Query= MSMg01no545_e06.b1 MSMg01no545_e06.b1 CHROMAT_FILE:
MSMg01no545_e06.b1 PHD_FILE: MSMg01no545_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:11 2005
(620 letters)
>mm_chr10_7408889_7409908
Length = 1020
Score = 1154 bits (597), Expect = 0.0
Identities = 612/617 (99%), Gaps = 1/617 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagtggcacaaaatcacagaaactatctgcagctgacagaaccacacctctgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccaagtggcacaaaatcacagaaactatctgcagctgacagaaccacacctctgc 263
Query: 65 tagagcatgaggtaaatcatagtcaacttgtttcagatagtcctaagccgccccatatcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagagcatgaggtaaatcatagtcaacttgtttcagatagtcctaagccgccccatatcc 323
Query: 125 acacagttgcgattgaaacaaaaacatataatactttctgtgtattttaaaagttattta 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acacagttgggattgaaacaaaaacatataatactttctgtgtattttaaaagttattta 383
Query: 185 ttgttacacataagtatactgtagctgtcttcagactcaccagaagaggctgtcagatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgttacacataagtatactgtagctgtcttcagactcaccagaagaggctgtcagatct 443
Query: 245 catatggatggttgtgagccaccatgtggttgctgggatttgaactcaggacctttggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catatggatggttgtgagccaccatgtggttgctgggatttgaactcaggacctttggaa 503
Query: 305 gagccatcttgccagcccagatttttttttttttaa-tttaagactattttcacacaaat 363
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 504 gagccatcttgccagcccagatttttttttttttaaatttaagactattttcacacaaat 563
Query: 364 aagcctttgtgtgtgctttataacctgggtcgaaaaacagttcctgagtttaaacacatt 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 564 aagcctttgtgtgtgctttataacctgggtcgaaaaacagttcctgagtttaaacacact 623
Query: 424 tggttacctacaaagcatatatgctcttccaacataaaaagtaagacctcaagagtgtta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tggttacctacaaagcatatatgctcttccaacataaaaagtaagacctcaagagtgtta 683
Query: 484 ttattagctacaaagtgagcccctactggttttagtcccttgaagggatgattgtctgga 543
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 684 ttattagctacaaagtgagcccctactgtttttattcccttgaagggatgattgtctgga 743
Query: 544 ggcaccgcaatatcagggtggatcctaaggatcaaactcagtaatcagtcttgacagcaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggcaccgcaatatcagggtggatcctaaggatcaaactcagtaatcagtcttgacagcaa 803
Query: 604 gcatcttcacctgctga 620
|||||||||||||||||
Sbjct: 804 gcatcttcacctgctga 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_e06.g1 MSMg01no545_e06.g1 CHROMAT_FILE:
MSMg01no545_e06.g1 PHD_FILE: MSMg01no545_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:11 2005
(582 letters)
>mm_chr10_7571446_7572431
Length = 986
Score = 1075 bits (556), Expect = 0.0
Identities = 577/586 (98%), Gaps = 4/586 (0%)
Strand = Plus / Minus
Query: 1 cagtccagtcagggatacatagtgaggccatgttttaagaaaaagaaatcatcttcctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 cagtccagtcagggatacatagtgaggccatgttttaagaaaaagaaatcatcttcctta 908
Query: 61 agcagaggataatggtacatgcctttaatcctagtaccgtgaaggtagaaacaggaagat 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 907 agcagaggataatggtacatgcctttaatcctagtaccttgaaggtagaaacaggaagat 848
Query: 121 caaaagccaatggttatccttggctatatattgaggctagcctgggctagataggacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 caaaagccaatggttatccttggctatatattgaggctagcctgggctagataggacctt 788
Query: 181 gctatggaagaaaggagggttgttttccttcatcttagagggctgatggatgtacagagg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 787 gctatggaagaaaggagggttgttttgcttcatcttagagggctgatggatgtacagggg 728
Query: 241 ttttaactttgaagtagatgaaagaatatagg----ggggcacctgtgtatggcttacaa 296
||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 727 ttttaactttgaagtagatgaaagaatgtggggggaggggcacctgtgtatggcttacaa 668
Query: 297 agcttcactggcccattgaggacagtgagtgggtgtgaggcatgagataagagctggaga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 agcttcactggcccattgaggacagtgagtgggtgtgaggcatgagataagagctggaga 608
Query: 357 aatcatgaagcaagtgtcactggttagacccaagctgctgctgcataaatgagaattgaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aatcatgaagcaagtgtcactggttagacccaagctgctgctgcataaatgagaattgaa 548
Query: 417 aatgaattcggggacgactagaaggtaccagaactcagtttctggatgtggaagggacaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aatgaattcggggacgactagaaggtaccagaactcagtttctggatgtggaagggacaa 488
Query: 477 agacagtatcagggacatccatgttcctcattatcacagtgagatgtggaagtgactgaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agacagtatcagggacatccatgttcctcattatcacagtgagatgtggaagtgactgaa 428
Query: 537 aaacgtttcaggtactttcaggttcctcatataaatgtgcaatgga 582
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaacgtttcaggtactttcaggttcctcatataaatgtgcaatgga 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 986
Length adjustment: 10
Effective length of query: 572
Effective length of database: 976
Effective search space: 558272
Effective search space used: 558272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
