Query= MSMg01no543_l22.b1 MSMg01no543_l22.b1 CHROMAT_FILE:
MSMg01no543_l22.b1 PHD_FILE: MSMg01no543_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:12 2005
(668 letters)
>mm_chr10_110751482_110752546
Length = 1065
Score = 1234 bits (638), Expect = 0.0
Identities = 658/666 (98%), Gaps = 5/666 (0%)
Strand = Plus / Minus
Query: 4 ggaattccagccacaggagagaattcagatgggtttcataaccaactctggcaagcacat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ggaattccagccacaggagagaattcagatgggtttcataaccaactctggcaagcacat 806
Query: 64 ggcaaattccggtgagaaaggaagatgatgtcacagcaggagagaagagaaactcaccca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggcaaattccggtgagaaaggaagatgatgtcacagcaggagagaagagaaactcaccca 746
Query: 124 tattcccggggctggaaagtagaagcagattgctaatgagtccgccagccaagcacataa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tattcccggggctggaaagtagaagcagattgctaatgagtccgccagccaagcacataa 686
Query: 184 gagagctctctctctacacagtggccatctagcatcgcacagtagcatggaaaacagtgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagagctctctctctacacagtggccatctagcatcgcacagtagcatggaaaacagtgt 626
Query: 244 ccatgatagcagcagctgttagagatctaagccgaaggccactcctctaccagcgtgtgc 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccatgat---agcagctgttagagatctaagccgaaggccactcctctaccagcgtgtgc 569
Query: 304 gagatgggtgttcagagatggcatcgagtagctttaggagtatgggcttcccctggagaa 363
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 568 gagatgggtgttcagagatggcatggagtagctttaggagtatgggcttcccctggagaa 509
Query: 364 atggtgactttattccccacacatgctttcttcccctctgatgtccagcagtgtggtccg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atggtgactttattccccacacatgctttcttcccctctgatgtccagcagtgtggtccg 449
Query: 424 ttctacagctcacaggttttcagaagttctgagaaaggagatcaagtcacttgcagccat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttctacagctcacaggttttcagaagttctgagaaaggagatcaagtcacttgcagccat 389
Query: 484 ggtccagggattgaaggctgggagtccatgaaagcaatgcccgggaacaagagccacatc 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 388 ggtccagggattgaaggctgggagtccatgaaagcaatgcccaggaacaagagccacatc 329
Query: 544 tcagtgtctctcctctcagattccatccct-caggggtcccccagagtcttgctccgcag 602
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||
Sbjct: 328 tcagtgtctctcctctcagattccat-cctccaggggtcccccagagtcttgctctgcag 270
Query: 603 ttgctcctgcggggctcagcatccctgctttggctcttctgggagtcactttgttaagtg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttgctcctgcggggctcagcatccctgctttggctcttctgggagtcactttgttaagtg 210
Query: 663 atccag 668
||||||
Sbjct: 209 atccag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1065
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1055
Effective search space: 694190
Effective search space used: 694190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_l22.g1 MSMg01no543_l22.g1 CHROMAT_FILE:
MSMg01no543_l22.g1 PHD_FILE: MSMg01no543_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:12 2005
(614 letters)
>mm_chr10_110606444_110607457
Length = 1014
Score = 1141 bits (590), Expect = 0.0
Identities = 608/614 (99%)
Strand = Plus / Plus
Query: 1 cttatcctccagtctggtcttgttgctacaggaatgcccattcattccccaaaggtagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttatcctccagtctggtcttgttgctacaggaatgcccattcattccccaaaggtagtt 260
Query: 61 tttctttgtgtaaaacttagtgttttctgacgggcaggtggcgcacacctttgatcccag 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tttctttgtgtaaaacttagtgttttctgacgggcaggtggcgcatacctttgatcccag 320
Query: 121 cacttgggaagcagaggcagatgggtttctgagtttgaggccagcctggtctacagagtg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 cacttgggaagcagaggcagatgggtttctgagtttgagaccagcctggtctacagagtg 380
Query: 181 agttccaggacagccagggctatacagagaaaccctgtatcaaaacaaccaaaaaccaaa 240
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 381 agttccaggacagccagggctacacagaaaaaccctgtatcaaaacaaccaaaaaccaaa 440
Query: 241 aaacgaaacaacaacaacaacaaacccttagtgttttctgatagaagtgaatcttaattg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacaaaacaacaacaacaacaaacccttagtgttttctgatagaagtgaatcttaattg 500
Query: 301 tattagtgacccttgtcacagattacaaggaatgctggcttcctcagaatcgtgaagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattagtgacccttgtcacagattacaaggaatgctggcttcctcagaatcgtgaagctc 560
Query: 361 cagtgcccattggttctctatgacgctcagagcttcgttattctgtctggatctgagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgcccattggttctctatgacgctcagagcttcgttattctgtctggatctgagcag 620
Query: 421 cactctggtgcatataagatgcttgaggtagactttgagttttgaaatggtagaggctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactctggtgcatataagatgcttgaggtagactttgagttttgaaatggtagaggctgc 680
Query: 481 ttaccacaaatctgttttaaccaggagtggcagaacgtctgattctttaggctttttttt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 ttaccacaaatctgttttaaccaggagtggcagaacgtctgattctttaggcttttcttt 740
Query: 541 cttgtaaaattaaaaagaattgtttaattaagtgcacatgagtacaggtgcccatggaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgtaaaattaaaaagaattgtttaattaagtgcacatgagtacaggtgcccatggaga 800
Query: 601 ccagaaaggggaca 614
||||||||||||||
Sbjct: 801 ccagaaaggggaca 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
