Query= MSMg01no546_p10.b1 MSMg01no546_p10.b1 CHROMAT_FILE:
MSMg01no546_p10.b1 PHD_FILE: MSMg01no546_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:26 2005
(698 letters)
>mm_chr10_40095628_40096725
Length = 1098
Score = 1272 bits (658), Expect = 0.0
Identities = 685/694 (98%)
Strand = Plus / Minus
Query: 5 gaattcagccctgaaaggaaatgcctgtaaactgctgttacagatggttgtgagcctccg 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 757 gaattcagccctgaaaggaaatgcctgtaaattgctgttacagatggttgtgagcctccg 698
Query: 65 cgtgggtgctgggaatagaatatagtcttatagaagcgcagccagagctttactcactga 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 697 cgtgggtgctgggaatagaatatagtcttatagaagtgcagccagagctttactcactga 638
Query: 125 gccataactgcaccccacatccttttagttaggtgggagttttggcagttttcctacttg 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gccataactgcaccccatatccttttagttaggtgggagttttggcagttttcctacttg 578
Query: 185 atgttagatactattatagtctctttcctaatgcagtaagaaaaggctcttgctctttat 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 577 atgttagatactattatagtctctttcctaatgcagtaagaaagggctcttgctctttat 518
Query: 245 atccacaatctctgaaatatacttacaagagaaaagttaattggcttagaagattttatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atccacaatctctgaaatatacttacaagagaaaagttaattggcttagaagattttatt 458
Query: 305 tgaaacttgaatcagcattgcatgtaaatcgtgaggtcaaaccaaaatgtcagctctctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 457 tgaaacttgaatcagcattgcatgtaaatcgtgaggtcaaaccaaaatgtcagctctatt 398
Query: 365 cttctgagaatgacgctccattctagtacaacagttcttattattgtctgctgggttttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cttctgagaatgacgctccattctagtacaacagttcttattattgtctgctgggttttg 338
Query: 425 ttgctgttgtttgagacagtgtgtccatacagatcaagctagcctccactcacaaagatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgctgttgtttgagacagtgtgtccatacagatcaagctagcctccactcacaaagatc 278
Query: 485 agtccacttctgtctccccaagtgctcagaaaaaaaaggtgtgaggcactccccgaaccc 544
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 277 agtccacttctgcctccccaagtgctcagaaaaaaaaggtgtgaggcactccctgaaccc 218
Query: 545 tgcattacaatacttaaagaaaacaaactataaacaactatctcatttctgcatcataaa 604
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 217 tgcattacaatacttaaagaaaacaagctataaacaactatctcatttctgcatcataaa 158
Query: 605 atgtgctgtgtggactgagaaatgcatcttacataaactattgacaattttctttcaaaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atgtgctgtgtggactgagaaatgcatcttacataaactattgacaattttctttcaaaa 98
Query: 665 gttcccacaaaggttgtcctgaatttgtctactt 698
|||||||||||||||| |||||||||||||||||
Sbjct: 97 gttcccacaaaggttgacctgaatttgtctactt 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_p10.g1 MSMg01no546_p10.g1 CHROMAT_FILE:
MSMg01no546_p10.g1 PHD_FILE: MSMg01no546_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:27 2005
(655 letters)
>mm_chr10_39971666_39972719
Length = 1054
Score = 1170 bits (605), Expect = 0.0
Identities = 642/655 (98%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 1 agtacagtgaagaccatttaagacaggcatggttgtgcagtgaagcactcagagggttga 60
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 203 agtacagtgaagaccatttaagacaggaatggttgtgcaatgaagcactcagag--ttga 260
Query: 61 gacaggaggatcacaagtctgaagtcagccagggagagggcatgcacagctcctttgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaggaggatcacaagtctgaagtcagccagggagagggcatgcacagctcctttgcta 320
Query: 121 tgtttgatccccaacatcaccaagaggaaatgaatgtgagccctgaagccaggctaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgatccccaacatcaccaagaggaaatgaatgtgagccctgaagccaggctaaacc 380
Query: 181 caagcactgactgtgccactcactcccttgtgaatctcaaagtgttattggcccccgggc 240
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 caagcactgaccgtgccactcactcccctgtgaatctcaaagtgttattggcccccgggg 440
Query: 241 ttcagtttttccaagtatgaatgaacatgaaaatggtacctatcctggccttgggaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagtttttccaagtatgaatgaacatgaaaatggtacctatcctggccttgggaggct 500
Query: 301 atgactgtactagaactgcacatttatgtgcagcctgggatacatggtcaatgctagccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 atgactgtactagaactgcacatttatgtgcagcctgggatacatggtcaatgctagttc 560
Query: 361 acaccgtgctgaggctgcttccaaaaacaaaaagtatcttgctcagtgaactgtggtagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaccgtgctgaggctgcttccaaaaacaaaaagtatcttgctcagtgaactgtggtagg 620
Query: 421 gactgaattcatatgtctaggcaagaacctaccacaaagctaaaccccagcctcaagtct 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 gactgaattcatatgtctaggcaagaatctaccacaaagctaaaccccagcctcaagtct 680
Query: 481 gaaaaaaaaatatgtcacataaaattaggtataagaaggtaaaacatcaaatccaataca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaaaaaaaatatgtcacataaaattaggtataagaaggtaaaacatcaaatccaataca 740
Query: 541 gtggttacttgtgaagacagaggaacgggagtaagcttggaactgagcacgcagggcttc 600
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtggttacttgtgaagacagaa-aacgggagtaagcttggaactgagcacgcagggcttc 799
Query: 601 gctgctatggtgaggatctctctgaggtatgggagcttgaactcagattccccat 655
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 800 gctgctatggtgaggatctctctgagatatgggagcttgaactcagattccccat 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1054
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1044
Effective search space: 673380
Effective search space used: 673380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
