CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGA
ATTCCTTAAGATTAACAAACTTCAGAATATACAGAACATATCAGGGTATG
TGGTCAGCATGACCCTGCTCTGAGTCAACTTATTTTTCTGTGTCAGTGAC
TGGCAGGCATATCATAGCAACAATATGAAATAGCTGTCAAGCATGGGACA
AAATGGCTACAGCTATGCTAAGGGGTAGGCTCCAACACCAGCCTTCTCTC
TAGTACCCACTTCTGGCTCAAATACTGCCTTTGACCATAGACCTTTATAT
CGAGATGCCAAGAAACATCAGCTCAGGAAGAAGGAATATTCTCATGGAAG
CCATGCCTGTACGAAGACAATGGGTGCTATGCCTTGGATCTGAAATGTCC
CAACAGCTCATGCTTGAACACTTGACTTTAGCTGTTGGTTTTTAATAGGT
GAAGTGTAACAGGAGGAAGTGTCTGACACCTGGAGTGGGTTGCTACAGGG
AATATCATCCCTGCTTCCTTCATGTTACATTCTCCTTGCTTCCTGGTCCA
CTGAGATGTGAGCAGCAGAAAGTGACCTGCTCCTGTCACTATGGAAAGGG
CTGCTCCTGCTACCGTGTCTTGTCCTTCATGATGGACTGTGCTCGTTGAA
GCCGAAAGCCAAAACAAACTCTTCTTTACTAAGTCCATTGATAAGAACTT
GGAACGTAAACACATACCACTACTTCTGAATGAATTCTTAGCTCTGTCTG
GCTACCCTAAGAGTCAG

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACCTTGATGAGATCATTCTTTCACAATA
AACATTTTAAAACTCAAAAACAAACAAACAAACAACCCCAGAGCCTAGAA
TTTATTCTGCTCACTCCAGGACAAATGCCATGTTTTCTCTTATATAAAAG
GTGGGGAGGGAGGCAAAGAGGGACTTCAGGGAGGGAGAGAATGGAAAGAG
ACAGTGATGGAATTTATATAAAATGAAAGCAGCTTGGAGGAGTAGTTGGT
GGATGGACAGAGACCACCAAGCAAGGGCAGGAGGGTGTGTGCATAAATTA
GAACTAAGTACAATGCCACAATATGTATCCCAATACCACGATAAAATGGT
ATACTAACTTACAAAATTAATTTAAAAATATTTTTAAATTAGTCTGTTTA
CATACAAGCATGTAAATAAGAGACTATTAATTATTAAGATGTATAAAATT
AAAAAAAAACACACACTAAAATGTCAATCATGACATTTTTAAAACATAAA
AGCGTATTCCAGTTGATGCAAAATTTAGGGGACGGACGGGATAGACTGTT
TTTAGTTCATTCCAGACTTTACTGTATTTGTTTATAGACACAAGTCTTCT
CTTGCAAGTTTTTGTTCCCTCTGCTGATTGAAAAAAAATAGAAAGTGTAG
AAAGTGAAAAAAACAACAAACCCCAAAACAGACAAATAAAACAAAACAAA
AACCCCCTTTN

Query= MSMg01no542_a06.g1 MSMg01no542_a06.g1 CHROMAT_FILE:
MSMg01no542_a06.g1 PHD_FILE: MSMg01no542_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:54 2005
         (621 letters)



>mm_chr10_68993436_68994460
          Length = 1025

 Score = 1004 bits (519), Expect = 0.0
 Identities = 537/545 (98%), Gaps = 5/545 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   accttgatgagatcattctttcacaataaacattttaaaactcaa----aaacaaacaaa 56
           |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||
Sbjct: 544 accttgatgagatcattctttcacaataaacattttaaaactcaaaaacaaacaaacaaa 485

                                                                       
Query: 57  caaacaaccccagagcctagaatttattctgctcactccaggacaaatgccatgttttct 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caaacaaccccagagcctagaatttattctgctcactccaggacaaatgccatgttttct 425

                                                                       
Query: 117 cttatataaaaggtggggagggaggcaaagagggacttcagggagggagagaatggaaag 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttatataaaaggtggggagggaggcaaagagggacttcagggagggagagaatggaaag 365

                                                                       
Query: 177 agacagtgatggaatttatataaaatgaaagcagcttggaggagtagttggtggatggac 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agacagtgatggaatttatataaaatgaaagcagcttggaggagtagttggtggatggac 305

                                                                       
Query: 237 agagaccaccaagcaagggcaggagggtgtgtgcataaattagaactaagtacaatgcca 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agagaccaccaagcaagggcaggagggtgtgtgcataaattagaactaagtacaatgcca 245

                                                                       
Query: 297 caatatgtatcccaataccacgataaaatggtatactaacttacaaaattaatttaaaaa 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 244 caatatgtatcccaataccacgataaaatggtatactaacttacaaaattaattttaaaa 185

                                                                       
Query: 357 tatttttaaattagtctgtttacatacaagcatgtaaataagagactattaattattaag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tatttttaaattagtctgtttacatacaagcatgtaaataagagactattaattattaag 125

                                                                       
Query: 417 atgtataaaattaaaaaaaaacacacactaaaatgtcaatcatgacatttttaaaacata 476
           |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgtataaaatttaaaaaac-cacacactaaaatgtcaatcatgacatttttaaaacata 66

                                                                       
Query: 477 aaagcgtattccagttgatgcaaaatttaggggacggacgggatagactgtttttagttc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aaagcgtattccagttgatgcaaaatttaggggacggacgggatagactgtttttagttc 6

                
Query: 537 attcc 541
           |||||
Sbjct: 5   attcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1025
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1015
Effective search space:   620165
Effective search space used:   620165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)