Query= MSMg01no547_i01.b1 MSMg01no547_i01.b1 CHROMAT_FILE:
MSMg01no547_i01.b1 PHD_FILE: MSMg01no547_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:09 2005
(537 letters)
>mm_chr10_111013600_111014536
Length = 937
Score = 1015 bits (525), Expect = 0.0
Identities = 534/537 (99%)
Strand = Plus / Plus
Query: 1 gctatctcttctccaagtcccacccccctaaggaagaaagctattcccactagaccctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctatctcttctccaagtcccacccccctaaggaagaaagctattcccactagaccctcc 260
Query: 61 ctgagcttccattaacacaaatcactggaagagaggccgtctgtcaacacacctgcatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagcttccattaacacaaatcactggaagagaggccgtctgtcaacacacctgcatag 320
Query: 121 actctgacacacacagtcctcttctatttttagtcttgctcaatatgccaaagagattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctgacacacacagtcctcttctatttttagtcttgctcaatatgccaaagagattta 380
Query: 181 tacttccctgctagtaggcaggcccagtctcatttcaacacgtccctacaaaccccctaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tacttccctgctagtaggcaggcccagtctcatttcaacacgttcctacaaaccccctaa 440
Query: 241 cgtcccccaaaatcatttactgttcattgaaaaagtgtccacagtttctgttcttcccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgtcccccaaaatcatttactgttcattgaaaaagtgtccacagtttctgttcttcccca 500
Query: 301 atagaacagaggtatcattttggagtttctacgtcctattgggccaggggttaattgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagaacagaggtatcattttggagtttctacgtcctattgggccaggggttaattgtat 560
Query: 361 tacatgtgtgtcttctctccagctaattggtctttgccagtgtattccagccaatccttg 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacatgtgtgtcttctctctagctaattggtctttgccagtgtattccagccaatccttg 620
Query: 421 aatggcagaggggaaattcccttcactattccatatgtaaatgggaatctcagagctcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatggcagaggggaaattcccttcactattccatatgtaaatgggaatctcagagctcta 680
Query: 481 ggatggtgacaaaaaaaattaggcaatgtaaagggtgtgaggtattcgccagagaag 537
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggatggtgacaagaaaaattaggcaatgtaaagggtgtgaggtattcgccagagaag 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_i01.g1 MSMg01no547_i01.g1 CHROMAT_FILE:
MSMg01no547_i01.g1 PHD_FILE: MSMg01no547_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:09 2005
(639 letters)
>mm_chr10_111203508_111204544
Length = 1037
Score = 1127 bits (583), Expect = 0.0
Identities = 625/639 (97%), Gaps = 2/639 (0%)
Strand = Plus / Minus
Query: 1 cacagaaagaaatgcttccatgactggctgagtcattctggagagatgtttccagtaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 cacagaaagaaatgcttccatgactggctgagtcattctggagagatgtttccagtaagc 778
Query: 61 cacattatgctggatgctgttcaagagagaaaatgccaagcccaccgagcttcagtgggc 120
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 777 cacattatgctggatgctgttcaagagagaaaaacccaagcccactgagcttcagtgggc 718
Query: 121 tgtgtgggtgggtttactcgagtacaaacatcaaatacagccattggaacctgtatcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 717 tgtgtgggtgggtttactcgagtacaaacatcaaatacagccattggaacccgtatcctg 658
Query: 181 ggaaacaagagaatggctcccgatcccaactgggattttacaagttctattttagccaaa 240
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggaaacaagagaacggctccccatcccaactgggattttacaagttctattttagccaaa 598
Query: 241 taataaaaagtgaataaaaaaaaatgggtgtaaattaaaaatgccctggtgacatttatt 300
||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 597 taataaaaagtgaat-aaaaaaaatgggtgtaaattaaaaatgccccagtgacattcatt 539
Query: 301 gtattattttcccccctcagactcctgaaattgaaattggatgttataaaattcaagctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gtattattttcccccctcagactcctgaaattgaaattggatgttataaaattcaagctt 479
Query: 361 tttttttgcaaaactttgatgtctctggtagactttcacatttctatttaaaaactgctg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttttttgcaaaactttgatgtctctggtagactttcacatttctatttaaaaactgctg 419
Query: 421 atgaacaccccacctgcagcatgccccccttcctttgtcagataaatagtcaccctggaa 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgaacaccccacctacagcatgccccccttcctttgtcagataaatagtcaccctggaa 359
Query: 481 aggctgtgattatgagattaaaaaaatcatttgcattttataacttttctgtcaattttt 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aggctgtgattatgagatt-aaaaaatcatttgcattttataacttttctgtcaattttt 300
Query: 541 ccttacaagagtaaaactataaacaatttgaatactaaatttcactctaacatcaagacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 299 ccttacaagagtaaaactataaacaatttgaatactaaatttcactctaacgtcaagacc 240
Query: 601 atacacaatcaatcagctgaaaattggacactaaaattt 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atacacaatcaatcagctgaaaattggacactaaaattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1037
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1027
Effective search space: 645983
Effective search space used: 645983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
