ACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGCCTGGATTGTTTCTCTGCTGCTGTGAGAGCCGCAGTTAAGGG
TGAATGTCATCAGTGCTCACCAAGCGATGTGTGTTAAGCAGCTCGGAAAC
GAATGGGTAAATATATTATTCTAAATAAGGCTGCACCATTCCTTGGGGGG
AAATACAGAACACCCTGCTAGCGTCTGCAATGTAATTATAATATTTTATG
TCCAAAAATACAACTGGCATTTGAGTGCGGGGCAATAGGTCTTCTCCCTT
TGAGGCTGTGAGGAGCTTAAAGCTAAATTCCCTCTGCTCATGCCCAGGAG
ACAAGTGTTGATTTTTTTTTTAATTTTTATTTACTTTTTGTCATCAAAGT
ACACTAATAAGCTAGGTCTCTCTACTGGAATCCATAAAAGAAATTTGTCT
CACCATTTCTACAGTGTGTGGTATTTAAATGCTAGTTTTGATGGTTTTGT
TTTGTTTTAATCTGGCACCCAGTGCTACCACTATGATAAGAGATTGTCTG
TCTGTGCTGGTCTTTAACTTCACTCTGTCTCTGTCCAACAACCTCTGAGT
GGTATGGATTTTGTTTTCTTTCCCACCTCAGAAATGCATATGTCCCTTGA
GAAGTAAATTAAATAAATAAATAAGTAAGTAAATAAATAAATAATCTCAT
TAGAAAATAAGAGCTGAATCTATTATTGCTGCTCA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTACAGAATGAAATAAAGTTTTTACT
GGAATAAGATGGCCCATTGTCTGTCTTAATAAGTTTAGGCAATCCCATGG
CATTAAATGCTTGTAGGCAATGATCAATTACGTTTTTTGAAGCTTCTCCT
GTATGCAGAGAAGCAAAAAGAAATCCTGAACAAGTATCAATGTAAACATG
TATATATTTTAGTTTTTTAAATTCTGTATAATGGGTTATATCCATTTGCC
AAATATGATTAGGCATAAGGCCTCTAGGATTAACTCCTAGATGTGGCACT
GGAGATAAAGTAATACATTTAGGACATTGTTTTACGATCATTCTCGCTTG
CTCCTTTGTGATCTTATGTCGGAGTCTTAGGGTATGGCTAGAAAGATGAA
ACCTTTCGTGATCACGTTGGGCCAAAGCAACCCGATTTGAAACTAAGGCT
TTTCTTATTAGAGCTCTGTCAATGTGATCATTACCCTCTGTCAGAGGTCT
AGGAAGACCAGAGTGAGACCGTATGTGGCCAATATAAAACGGATTTTTCT
GGGCGAGAATGATGTTTTGTAATTTTGAAAATAAAGATCCTGACGGCGTA
TTGAAGTTAAACGTACCACAGGTTTTTAATAAGGGTATTGACTGAGTAAC
ATAAACTGTCAGTAAAATATTAAAAGCCTCATGTACN

Query= MSMg01no548_j21.b1 MSMg01no548_j21.b1 CHROMAT_FILE:
MSMg01no548_j21.b1 PHD_FILE: MSMg01no548_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:34 2005
         (638 letters)



>mm_chr10_40918235_40919272
          Length = 1038

 Score =  957 bits (495), Expect = 0.0
 Identities = 510/515 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgcctggattgtttctctgctgctgtgagagccgcagttaagggtgaatgtca 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattcctgcctggagtgtttctctgctgctgtgagagccgcagttaagggtgaatgtca 456

                                                                       
Query: 65  tcagtgctcaccaagcgatgtgtgttaagcagctcggaaacgaatgggtaaatatattat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcagtgctcaccaagcgatgtgtgttaagcagctcggaaacgaatgggtaaatatattat 396

                                                                       
Query: 125 tctaaataaggctgcaccattccttggggggaaatacagaacaccctgctagcgtctgca 184
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 395 tctaaataaggctgcaccattccttgggggaaaatacagaacaccctgctagcgtctgca 336

                                                                       
Query: 185 atgtaattataatattttatgtccaaaaatacaactggcatttgagtgcggggcaatagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgtaattataatattttatgtccaaaaatacaactggcatttgagtgcggggcaatagg 276

                                                                       
Query: 245 tcttctccctttgaggctgtgaggagcttaaagctaaattccctctgctcatgcccagga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcttctccctttgaggctgtgaggagcttaaagctaaattccctctgctcatgcccagga 216

                                                                       
Query: 305 gacaagtgttgattttttttttaatttttatttactttttgtcatcaaagtacactaata 364
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 215 gacaagtgttgattttttttttaatttttatttactttttgtcaccaaagtacactaata 156

                                                                       
Query: 365 agctaggtctctctactggaatccataaaagaaatttgtctcaccatttctacagtgtgt 424
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 agctaggtcactctactggaatccataaaagaaatttgtctcaccatttctacagtgtgt 96

                                                                       
Query: 425 ggtatttaaatgctagttttgatggttttgttttgttttaatctggcacccagtgctacc 484
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ggtatttaaatgctagttttggtggttttgttttgttttaatctggcacccagtgctacc 36

                                              
Query: 485 actatgataagagattgtctgtctgtgctggtctt 519
           |||||||||||||||||||||||||||||||||||
Sbjct: 35  actatgataagagattgtctgtctgtgctggtctt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)