NNNAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATCTAAGGTGTTATGAAGTTTTAATAATTCCTTTCAGAAT
GAAATGTGTGGGGAGAATATTTAAATATGACCTTTCGCTAGACCATTTTC
ATACTTTTTTTCTGTAGGTTGGTAGAATACCCTATCCTATATAGATATCA
TTTCTATGCATACTATGTGCCATTGGGAAAATGGTTAACCCATCTGTGTC
ATGTAATACAAATTACAAGGTCTTCCCTTAGATCTTTGTGATAACCCTAT
TGAGATGTCAATTGGTTATCGACCTGATGAAAATCTAGAATCACGGAAGA
GATAAGCACCTGGGCTCATCTGTGAGGGGTTATCTTGTTTAGATTAATTG
AGACCCACATTATATGTGTATGGTGGCCTGAGATCCTGGACTCAATTAAA
AGGAGAAATCTAGATGAGCATACACATCTATTGCACTCTGCTTCTTGGCT
ATGGACATAATTTAGCTGGCAGTCTCAAACTCCTCTCACAATAGCCTGTC
ACCATAACGTACTGTACCCTGTAACTATAAAGCAAACTTAAAACCATTCC
TTTTTTAATTTGCTCTTATCAGGCACCTGTCACACCAAAGAGACAAATAT
ATAGCTCTGAAACTGCCACTAGAGTTACTGTCACGTTCTCTGTANGAAAA
TGGAGACTCCTACTCCGAGAAGATACCCAAGCTCAGCCAAAAAGCAGTGC
AGTATTAGATT

TTCCACGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCAGCAATGATGTCAAAGTGTGGAC
ACTTTGCTCCTTCTTAGAATTGGGAAAAAACACCCATGGAAGGAGTTACA
GAGACAAAGTTTGGAGTGGTGACAAAAGGATGGACCATCTAGAGACTGCC
TTATCCGGGGATCCATCCCATAATCAGCTTCCAAACGCTGACACCATTGC
GCACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGT
GAGACTATGCTGGGGCCTAGCAAACACATAAGTGGATGCTCACAGTCAGC
TATTGGATGGATCACAGGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCA
AGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAACAACATTATGAACTA
ACCAGTACCCCCCAGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGAT
GGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTG
TATATGCCCCAGTACAAGGGAACGCCAGGGCCAAAAAAATGGGAATGGGG
TGGGTAGGGAAGTTGGGGGGGGAGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGNNNNNNGNNNNNGNGNGGNNNNNNNNNNNNNNNNNNNTNTNNNNNN
NNNNNNNGNGNNNNTTNNNNGNTTTGNNTTTNTTGTTTTTTTTTTTTTTT
TTTTTTGTGTTTTGTTTTGTTTGTG

Query= MSMg01no544_b05.b1 MSMg01no544_b05.b1 CHROMAT_FILE:
MSMg01no544_b05.b1 PHD_FILE: MSMg01no544_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:37 2005
         (646 letters)



>mm_chr10_86846201_86847246
          Length = 1046

 Score = 1147 bits (593), Expect = 0.0
 Identities = 626/637 (98%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttcatctaaggtgttatgaagttttaataattcctttcagaatgaaatgtgtggggagaa 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcatctaaggtgttatgaagttttaataattcctttcagaatgaaatgtgtggggagaa 267

                                                                       
Query: 68  tatttaaatatgacctttcgctagaccattttcatactttttttctgtaggttggtagaa 127
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 268 tatttaaatatgaccgttcgctagaccattttcacactttttttctgtaggttggtagaa 327

                                                                       
Query: 128 taccctatcctatatagatatcatttctatgcatactatgtgccattgggaaaatggtta 187
           |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | |||
Sbjct: 328 taccctatcctatatagataccatttctatgcatactatgtgccattgagaaaacgatta 387

                                                                       
Query: 188 acccatctgtgtcatgtaatacaaattacaaggtcttcccttagatctttgtgataaccc 247
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 acccgtctgtgtcatgtaatacaaattacaaggtcttcccttagatctttgtgataaccc 447

                                                                       
Query: 248 tattgagatgtcaattggttatcgacctgatgaaaatctagaatcacggaagagataagc 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tattgagatgtcaattggttatcgacctgatgaaaatctagaatcacggaagagataagc 507

                                                                       
Query: 308 acctgggctcatctgtgaggggttatcttgtttagattaattgagacccacattatatgt 367
           |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 508 acctgggctcatctatgaggggttatctggtttagattaattgagacccacattatatgt 567

                                                                       
Query: 368 gtatggtggcctgagatcctggactcaattaaaaggagaaatctagatgagcatacacat 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtatggtggcctgagatcctggactcaattaaaaggagaaatctagatgagcatacacat 627

                                                                       
Query: 428 ctattgcactctgcttcttggctatggacataatttagctggcagtctcaaactcctctc 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 628 ctattgcactctgcttcttggctatggacataatttagctggcagtctcaaactcctgtc 687

                                                                       
Query: 488 acaatagcctgtcaccataacgtactgtaccctgtaactataaagcaaacttaaaaccat 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 688 acaatagcctgtcaccataacgtactgtaccctgtaactataaagcaaacttaaaaccac 747

                                                                       
Query: 548 tccttttttaatttgctcttatcaggcacctgtcacaccaaagagacaaatatatagctc 607
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tccttttttaatttgctcttatcaggcacctgtcacaccaaagagacaaatatatagctc 807

                                                
Query: 608 tgaaactgccactagagttactgtcacgttctctgta 644
           |||||||||||||||||||||||||||||||||||||
Sbjct: 808 tgaaactgccactagagttactgtcacgttctctgta 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)