Query= MSMg01no542_p08.b1 MSMg01no542_p08.b1 CHROMAT_FILE:
MSMg01no542_p08.b1 PHD_FILE: MSMg01no542_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:09 2005
(622 letters)
>mm_chr10_82270678_82271698
Length = 1021
Score = 762 bits (394), Expect = 0.0
Identities = 424/436 (97%), Gaps = 7/436 (1%)
Strand = Plus / Minus
Query: 192 ggtcaccgccatggccagctagaggtacctttttttaaagtgcagtttagccggacagtg 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ggtcaccgccatggccagctagaggtacctttttttaaagtgcagtttagccggacagtg 962
Query: 252 gcggtgcacacctttaatcccagcactcgggaggcagaggcaggtagatttctgagttcg 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcggtgcacacctttaatcccagcactcgggaggcagaggcaggtagatttctgagttcg 902
Query: 312 aggccagcctggtctacaaagtgagttccatgacagccagggctatacagagaaaccctg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aggccagcctggtctacaaagtgagttccatgacagccagggctatacagagaaaccctg 842
Query: 372 tctcgaacaataaaaaaa----ataaaataaaaacataaaagtgcagtttatgctaagat 427
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tctcgaaaaataaaaaaataaaataaaataaaaacataaaagtgcagtttatgctaagat 782
Query: 428 tacaataatcacaattccagttgtatcgtgac-tttttttttctgcttaaagcatacatt 486
||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 781 tacaataatcacaattccagttgtatcttgacctttttttttctgtttaaagcatacatt 722
Query: 487 taactaaaaacatggacacactgtgtcattcccccccacccacacacccccagtctgttg 546
|||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 721 taactaaaaacatggacacactgtgtcatttccccc-acc-acacacccccagtctgttg 664
Query: 547 tgcttgtaagccaacacttccttagttacttacaatgaggcatctctggctgccccctgg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgcttgtaagccaacacttccttagttacttacaatgaggcatctctggctgccccctgg 604
Query: 607 caccattatctctgtt 622
|||| |||||||||||
Sbjct: 603 caccgttatctctgtt 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_p08.g1 MSMg01no542_p08.g1 CHROMAT_FILE:
MSMg01no542_p08.g1 PHD_FILE: MSMg01no542_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:09 2005
(635 letters)
>mm_chr10_82131855_82132889
Length = 1035
Score = 1062 bits (549), Expect = 0.0
Identities = 602/639 (94%), Gaps = 32/639 (5%)
Strand = Plus / Plus
Query: 1 acacaggatgaggccatagggtcagctaaaggttgtgtgtgtgtgcgtgtgtgtgtgtgt 60
||||||||||||||||||||||||||||||||| |
Sbjct: 225 acacaggatgaggccatagggtcagctaaaggt------------c-------------- 258
Query: 61 gtgtgtgtgtgtgtgtgtgtgtgtgtgtctgcctgagtgtctgcttgtgtgtgtatctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 --gtgtgtgtgtgtgtgtgtgtgtgtgtctgcctgagtgtctgcttgtgtgtgtatctgt 316
Query: 121 gtctgcatgtctacatgtg----tgtctgtctgtctgtatgagtgtgtgcacacagggat 176
||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 317 gtctgcatgtctacatgtgtgtctgtctgtctgtctgtgtgagtgtgtgcacacagggat 376
Query: 177 gcaggtgccgggagatgccaggaagccatcagctcccttgcagtgggagctataggtggt 236
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 377 gcaggtgccgggagatgccaggaagccatcagctcccttgcagagggagctataggtggt 436
Query: 237 ctgctgatgtaagcttattggaagtgtgagaacgctgtgagccgcttgctgtgagcttgc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgctgatgtaagcttattggaagtgtgagaacgctgtgagccgcttgctgtgagcttgc 496
Query: 297 cctaggtgctgggaaccagtctgtcttctgcaagagcaaccactctcttcaccactgagc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cctaggtgctgggaaccagtctgtcttctgcaagagcaaccactctcttcaccactgagc 556
Query: 357 ctttccccagccctctgaaggggagtttttatgttgagctgttgggagccatttttgttc 416
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctttccccagccctctgaagaggagtttttatgttgagctgttgggagccatttttgttc 616
Query: 417 taatagactggatcagtaagaggagggaaagggcagttctcatcagcaaaatgtggagag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 taatagactggatcagtaagaggagggaaagggcagttctcatcagcaaaatgtggagag 676
Query: 477 gctcagcagtccctcaggacggggccccaaaccaagagtctggacatgaactcggggtgg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gctcagcagtccctcaggacggggccccaaaccaagagtctggacatgaactcggggtgg 736
Query: 537 atgagaaacgctgatccccaggctcataccgtctgtgatgccccccagatagtatcgact 596
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 737 atgagaaacgctgatccccaggctcataccgtctgtgatgccccccggatagtatcgact 796
Query: 597 gatgaggttttgccctgttcattttagacagggtctcac 635
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 797 gatgaggttttgccctgttcatttaagacagggtctcac 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
