgctatgttaaagctcacaattttaatattcttatccataccctttc 216
Query: 601 atctctttctgagac 615
|||||||||||||||
Sbjct: 215 atctctttctgagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_j23.g1 MSMg01no539_j23.g1 CHROMAT_FILE:
MSMg01no539_j23.g1 PHD_FILE: MSMg01no539_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:38 2005
(645 letters)
>mm_chr10_20567929_20568970
Length = 1042
Score = 1168 bits (604), Expect = 0.0
Identities = 634/646 (98%), Gaps = 5/646 (0%)
Strand = Plus / Plus
Query: 1 aattcaacattcccaaacacacaaaaacggagctaaaaatattttcacttgtgaaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcaacattcccaaacacacaaaaacggagctaaaaatattttcacttgtgaaagaca 260
Query: 61 ggtcagagctcagaaacaagagaaaaagttctctaatgcctcaacccagcaggagcggaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ggtcagagctcagaaacaagagaaaaagttctctaatgcctcaacccagcaggagcagaa 320
Query: 121 cgataactcaaacaggagagctcataagtctcaaagctcgggctgttagtgtcattcaag 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cgataactcaaacaggagagctcatgagtctcaaagctcgggctgttagtgtcattcaag 380
Query: 181 gacagagtctagtccagcaatgtgtgttcacagtaagaataaaaactgggctccccagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagagtctagtccagcaatgtgtgttcacagtaagaataaaaactgggctccccagac 440
Query: 241 aaaatccaaatggcataaagcatcacagagatcctgaagggtctgaaacatctctgccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatccaaatggcataaagcatcacagagatcctgaagggtctgaaacatctctgccta 500
Query: 301 catgttcatagcagcagctggaaaggaggaaacagccctgccctaagggtcaaatgttat 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 catgttcatagcagcagctggaaaggaggaaacagccctgccctaaggatcaaatgttat 560
Query: 361 tgctgagcaacgggaggacctggactgaacagtggattgcagcggggcctgaattctctt 420
||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 tgctgagcaacgg----acccggactgaacagtggtttgcagcggggcctgaattctctt 616
Query: 421 ggtcaaagtgctctgaaaatgccaagctgaaaaagacaacactcaaaatattttagaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggtcaaagtgctctgaaaatgccaagctgaaaaagacaacactcaaaatattttagaata 676
Query: 481 gtgtgtcttgagggttctggtagatcacaggtagaaaccacctcagggggctccagaaaa 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 677 gtgtgtcttgagggttctggtagagcacaggtagaaaccacctcagggggctccagaaaa 736
Query: 541 -gattatcccctaggaaacaaattcataagtaaacggaggcagcatcatgaaaggcagtc 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agattatcccctaggaaacaaattcataagtaaacggaggcagcatcatgaaaggcagtc 796
Query: 600 cataggatataaggaaacagtcatgctggactcctatggggagggg 645
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 797 cataggatataaggaaacagtcatgctggactcctttggggagggg 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1042
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1032
Effective search space: 655320
Effective search space used: 655320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
