Query= MSMg01no544_p07.b1 MSMg01no544_p07.b1 CHROMAT_FILE:
MSMg01no544_p07.b1 PHD_FILE: MSMg01no544_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:48 2005
(673 letters)
>mm_chr10_129008001_129009073
Length = 1073
Score = 1288 bits (666), Expect = 0.0
Identities = 669/670 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgtgactctaacaccattgatcactttttctgtgatgcatcgcctcttatcaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtgactctaacaccattgatcactttttctgtgatgcatcgcctcttatcaa 263
Query: 64 aatctcatgctcagatacatggtttttggagcagactgtcattgtttgtgcagtgctgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatctcatgctcagatacatggtttttggagcagactgtcattgtttgtgcagtgctgac 323
Query: 124 tttcatcattacattaatagtcgtgattctctcttacatatacattatccggacaattct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttcatcattacattaatagtcgtgattctctcttacatatacattatccggacaattct 383
Query: 184 cagattcccttctgctcatcagaggaagaaagcattttccacctgctcttctcacatgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagattcccttctgctcatcagaggaagaaagcattttccacctgctcttctcacatgat 443
Query: 244 tgtagtttccatcatgtatggcagctgcatttttatctatgtgacaccttctgccaaaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtagtttccatcatgtatggcagctgcatttttatctatgtgacaccttctgccaaaga 503
Query: 304 acaggtagatatcaataaaggagtatctatgctcaatacatctgttgcccctttgttaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acaggtagatatcaataaaggagtatctatgctcaatacatctgttgcccctttgttaaa 563
Query: 364 tccatttatttatactttgagaaataagcaagtgaaacaagcttttaatgatacagtaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tccatttatttatactttgagaaataagcaagtgaaacaagcttttaatgatacagtaaa 623
Query: 424 aaaattgcatacctcttacaccaataagaacatgttggatttaagcagttagttggctag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaattgcatacctcttacaccaataagaacatgttggatttaagcagttagttggctag 683
Query: 484 ttttcatttttctggaggttttaactatttcagccaggttaactttttcataatccttta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttttcatttttctggaggttttaactatttcagccaggttaactttttcataatccttta 743
Query: 544 catcttgatttggaaacccagttatgtcaggagccattgtaggataagttaataactagc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 catcttgatttggaaacccagttatgtcaggagccattgtaggataagttaataactagc 803
Query: 604 agatggtcttcctgagatgagtctaccttgggatacaatacatgatggatttgctccagt 663
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 804 agatggtcttcctgagatgagtctaccttggaatacaatacatgatggatttgctccagt 863
Query: 664 aggcaaggca 673
||||||||||
Sbjct: 864 aggcaaggca 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_p07.g1 MSMg01no544_p07.g1 CHROMAT_FILE:
MSMg01no544_p07.g1 PHD_FILE: MSMg01no544_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:48 2005
(584 letters)
>mm_chr10_129049105_129050092
Length = 988
Score = 1102 bits (570), Expect = 0.0
Identities = 582/588 (98%), Gaps = 4/588 (0%)
Strand = Plus / Minus
Query: 1 agtaattaaaattcatgtatgcatgcaataacaactagtaaaaaataagacatcaattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 agtaattaaaattcatgtatgcatgcaataacaactagtaaaaaataagacatcaattta 894
Query: 61 aaggagagggagaggaatatagaggaagccttggaagtaggaaagggaatggataaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 aaggagagggagaggaatatagaggaagccttggaagtaggaaagggaatggataaatgc 834
Query: 121 aattataatttcaaaaataatcaaaaatatttttaaaattaaaaagaaaggtcatgtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 aattataatttcaaaaataatcaaaaatatttttaaaattaaaaagaaaggtcatgtaca 774
Query: 181 gataaagctctgactctatccattgtaagacatttggggcagaaataaaataaattgcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gataaagctctgactctatccattgtaagacatttggggcagaaataaaataaattgcta 714
Query: 241 aatagttcaatgccagggaaaacattgattaaaacaattagtcatattttatctaaacaa 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aatagttcaatgccagggaagacattgattaaaacaattagtcatattttatctaaacaa 654
Query: 301 ttgggtgtaaattgtgtgcctacctggtagaaagcataggatggaaagaagagtcattag 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttgggtgtaaattgtgcgcctacctggtagaaagcataggatggaaagaagagtcattag 594
Query: 361 agaccaagtaactttgggatacatttaaaacatctaaggtaagatactcagttgtatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 agaccaagtaactttgggatacatttaaaacatctaaggtaagatactcagttgtatata 534
Query: 421 taatgaggatccaggaccaatgacttaagtgtggaaatcttagatattgaagaaaatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 taatgaggatccaggaccaatgacttaagtgtggaaatcttagatattgaagaaaatact 474
Query: 481 ttggaaaagtcaggcaacaagtactaaccatattaagtaaaaggaagattcaaaagtcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttggaaaagtcaggcaacaagtactaaccatattaagtaaaaggaagattcaaaagtcac 414
Query: 541 agtt----aatgaggggagggttggtgacttcaaagagagattttata 584
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agttaggcaatgaggggagggttggtgacttcaaagagagattttata 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 988
Length adjustment: 10
Effective length of query: 574
Effective length of database: 978
Effective search space: 561372
Effective search space used: 561372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
