Query= MSMg01no547_h17.b1 MSMg01no547_h17.b1 CHROMAT_FILE:
MSMg01no547_h17.b1 PHD_FILE: MSMg01no547_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:08 2005
(316 letters)
>mm_chr10_89684744_89685459
Length = 716
Score = 559 bits (289), Expect = e-164
Identities = 305/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttacagatcttcatgaatatcacaaggaagctcaatggacacagcactataa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttacagaacttcatgaatatcacaaggaagctcaatggacacagcactataa 264
Query: 65 aatccaacggtgagagtctttgcatcctctttaggtaaatttattcttatctaatctctg 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatccaacggttagagtctttgcatcctctttaggtaaatttattcttatctaatctctg 324
Query: 125 ttgctaaactcagtctctttattgtgcatacaaaactcttccttcaacactcaattggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgctaaactcagtctctttattgtgcatacaaaactcttccttcaacactcaattggtc 384
Query: 185 accatttggcaatcatttaatgtagcattacatgcaggtgcatacttgcacaatatatgt 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 accatttggcaatcatttaatgtagcattacatgcaggtgcatacttgtacaatatatgt 444
Query: 245 gtgtgtgtgtattatgtatgtatatatgtatgtgtgtatgtatgaattatgtgtgtaagt 304
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 gtgtgtgt--attatgtatgtatatatgtatgtgtgtatgtatgaattatgcgtgtaagt 502
Query: 305 gtgtatgtatg 315
|||||||||||
Sbjct: 503 gtgtatgtatg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_h17.g1 MSMg01no547_h17.g1 CHROMAT_FILE:
MSMg01no547_h17.g1 PHD_FILE: MSMg01no547_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:08 2005
(666 letters)
>mm_chr10_89896978_89898041
Length = 1064
Score = 866 bits (448), Expect = 0.0
Identities = 475/490 (96%), Gaps = 12/490 (2%)
Strand = Plus / Minus
Query: 1 aataaaagttcactatatgtgccccccacccccacattcacagaaggttctctgaggatt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aataaaagttcactatatgtg-cccccacccccacattcacagaaggttctctgaggatt 425
Query: 61 catttgaacaatgatcattcatattctccattctaaggaataaatcacctgaaacagtga 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 424 catttgaacaatgatcattcgtattctccattctaaggaataaatcacctgaaacagtga 365
Query: 121 gtagggattaataggctgcccagtgcttacatggggtaaagaatactgctgttcctaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtagggattaataggctgcccagtgcttacatggggtaaagaatactgctgttcctaatc 305
Query: 181 agggagtgtacacagaaggacctcacctcattagcaggggggggggg-----attctgct 235
|||||| | ||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 304 agggagcgcacacagaaggacctcacctcattagca------gggggtaaaaattctgct 251
Query: 236 ctgatgttaccattgctgtcctctggcctaacatgatttaaaaactaccatgttcccaag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctgatgttaccattgctgtcctctggcctaacatgatttaaaaactaccatgttcccaag 191
Query: 296 taactcaactgcgctcaagaaaaacctctcaagactattttataggttacacaggttcaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 taactcaactgcgctcaagaaaaacctctcaagactattttataggttacacaggttcaa 131
Query: 356 ataaggtgaaaacatacaatgtctgacatctgatccgaaactaccaggcatgaaaacaag 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ataaggtgaaaacatacaatgtctgacatctgatccgaaactaccaggcatgaaaacaag 71
Query: 416 ctgggtacgtgagacaggacacaggataagaaaataagacaaactgctcagaacttacag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ctgggtacgtgagacaggacacaggataagaaaataagacaaactgctcagaacttacag 11
Query: 476 ataatagggg 485
||||||||||
Sbjct: 10 ataatagggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1064
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1054
Effective search space: 691424
Effective search space used: 691424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
