Query= MSMg01no547_n09.b1 MSMg01no547_n09.b1 CHROMAT_FILE:
MSMg01no547_n09.b1 PHD_FILE: MSMg01no547_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:34 2005
(653 letters)
>mm_chr10_127740446_127741498
Length = 1053
Score = 1247 bits (645), Expect = 0.0
Identities = 648/649 (99%)
Strand = Plus / Plus
Query: 5 gaattctgggtagctatccgtttccattacttcccccttacccccgccccgtttgtgggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgggtagctatccgtttccattacttcccccttacccccgccccgtttgtgggt 264
Query: 65 aactggccgttcttgttacccaccccctggagaatgctgggtaaccactgtaaaggattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aactggccgttcttgttacccaccccctggagaatgctgggtaaccactgtaaaggattc 324
Query: 125 tgggaaactggcttgtcttgcccccttcaccgcccagcccctttgtctcatgtccaattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgggaaactggcttgtcttgcccccttcaccgcccagcccctttgtctcatgtccaattc 384
Query: 185 taagaaacaagcatttcagagctctcccccgaactccagcccctatcaaacccgctccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagaaacaagcatttcagagctctcccccgaactccagcccctatcaaacccgctccct 444
Query: 245 tcaccttgtggttcaggagaaagggaagtcaagagttagatcatttggtgggctggcagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcaccttgtggttcaggagaaagggaagtcaagagttagatcatttggtgggctggcagg 504
Query: 305 gaacttaggaagtttagaggtgcagagtaagggacactgtcatgccactcacagtacagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaacttaggaagtttagaggtgcagagtaagggacactgtcatgccactcacagtacagc 564
Query: 365 gttgcccttgtcctcttcatgcatgcttccgtctttgcctggcagtctcatcccctctgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttgcccttgtcctcttcatgcatgcttccgtctttgcctggcagtctcatcccctctgc 624
Query: 425 ctacctgattgtcctgtccacatagaagatacttccagtacctaggcctatccctgactg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctacctgattgtcctgtccacatagaagatacttccagtacctaggcctatccctgactg 684
Query: 485 cgctgcctctttcccttgcaggccagaatgtccattctaggttcactggtgctgtcctcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cgctgcctctttcccttgcaggccagaatgtccattctaggttcactggtgctgtcctcc 744
Query: 545 tgaaggctgggtcacttatctgtaggaagcgtggcaagggagggtgtgactccggtctga 604
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgaaggctgggtcacttgtctgtaggaagcgtggcaagggagggtgtgactccggtctga 804
Query: 605 ccagcggccactatcgtcatgaactttgagggtctggatcctggactgg 653
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ccagcggccactatcgtcatgaactttgagggtctggatcctggactgg 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_n09.g1 MSMg01no547_n09.g1 CHROMAT_FILE:
MSMg01no547_n09.g1 PHD_FILE: MSMg01no547_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:34 2005
(660 letters)
>mm_chr10_127890314_127891373
Length = 1060
Score = 567 bits (293), Expect = e-165
Identities = 313/325 (96%), Gaps = 9/325 (2%)
Strand = Plus / Minus
Query: 345 gtcctgtagccctggctgtcctggaactaacttgctctgtaggccacgctggcctctgtc 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 gtcctgtagccctggctgtcctggaactaacttgctctgtaggccacgctggcctctgtc 1001
Query: 405 tcctgggtgctggcattaaagatgagtactaccatacccagcctgttacgatttacaggg 464
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1000 tcctgggtgctggcattaaagatgagcactaccatacccagcctgttatgatttacaggg 941
Query: 465 tcttactatatagtcaggctggcctggaacttgctgagtattctaagatggactccaact 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 tcttactatatagtcaggctggcctggaacttgctgagtattctaagatggactccaact 881
Query: 525 cctgtcccatc---------ttggtactggggtactgaacctgggactctggcttgcaag 575
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 cctgtcccatcttggtactgttggtactggggtactgaacctgggactctggcttgcaag 821
Query: 576 tccactgacctccacctttagcctggacttgagttctcggtcttcttgcttcagccttct 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tccactgacctccacctttagcctggacttgagttctcggtcttcttgcttcagccttct 761
Query: 636 agtatgtgggcgtacagaggaggga 660
|||| ||||||||||||||||||||
Sbjct: 760 agtacgtgggcgtacagaggaggga 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
