NNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTAGGATCC
GCGGAATTCAGTAGCAGGTGCAGTAGTAGGAGCTAAGACAGCAAGATTTG
GCCTCATGAGAGCAAAGATGTACCAAGAAGCCAATGGAAAGACCAAGTGG
CTGCAGGGTACGGTGATGATCAAACCGGAAGAGCAAGAGGACAGCGTCTG
CACGAGACCTGTCTATTTGTGTGAAGTGACAAATTCTTCAACTTGCAAAT
GTAAAGACTGTACCTCCTTTGTTATTCTCACGGGATTATGAAACCGCTAC
ACCATGGCAAATCTTAAAAAGATAAGCATCCCCCAAATTGTTTCACAAAA
CTACCTTTTATGTCTCCCCCCCCCCAACTAAGGTAAACAGAAGTAATTAT
TTGAGACATGCGTTTTGTGATAGGTATCATTAAATATCAGCACAAGAAAC
ATCATGGAAGGCTGTAAAGTTCTCTAGACATTGTTTATCTTGTCACCGTA
GCAAACCAGATTCAGGTTTCGGCAGTGAACATAACTGTTCTTAACCATTT
ACATATTTTTTGGATTTTGAAGTCGTAGTTTAAAATTCCACCCATTAACT
TCTAGCAAAACTTAAAACACTTTTACTTACCATAATAGGTGCTAGCAGTC
ATTGACATAATCCAGAACGCTAGGGAAATGCAAATGATCAGGCTCAGTAT
TACTATATTGGTAATCATCTTTATATACCTTTTGCACGTAGTGTCGTCAC
TATCTG

GGGACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGAATTAAAGGTCACTCTTT
GTCTGCTCTGGAATTTGATCTGCTGAGCTGACTGAATTGCTGGATTTAAG
GTTAAGACTGAGATCCATGCGATGGCTCAGGAGAGAAAGGCATTGGCCAC
CAATCCAATCACCAGACCCCAAGTGGTGGAAGGAGAGAAACAACGCCTCT
AAACTTTCCTCTGACTGCTCTATACAAACATGTGAGCACACACACACATA
CACACACACACACATACACACATAGGGTGTGGTATACACAGATGGGCGGG
GAGGTTGGAAAGATATGAGAGGAGTTGGGTGGGGGAATGTAAACCATGAT
CAGCATATATTGTATGAAACAAATTTCATTCAATTTTTTAAACTAAGAAA
AAAAAAACATAAATAAAAGAAGCAACAAAGACCAGAGAGAAAACTGAGAG
GTTAAGTATATATTTCATTGTTGCAGAGGACCCAAGTTTGGCTCCCAGCA
CCCAATATCAGTATCTATGTATAAATCCCTCTCCAGGAGACCCATTTCCT
TCCTCTGACCTCCACATCCACCTACACTCACAAGCATACACCCACACACA
GATGTGTAGCTGAAATAAAATAAAACATTTTTAACAATAAAAAGAAAAAA
GAATATAACCACCAATGCTGGTAGGGATGGATACAGAAGGAAATCCTTAT
AGACTGA

Query= MSMg01no544_l22.b1 MSMg01no544_l22.b1 CHROMAT_FILE:
MSMg01no544_l22.b1 PHD_FILE: MSMg01no544_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:30 2005
         (693 letters)



>mm_chr10_114798081_114799174
          Length = 1094

 Score = 1268 bits (656), Expect = 0.0
 Identities = 680/688 (98%), Gaps = 1/688 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcagtagcaggtgcagtagtaggagctaagacagcaagatttggcctcatgagagc 66
           ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 207 gaattcagtagcaggagcagtagtaggagctaagacagcaagatttggcttcatgagagc 266

                                                                       
Query: 67  aaagatgtaccaagaagccaatggaaagaccaagtggctgcagggtacggtgatgatcaa 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaagatgtaccaagaagccaatggaaagaccaagtggctgcagggtacggtgatgatcaa 326

                                                                       
Query: 127 accggaagagcaagaggacagcgtctgcacgagacctgtctatttgtgtgaagtgacaaa 186
           |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 327 accggacgagcaagaggacagtgtctgcacgagacctatctatttgtgtgaagtgacaaa 386

                                                                       
Query: 187 ttcttcaacttgcaaatgtaaagactgtacctcctttgttattctcacgggattatgaaa 246
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttcttcaacttgcaaatgaaaagactgtacctcctttgttattctcacgggattatgaaa 446

                                                                       
Query: 247 ccgctacaccatggcaaatcttaaaaagataagcatcccccaaattgtttcacaaaacta 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccgctacaccatggcaaatcttaaaaagataagcatcccccaaattgtttcacaaaacta 506

                                                                       
Query: 307 ccttttatgtctcccccccccc-aactaaggtaaacagaagtaattatttgagacatgcg 365
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccttttatgtctcccccccccccaactaaggtaaacagaagtaattatttgagacatgcg 566

                                                                       
Query: 366 ttttgtgataggtatcattaaatatcagcacaagaaacatcatggaaggctgtaaagttc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttttgtgataggtatcattaaatatcagcacaagaaacatcatggaaggctgtaaagttc 626

                                                                       
Query: 426 tctagacattgtttatcttgtcaccgtagcaaaccagattcaggtttcggcagtgaacat 485
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tctagacattgtttatcttatcaccgtagcaaaccagattcaggtttcggcagtgaacat 686

                                                                       
Query: 486 aactgttcttaaccatttacatattttttggattttgaagtcgtagtttaaaattccacc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aactgttcttaaccatttacatattttttggattttgaagtcgtagtttaaaattccacc 746

                                                                       
Query: 546 cattaacttctagcaaaacttaaaacacttttacttaccataataggtgctagcagtcat 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 cattaacttctagcaaaacttaaaacacttttacttaccataataggtgctagcagtcat 806

                                                                       
Query: 606 tgacataatccagaacgctagggaaatgcaaatgatcaggctcagtattactatattggt 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tgacataatccagaacgctagggaaatgcaaatgatcaggctcagtattactatattggt 866

                                       
Query: 666 aatcatctttatataccttttgcacgta 693
           ||||||||||||||||||||||||||||
Sbjct: 867 aatcatctttatataccttttgcacgta 894


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1094
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1084
Effective search space:   740372
Effective search space used:   740372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)