Query= MSMg01no540_f15.b1 MSMg01no540_f15.b1 CHROMAT_FILE:
MSMg01no540_f15.b1 PHD_FILE: MSMg01no540_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:36 2005
(658 letters)
>mm_chr10_3725371_3726428
Length = 1058
Score = 1249 bits (646), Expect = 0.0
Identities = 652/654 (99%)
Strand = Plus / Plus
Query: 5 gaattcaagttcatatgcacactgtataggacacagtgtgtaaatcgaggaaagagggaa 64
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagttcaaatgtacactgtataggacacagtgtgtaaatcgaggaaagagggaa 264
Query: 65 ccaaggtctgtctatcttccttgaatgcttctctaaaggatccacagttggtctccttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaggtctgtctatcttccttgaatgcttctctaaaggatccacagttggtctccttct 324
Query: 125 tgaatagcatgatccttgtgcaggacagcagtgtctaaatgccttcaggccaacaaagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaatagcatgatccttgtgcaggacagcagtgtctaaatgccttcaggccaacaaagga 384
Query: 185 ggatgtattctacctaacagtatctgcttcagcctcaccatccactgggtatctcagaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggatgtattctacctaacagtatctgcttcagcctcaccatccactgggtatctcagaat 444
Query: 245 tgaggaggtgtttagtatgagaaggagaaatagctgagtgcattaaatgccataattttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaggaggtgtttagtatgagaaggagaaatagctgagtgcattaaatgccataattttg 504
Query: 305 cttttcagatttgttatccttaggccaggaaacaggaacttgtatttgctgtcacagcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttttcagatttgttatccttaggccaggaaacaggaacttgtatttgctgtcacagcct 564
Query: 365 accctttagctttgtagccaggttaaagcctcaccactggctgatttttatgctcagggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accctttagctttgtagccaggttaaagcctcaccactggctgatttttatgctcagggt 624
Query: 425 agttgccatcagcctgtggttctttattatttcctgaagcttgtgctggttatttaaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agttgccatcagcctgtggttctttattatttcctgaagcttgtgctggttatttaaata 684
Query: 485 tagcaataaaaatacagaccttgaagatgagtttaaaagaacatagatgcccatctctat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagcaataaaaatacagaccttgaagatgagtttaaaagaacatagatgcccatctctat 744
Query: 545 tgttgttgttgctactgctatggttatttaattccctgtctcccagggtatcactgaccc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgttgttgttgctactgctatggttatttaattccctgtctcccagggtatcactgaccc 804
Query: 605 ctaatcagagggagctgacatctctatgtctcaaatggtgatggtgctagctgc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctaatcagagggagctgacatctctatgtctcaaatggtgatggtgctagctgc 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_f15.g1 MSMg01no540_f15.g1 CHROMAT_FILE:
MSMg01no540_f15.g1 PHD_FILE: MSMg01no540_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:36 2005
(575 letters)
>mm_chr10_3861406_3862380
Length = 975
Score = 389 bits (201), Expect = e-112
Identities = 212/219 (96%), Gaps = 6/219 (2%)
Strand = Plus / Minus
Query: 1 attgtattcagctgcttaagggcactggttacaataaaaaataactaggtacaagttatc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 300 attgtattcagctgcttaagggcactggttacaataaaaaataagtaggtacaagttatc 241
Query: 61 ctgtatataactcatgggtttaacagattgagatttttagtagcacaggaactacaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctgtatataactcatgggtttaacagattgagatttttagtagcacaggaactacaacca 181
Query: 121 acatttgaccaatgagatttcaggaaatttaaaagctgctgcttaaaaaaaaaaaaaaaa 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 180 acatttgaccaatgagatttcaggaaatttaaaagctgctgctt------aaaaaaaaaa 127
Query: 181 aaaaaacaagtaaagagacagcgtataaagacggagaaa 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aaaaaacaagtaaagagacagcgtataaagacggagaaa 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
