BAC Information

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BAC

Clone NameB6Ng01-001D18
Chromosome11 (Build37)
Map Location 17,085,999 - 17,087,089
singlet/doubletsinglet
Overlap genePpp3r1
Upstream geneLOC665660, Vstm2, Sec61g, Akt2-ps, LOC665689, LOC627583, Egfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644
Downstream genePno1, AI553587, C1d, LOC382486, EG665748, Etaa1, LOC327871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001D18.bB6Ng01-001D18.g
ACCDH839614DH839615
length5511,094
definitionDH839614|Mus musculus domesticus DNA, BAC clone: B6Ng01-001D18, 5' end.DH839615|Mus musculus domesticus DNA, BAC clone: B6Ng01-001D18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttctcttcccagatgtcccacctcctatttcctgcctaagccataggcc
atcagatttattattgacatgtaccacatctgtacagacataagatattc
tctttacaaaacacttaggttcttggcttcccaagcagtgtgggaataaa
tacagagacttgttatgggttactctggtgctgtttgtattctaatgtta
actcagcttcctcaagaaggggtgacctaacaaggagtagatcacatact
caggtgatttcacgcgacccttctccctattttaactagtcaagttaaga
ttagagcttgtgtttgggcaggggaagggaaaggtgggagtggaagtttt
agagagaggaagaagaggtggaaggaagatggaacagaaccacataaccc
agagaagttgcaagtagcaagaaatctcaaagccgggtaatagagtagtg
tagcagtaaatctacccaatctagatgtgaagcttataagtatcataact
gaattgagtgcttctgtgtgggcttattggggtttgagatttactgttac
a
gaattcctccccaccaaactcatccagatatcattagtgactagagcaga
gacaatacgccagacttggagcatttgtagattttgtagacagagacaag
tcttgttggttttctatttgtttacttatttcatgtgtgggtgtgtctgc
acaccccagccagtgtctctgtctacccacatgtcagagggtcgggtcag
gcaatcattgttccccttccttgtgtgtcccagggagagaactcaggctt
ttgtctttacctgccaagccatctttatttcacagtcagaaggattccaa
aaggacttagtgactttatattttattggcaaaatacaggttttgtgttt
ttctaaattttctaggcctgacttaactgttagatatcatgaagattcat
ttaatcaagaaagtgctttaaaaaaaaaaaagatgcggtttcttaggttg
taaatttcttatttgaaatagttttctgtatgtcttatttttgaacatgc
agccttttctttgctatgtatgcctttattgtatttagtaaattccagga
tccagtacccccagaaatatctcttggtgtagcactgggacacttttgat
aaatttaccaggagctgttgcccttggagacatggttgttttggtctgct
tgggataaaaagccagccaggctttgggtattcctcacaagacggggtga
cagtttatggggaagtctgagcatgcctgaggcttccccgctggaatttt
gagtccctctgctttctcctatgagaggttatgtaggcgaggggttgatg
tgcagtcaggtttacaagagcattcacagctcttaagcacgggtagtgcg
tgcttcagctgggacagactgactgctgcatctcagcatccgttgtagct
taacatttctaatatcagcacagtatgtattgacttgggaagatctattg
ataattttttttttttaacatagcaaatttttttcgaggcatggtggttt
gggatctaaagtagaaatatttccctcaaagagaagtctttcttagaaga
ctttaatgtgcctgaataaaatttcttacaagtcccttacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17085999_17087089
seq2: B6Ng01-001D18.g_69_1162

seq1  GAATTCCTCCCCACCAAACTCATCCAGATATCATTAGTGACTAGAGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCACCAAACTCATCCAGATATCATTAGTGACTAGAGCAGA  50

seq1  GACAATACGCCAGACTTGGAGCATTTGTAGATTTTGTAGACAGAGACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATACGCCAGACTTGGAGCATTTGTAGATTTTGTAGACAGAGACAAG  100

seq1  TCTTGTTGGTTTTCTATTTGTTTACTTATTTCATGTGTGGGTGTGTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTGGTTTTCTATTTGTTTACTTATTTCATGTGTGGGTGTGTCTGC  150

seq1  ACACCCCAGCCAGTGTCTCTGTCTACCCACATGTCAGAGGGTCGGGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCAGCCAGTGTCTCTGTCTACCCACATGTCAGAGGGTCGGGTCAG  200

