XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTTAGAGAGAGAAGGAAGGCCCTTGTAGTGCCTTCACTGTCTAGCTGGA
ACTTCTTCTCCAGGTGCATGCCAACAAAACACTGTTACATTTTCCAACCT
GTCCTCTTCTGAGTTTGTATTAATAGTTGGTTGCTATAGGAATCTGTATA
CTACAAATTGTCTCTGACCAGTGGTCAACTGTCATATTTAGACTTCTCTG
GGATAATATGTCTGGGAGAGAGTATAGTGAACACTAGGGGAATTGTGTAA
CTTAGCATCACCACATAACTGTGTTTTGTTTGTTTGGTTTCGTTTGGAAG
AGAGAGAATAAAATAGTACTGTAGCATTCTTTTGGGAAGTACTCCTCCAT
TTTGATAATTGATGGTAGTGAGGATGCTACTCACTCCTTTGTTCCAATGA
TCTTGGTTATACCATTAGCACCTGCCCATCTTTAGTCAGGTGGATAGACA
AGTAACCTACCCAGAGCTTCTGAGATGTAAGCAGACCATTGGTGATGCTG
GTGGATGCATAATTGTGAGGGATTTTCTGTTTGTTTTGCTCTCTTCTCAT
TTTGTCTTCTCTTGTCTTTCTGTCTTGGCTTGCCTTGTCTTCTCCTCTCT
TCTTTTCTTCCCCTTCTTTGCTGGAGAATCATGTTATAAAGTGATAAAGT
CAAAATTTCAGAAACAGTTTTGCCCATCC

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAAACAGGTAAGGAACCTGGAGGCAGGAGCTGC
TACAGAGGCCATGAAGGATGCTGCTTACTGGCTTGCTCACAATGGCTTGC
TCAGCTTCCTTTCTTATAGAATGCAGGACCACCATCCCAAGGATGATACT
ACCCACAATGGGTTTCCTAATACAAAATTAACTCAACAAAATCAGCCCTC
CTGAATGCAAAAAATAAATGGGCTGAAAAAAAGAAATTAGGGAAACGACA
TCCTTCACAATAGCCACAAAGAATATAAAATATCTCAGTATAACTCTATC
CAAGAAAGTGAAAGACCTGTATGACAAGAACTTCATGTCTTTGAAGAAAG
GAATAGAAGATATTGGAGAATGGAAAGATCTCCTGTGCTAATGGATCTGT
AGGATTAACAAAAATGGCCACCTTACTGAAAACAATCTACAGATTCAATA
CAATTTCAATACAGATTCAACATTGCAACATTATCTTTTAAAGACCATGA
AAGAACAATTCTCAACTTTATACGGAAAAAATAAAACACCCAAAATATCC
AAAACAATCTTGAAAAATAAAAAACTTCTGGAGGTATCATCATCCCTGAT
CTCAAGCTGTACTACAGAGCAATAGTGGGGGGGGGGGACAAAAACAAAAT
AAACAACAACAACAACAACAACAAAAAACCCACATGTACTTGA

Query= MSMg01no546_m24.b1 MSMg01no546_m24.b1 CHROMAT_FILE:
MSMg01no546_m24.b1 PHD_FILE: MSMg01no546_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:13 2005
         (560 letters)



>mm_chr10_56392402_56393369
          Length = 968

 Score =  971 bits (502), Expect = 0.0
 Identities = 546/564 (96%), Gaps = 8/564 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttttagagagagaaggaaggcccttgtagtgccttcactgtctagctggaactt 64
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcttttagagagagaaggaaggcccttgtagtgccttcaccgtctagctggaactt 264

                                                                       
Query: 65  cttctccaggtgcatgccaacaaaacactgttacattttccaacctgtcctctt-----c 119
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||     |
Sbjct: 265 cttctccaggtgcatgccaacaaaacactgttacattttccaacgtgtcctctttacttc 324

                                                                       
Query: 120 tgagtttgtattaatagttggttgctataggaatctgtatactacaaattgtctctgacc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgagtttgtattaatagttggttgctataggaatctgtatactacaaattgtctctgacc 384

                                                                       
Query: 180 agtggtcaactgtcatatttagacttctctgggataatatgtctgggagagagtatagtg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtggtcaactgtcatatttagacttctctgggataatatgtctgggagagagtatagtg 444

                                                                       
Query: 240 aacactaggggaattgtgtaacttagcatcaccacataactgtgtttt--gtttgtttgg 297
           |||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||
Sbjct: 445 aacactaggggaattgtgcaacttagcatcaccacataactgttttttttgtttgtttgg 504

                                                                       
Query: 298 tttcgtttggaagagagagaataaaatagtactgtagcattcttttgggaagtactcctc 357
           ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 505 tttggtttggaagagagagaataaaatagtactgcagcattcttttgggaagtactcctc 564

                                                                       
Query: 358 cattttgataattgatggtagtgag-gatgctactcactcctttgttccaatgatcttgg 416
           ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||
Sbjct: 565 cattttgataattgatggtagtgattgacgctactcactcctttgttccaatgatcttgg 624

                                                                       
Query: 417 ttataccattagcacctgcccatctttagtcaggtggatagacaagtaacctacccagag 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttataccattagcacctgcccatctttagtcaggtggatagacaagtaacctacccagag 684

                                                                       
Query: 477 cttctgagatgtaagcagaccattggtgatgctggtggatgcataattgtgagggatttt 536
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttctgagacggaagcagaccattggtgatgctggtggatgcataattgtgagggatttt 744

                                   
Query: 537 ctgtttgttttgctctcttctcat 560
           ||||||||||||||||||||||||
Sbjct: 745 ctgtttgttttgctctcttctcat 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 968
Length adjustment: 10
Effective length of query: 550
Effective length of database: 958
Effective search space:   526900
Effective search space used:   526900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)