Query= MSMg01no540_n23.b1 MSMg01no540_n23.b1 CHROMAT_FILE:
MSMg01no540_n23.b1 PHD_FILE: MSMg01no540_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:18 2005
(664 letters)
>mm_chr10_95177668_95178730
Length = 1063
Score = 1093 bits (565), Expect = 0.0
Identities = 604/619 (97%), Gaps = 7/619 (1%)
Strand = Plus / Minus
Query: 5 gaattcttgtcttcaaagagacttttatgacacaagactgagaactaagcactgacttgg 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 613 gaattcttgtcttcaaagagacttttatgacacaaggctgagaactaagcactgacttgg 554
Query: 65 cttatggctatgaccgaggctctaggtccttcctcatttgttccctccttcccctagtcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 553 cttatggctatgaccgaggctctaggtccttcctcatttgttccctccttcccatagtcc 494
Query: 125 ctgctttcccccctcccccccccccccaacacacacacaccatgccaacattaacctgcc 184
||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 493 ctgctttcccccctctccccccccccc----cacacacaccatgccaacattaccctgcc 438
Query: 185 caagttaggagcattctgcttagctgatttgataaaacaaaacaaaaaaacccagtagac 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 437 caagttaggagcattctgcttagctgatttgataaaacaaaac-aaaaaacccagtagac 379
Query: 245 ctgggggagccagattaagcctgtttagatgctataaagtttacccattttaaagtacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctgggggagccagattaagcctgtttagatgctataaagtttacccattttaaagtacaa 319
Query: 305 agttcaatggttttagtatatttacaaggttgtaaaaccatcactgttacctaattctgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agttcaatggttttagtatatttacaaggttgtaaaaccatcactgttacctaattctgg 259
Query: 365 aacattccatgaacccccaaaagaaaatccatactcactagtggccattcccctttctta 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 258 aacattccatgaacccccaaaagaaaatccatactcactagtggccactcccctttctta 199
Query: 425 ttgtccgttaagcccctggaaaccacgaatttgctttctgtatctgtagatttacctgac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttgtccgttaagcccctggaaaccacgaatttgctttctgtatctgtagatttacctgac 139
Query: 485 ccaagcacgtcatataaatggattcgtattttaaaacaca-ccttttgacttgggttttt 543
||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 138 ccaagcacgtcttataaatggatccgtattttaaaacacagccttttgacttgggttttt 79
Query: 544 ctttcacttagcacaatgttttttgagttcatatgatttttagcaagtatcactacctca 603
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 78 ctttcacttagcacaatgttttctgagttcatatgatttttagcaagtatcactacctca 19
Query: 604 tacctaccttttatggctg 622
||||||| |||||||||||
Sbjct: 18 tacctac-ttttatggctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space: 688662
Effective search space used: 688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_n23.g1 MSMg01no540_n23.g1 CHROMAT_FILE:
MSMg01no540_n23.g1 PHD_FILE: MSMg01no540_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:18 2005
(643 letters)
>mm_chr10_95123263_95124305
Length = 1043
Score = 1199 bits (620), Expect = 0.0
Identities = 635/640 (99%)
Strand = Plus / Plus
Query: 4 gcttggggaaactacaggctgtggaggagtgggttccaggtctaatctgagagttatgaa 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcttggggaaactacaggctgcggaggagtgggttccaggtctaatctgagagttatgaa 263
Query: 64 cgtatatgtccagttaaggaactgagtttgcctgcaagggtttccatgctgtcttcactg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgtatatgtccagttaaggaactgagtttgcctgcaagggtttccatgctgtcttcactg 323
Query: 124 tgataggtggataaattccttcaaaggaaggaagagacaatggcagacagatgcacgaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgataggtggataaattccttcaaaggaaggaagagacaatggcagacagatgcacgaga 383
Query: 184 gtactgggagccattccagggctcacgttggagactctcatgtgtgggcttgtctgttca 243
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 gtactgggagccattccagggctcacgttggagactctcaggtgtgggcttgtctgttca 443
Query: 244 tctgtgtgttctttcttagagccagggaagcactgtgtgcactctgcgtctttcatctgc 303
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 tctgtgtgttctttgttagagccagagaagcactgtgtgcactctgcgtctttcatctgc 503
Query: 304 taggggacccagtatagggcaggatacagatggacacgtgagtgcagagatggagggagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taggggacccagtatagggcaggatacagatggacacgtgagtgcagagatggagggagg 563
Query: 364 gagcggcacaaggaaatgagaagcagaagaaaagatctgtgggccagaaaggcatttggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagcggcacaaggaaatgagaagcagaagaaaagatctgtgggccagaaaggcatttggg 623
Query: 424 agcatgtagggagacagactgagaatccacactgacccagcttctctcactgtgtaacct 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 agcatgtagggagacagactgaggatccacactgacccagcttctctcactgtgtaacct 683
Query: 484 tggggaatatacctgtccaggctccatttagaaaaccttgtacatgcaggttaaatgatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tggggaatatacctgtccaggctccatttagaaaaccttgtacatgcaggttaaatgatc 743
Query: 544 tatggtagatggtctttatgtggtttgtatggggttcaatgaaacattgtgtcctaggtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tatggtagatggtctttatgtggtttgtatggggttcaatgaaacattgtgtcctaggtt 803
Query: 604 agtcatgaaacattgtatcacaggccatttcattcctgtg 643
||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agtcatgaaacattgtatcacaggccatttcattcctgtg 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
