Query= MSMg01no544_g08.b1 MSMg01no544_g08.b1 CHROMAT_FILE:
MSMg01no544_g08.b1 PHD_FILE: MSMg01no544_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:03 2005
(312 letters)
>mm_chr10_62451727_62452438
Length = 712
Score = 439 bits (227), Expect = e-127
Identities = 242/247 (97%)
Strand = Plus / Minus
Query: 66 aaataaataaataaataaataagaaaaaccgtttcctaacttgaaaaacagttttccacg 125
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 536 aaataaataaataaataaataaggaaaacagtttcctaacttgaaaaacagttttccacg 477
Query: 126 ttcatgatttcagagctagaatgcaccggcttgcggagtttctagttgttgtccagacag 185
|| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 476 tttatgatttcagagctagaatgcaccggctttcggggtttctagttgttgtccagacag 417
Query: 186 agtttctctgagggaaactatgaggtgagctggaatagtgaacaatgaacagcaggagga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agtttctctgagggaaactatgaggtgagctggaatagtgaacaatgaacagcaggagga 357
Query: 246 aaggggagcaaggctcaggtcaagagggtggtaaagcagcctgtgagcatcgagagatgg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaggggagcaaggctcaggtcaagagggtggtaaagcagcctgtgagcatcgagagatgg 297
Query: 306 gcagatg 312
|||||||
Sbjct: 296 gcagatg 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_g08.g1 MSMg01no544_g08.g1 CHROMAT_FILE:
MSMg01no544_g08.g1 PHD_FILE: MSMg01no544_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:03 2005
(474 letters)
>mm_chr10_62263966_62264841
Length = 876
Score = 886 bits (458), Expect = 0.0
Identities = 471/476 (98%), Gaps = 3/476 (0%)
Strand = Plus / Plus
Query: 1 attcctttgaaggttcaacctttatttatttttttaaaaagatttattattatatgtatg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 202 attcctttgaaggttcaacctttatttatttttt-aaaaagatttattattatatgtacg 260
Query: 61 tacactgtagctgtcttcagacactccagaaaagggtgtcagatcttgttagggatggtt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tacactgtagctgtcttcagacactccagaaaagggcgtcagatcttgttagggatggtt 320
Query: 121 gtgatccaccatatggttgctgggatttgaactcatgacctttggaagagcagtcggtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgatccaccatatggttgctgggatttgaactcatgacctttggaagagcagtcggtgc 380
Query: 181 tcttacccactgaggcatctcaccagcccctggttcaaccttcaaaaatcattaatttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttacccactgaggcatctcaccagcccctggttcaaccttcaaaaatcattaatttag 440
Query: 241 tacttaggatgtcaatatctgttcagagggcagatattccatcaataatacctagagagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacttaggatgtcaatatctgttcagagggcagatattccatcaataatacctagagagc 500
Query: 301 tcattagtcctggatgtttgatgttgcctcagagtggtgtttgtttatttattttatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcattagtcctggatgtttgatgttgcctcagagtggtgtttgtttatttattttatgca 560
Query: 361 t--gagtacattgtcgctgtacagatggttgtgagccttcatgtggttgttgggaattga 418
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgagtacattgtcgctgtacagatggttgtgagccttcatgtggttgttgggaattga 620
Query: 419 attttaggacttctgctcactgtggcccaaagatttattcattattataagtacac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attttaggacttctgctcactgtggcccaaagatttattcattattataagtacac 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 876
Length adjustment: 10
Effective length of query: 464
Effective length of database: 866
Effective search space: 401824
Effective search space used: 401824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
