Query= MSMg01no541_d15.b1 MSMg01no541_d15.b1 CHROMAT_FILE:
MSMg01no541_d15.b1 PHD_FILE: MSMg01no541_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:47 2005
(513 letters)
>mm_chr10_16708418_16709329
Length = 912
Score = 880 bits (455), Expect = 0.0
Identities = 493/507 (97%), Gaps = 5/507 (0%)
Strand = Plus / Plus
Query: 4 ggaatt-aatatgtgtatgggcagaggaatacagctcagccaaccataccaatattactt 62
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatatgtggatgggcagaggaatacagctcagccaaccataccaatattactt 263
Query: 63 ggtattgaattattctgaaaaagcacccaactttcaaatgacaataaaacatttcccttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtattgaattattctgaaaaagcacccaactttcaaatgacaataaaacatttcccttt 323
Query: 123 atatttcaaatggtaataagctcaggtatttatgtggactatttgttcatctgacctctt 182
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 atatttcaaatggtaatacgctcatgtatttatgtggactatttgttcatctgacctctt 383
Query: 183 ccagtcaatatcatgtgcaacatcatggcacagtatcagtggtaaattgtgtatttaatc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccagtcaatatcatgtgcaacatcatggcacagtatcagtggtaaattgtgtatttaatc 443
Query: 243 atttatattattttcctattatagcagtcatgaatgatagcaacatttgcaattatcttt 302
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 atttatattattttcctattatagccgtcatgaatgatagcaacatttgcaattatcttt 503
Query: 303 actaggtgacttatattgctatataacaatgatttcagacattaaaatttgtggctgtaa 362
|||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 504 actaggtgac--atatccctatacaacaatgattttagacattaaaatttgtggctgtaa 561
Query: 363 tgattctccacttttcttgcttctctcagtgtatctagttataccataatttacaattac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgattctccacttttcttgcttctctcagtgtatctagttataccataatttacaattac 621
Query: 423 aatacttttaggtcctcattcttgtttctattttgatagtgtgtatgtgtgtgtgtgtgt 482
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 622 aatacttttaggtcctcattcttgtttctattttgattgtgtgt--gtgtgtgtgtgtgt 679
Query: 483 gtgtgtgtgtgtgtgtgtgtgtgtgta 509
|||||||||||||||||||||||||||
Sbjct: 680 gtgtgtgtgtgtgtgtgtgtgtgtgta 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_d15.g1 MSMg01no541_d15.g1 CHROMAT_FILE:
MSMg01no541_d15.g1 PHD_FILE: MSMg01no541_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:47 2005
(627 letters)
>mm_chr10_16895390_16896416
Length = 1027
Score = 1125 bits (582), Expect = 0.0
Identities = 594/598 (99%)
Strand = Plus / Minus
Query: 30 aaatcagtaaggctgtgagggacagggctgaagtatgaggtaagagagaacaagaggaaa 89
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 aaatcagtaaggctgtgagcgacagggctgaagtatgaggtaagagagaacaagaggaaa 968
Query: 90 taataatggttcacagaccctaaataagtgtttgcagaaacctatatggatgtctgtgtg 149
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 967 taataatggttcacagaccctaaataagtgtttgcagaaacctatacggatgtctgtgtg 908
Query: 150 caagagactttcctaggtcttttggtattgttttagtttattttttgttttgtttggttt 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 caagagactttcctaggtcttttggtattgttttagtttattttttgttttgtttggttt 848
Query: 210 cttttgtttttatttttcttggtgagacaagcagtttcaaagttgtcaactccctgtgca 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cttttgtttttatttttcttggtgagacaagcagtttcaaagttgtcaactccctgtgca 788
Query: 270 ttgatcatgtgactttctggcttttggcctggcatttgtcattttccctgtgagagcttt 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttgatcatgtgactttctggcttttggcctggcatttgtcattttccctgtgagagcttt 728
Query: 330 cagtacaggcaattcttactgaatatcttacttactatcgctttaatctacagctcattc 389
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 727 cagtacaggcaattcttactgaatatcttacttactatcgctttaatctatagctcattc 668
Query: 390 taaggcgtaggaaaaccaatgcagaaaccagagaagagtcttttagcacctaggcagaac 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 taaggcgtaggaaaaccaatgcagaaaccagagaagagtcttttagcacctaggcagaac 608
Query: 450 ctattctacactgttagaaaagtcaggccatcaatattttagcttcagctagatgttatc 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctattctacactgttagaaaagtcaggccatcaatattttagcttcagctagatgttatc 548
Query: 510 aaagttgcttcatctttgatcttaaattctctgccttctgtagtattagtgcagatgatt 569
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaagttggttcatctttgatcttaaattctctgccttctgtagtattagtgcagatgatt 488
Query: 570 tgcccctttctgaggctttgtcatagcctcaacattttcctttctgatttcctagatt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgcccctttctgaggctttgtcatagcctcaacattttcctttctgatttcctagatt 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
