TTGGTGTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTGTGAATTCCTACACAGGGGACAAACATTTTAACCCCG
GTTGGAGTATAATTTAAAATCGACAAAACCTTACCCTGTTTCCCCAGTAG
ACTTGTAGATGAAAAGGGAGTCAATTATATACCGAGGACAGTGACTAGGA
CTACCTCAAATTACTTCTTCTTCTTCTTTTTTTTTTTTTTTGACAACTTT
CATAGGTTTGCCTGTTCTTCTTTACATCTGACTCCCTGCAATATCTTTAA
AACCAGATTGGCCTGCACGCTTCTGAATTGTAGAGGGAAATGGGGGAGGT
GGCAAACATATATTGTACCTTAATGGTGACCATGGGAAAATGCCTGCCTT
GGGGAGAAAAAAAATTACAAAATGCAGATTTAAGAAAGAAAAGAGTCTCT
TCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCATCCCTTTTTAATTTTCTCTTTTTTCGTTTGGGTTGGTC
TTTGAAACCAGTTTCTCTATTGTTCCCTTGGCTGTCCTGGGAATTTGCTC
TGTATTAAGGGCTGGCCTTTAAACTTAGACCTTACTTGC

ATGCAGCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAATCTTTTAAAATAT
ATTATCCTTTAAAACAGGCAATGGCATATTCTATGTATGTATCGTATGTA
TCGTATGTATCGTATGTATCGTATGTATCGTATATACTACATACTACACA
CCCACACACCCCACCCACCCCACCACACCCCCCCCCCCCTACTCACCCAC
CCCCCCCCCCCCCCCCCCCCTCCCCCCTCTCTCCCCACCTTCCCCCATAC
CCCCTCTCCCTCCCCTCTCCCCCCCCTATCCCATTCCCCTCCCCCACCAC
CCACGCTTCCTTCCCCTCTCCCCTCCCCCCCCCCCCCCCCACCCTCCCAC
CTCTCCCCCTCCCCCCCCCCCCCCCCATAACCCTACCCCCTCCCATCCCC
CCTTTCTCCACTTCTCCCCCCTCCCCCTTCCCCCTCCCCTTTACCCTCCT
CCCTTCCCCCCTCCCCTCGCCCCCCCTCCCCCAATCTCCCCCCTCCCCCC
TTCCCTCCCCCCTACCCCTCACCACCCCCCCTCCCCCCTCCTCCCCCCCC
CCCCCCTATTCCCTCCCCCCTCCCTCCCTTTCCCTTCTTCCCCCCCCTCC
TCCCCTCCACACCCCCCCCTCCACACACCCTCCCCCCCCGCCCCCCTCCT
CCCTCCTCTCCCCCCCTCCCCCCCTCCGCCACTCCACCCCCCCTCCCCCC
CTACTCTCCTCCCCCCCCCCCCCTCTCCCCCTCCCCTTCTCTCCACCCCT
TTCCTCCCCTCCTCACCTCCCCCCTACTTCTTTCCCTCACTCCCCCCCCC
CCCTCCCCTCCCCACTCTCCCCCCCCCCCACTCACCTCCTCCCCCCCCCC
TCTCTCCTCCCCTCCTCTCC

Query= MSMg01no544_e15.b1 MSMg01no544_e15.b1 CHROMAT_FILE:
MSMg01no544_e15.b1 PHD_FILE: MSMg01no544_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:54 2005
         (554 letters)



>mm_chr10_17275486_17276434
          Length = 949

 Score =  977 bits (505), Expect = 0.0
 Identities = 538/553 (97%), Gaps = 9/553 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcctgtgaattcctacacaggggacaaacattttaaccccggttggagtataatt 63
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ggaattcctgtgaagtcatacacaggggacaaacattttaaccccggttggagtataatt 534

                                                                       
Query: 64  taaaatcgacaaaaccttaccctgtttccccagtagacttgtagatgaaaagggagtcaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 taaaatcgacaaaaccttaccctgtttccccagtagacttgtagatgaaaagggagtcaa 474

                                                                       
Query: 124 ttatataccgaggacagtgactaggactacctcaaattacttcttcttcttctttttttt 183
           |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||
Sbjct: 473 ttatataccgaggacagtgactaggactacctcaaattacttcttcttc-----tttttt 419

                                                                       
Query: 184 tttttttgacaactttcataggtttgcctgttcttctttacatctgactccctgcaatat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tttttttgacaactttcataggtttgcctgttcttctttacatctgactccctgcaatat 359

                                                                       
Query: 244 ctttaaaaccagattggcctgcacgcttctgaattgtagagggaaatgggggaggtggca 303
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 358 ctttaaaaccagattggcctgcacgcttctgaagtgtagagggaaatgggggaggtggca 299

                                                                       
Query: 304 aacatatattgtaccttaatggtgaccatgggaaaatgcctgccttggggagaaaaaaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aacatatattgtaccttaatggtgaccatgggaaaatgcctgccttggggagaaaaaaaa 239

                                                                       
Query: 364 ttacaaaatgcagatttaagaaagaaaagagtctcttccttccttctttctttctttctt 423
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 238 ttacaaaatgcagatttaagaaagaaaagagtctcttccttctttctttctttctttctt 179

                                                                       
Query: 424 tctttctttctttctttctttctttctttctttctttctttctttctttctttcttt--t 481
           ||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||  |
Sbjct: 178 tctttctttctttctttctttctttctttctttctttctttc--tctttccttccttcct 121

                                                                       
Query: 482 tccttccttccttccttccttccttccttccttccttccttcctttctttctttctttct 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tccttccttccttccttccttccttccttccttccttccttcctttctttctttctttct 61

                        
Query: 542 ttctttctttctt 554
           |||||||||||||
Sbjct: 60  ttctttctttctt 48


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 158
Number of extensions: 57
Number of successful extensions: 57
Number of sequences better than 10.0: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 949
Length adjustment: 10
Effective length of query: 544
Effective length of database: 939
Effective search space:   510816
Effective search space used:   510816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)