seq1  GCAATCATTGTTCCCCTTCCTTGTGTGTCCCAGGGAGAGAACTCAGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCATTGTTCCCCTTCCTTGTGTGTCCCAGGGAGAGAACTCAGGCTT  250

seq1  TTGTCTTTACCTGCCAAGCCATCTTTATTTCACAGTCAGAAGGATTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTACCTGCCAAGCCATCTTTATTTCACAGTCAGAAGGATTCCAA  300

seq1  AAGGACTTAGTGACTTTATATTTTATTGGCAAAATACAGGTTTTGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTTAGTGACTTTATATTTTATTGGCAAAATACAGGTTTTGTGTTT  350

seq1  TTCTAAATTTTCTAGGCCTGACTTAACTGTTAGATATCATGAAGATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTTTCTAGGCCTGACTTAACTGTTAGATATCATGAAGATTCAT  400

seq1  TTAATCAAGAAAGTGCTTTAAAAAAAAAAAAGATGCGGTTTCTTAGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAAGAAAGTGCTTTAAAAAAAAAAAAGATGCGGTTTCTTAGGTTG  450

seq1  TAAATTTCTTATTTGAAATAGTTTTCTGTATGTCTTATTTTTGAACATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCTTATTTGAAATAGTTTTCTGTATGTCTTATTTTTGAACATGC  500

seq1  AGCCTTTTCTTTGCTATGTATGCCTTTATTGTATTTAGTAAATTCCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTCTTTGCTATGTATGCCTTTATTGTATTTAGTAAATTCCAGGA  550

seq1  TCCAGTACCCCCAGAAATATCTCTTGGTGTAGCACTGGGACACTTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTACCCCCAGAAATATCTCTTGGTGTAGCACTGGGACACTTTTGAT  600

seq1  AAATTTACCAGGAGCTGTTGCCCTTGGAGACATGGTTGTTTTGGTCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACCAGGAGCTGTTGCCCTTGGAGACATGGTTGTTTTGGTCTGCT  650

seq1  TGGGATAAAAAGCCAGCCAGGCTTTGGGTATTCCTCACAAGACGGGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAAAAAGCCAGCCAGGCTTTGGGTATTCCTCACAAGACGGGGTGA  700

seq1  CAG-TTATGGGGAAGTCTGAGCATGCCTGAGGCTTCCCCGCTGGAATTTT  749
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATGGGGAAGTCTGAGCATGCCTGAGGCTTCCCCGCTGGAATTTT  750

seq1  GAGTCCCTCTGCTTTCTCCTATGAGAGGTTATGTAGGCGAGGGGTTGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCTCTGCTTTCTCCTATGAGAGGTTATGTAGGCGAGGGGTTGATG  800

seq1  TGCAGTCAGGTTTACAAGAGCATTCACAGCTCTTAAGCACGGGTAGTGCG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCAGGTTTACAAGAGCATTCACAGCTCTTAAGCACGGGTAGTGCG  850

seq1  TGCTTCAGCTGGGACAGACTGACTGCTGCATCTCAGCATCCGTTGTAGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGCTGGGACAGACTGACTGCTGCATCTCAGCATCCGTTGTAGCT  900

seq1  TAACATTTCTAATATCAGCACAGTATGTATTGACTTGGGAAGATCTATTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTCTAATATCAGCACAGTATGTATTGACTTGGGAAGATCTATTG  950

seq1  ATAATTTTTTTTTTTTAACATAGCAAATTTTTTTTCGAAGCCATGGTGGT  999
      ||||||||||||||||||||||||||| ||||||||| || |||||||||
seq2  ATAATTTTTTTTTTTTAACATAGCAAA-TTTTTTTCG-AGGCATGGTGGT  998

seq1  TTGGGATCTAAAGTAGAAATA-TTCCCTCAAAGAG-AGTTCTTCTTAGAA  1047
      ||||||||||||||||||||| ||||||||||||| |||  |||||||||
seq2  TTGGGATCTAAAGTAGAAATATTTCCCTCAAAGAGAAGTCTTTCTTAGAA  1048

seq1  GACTT--ATGTGCCTGATTAAAATTCCTTACAAGTTCCATACAGTG  1091
      |||||  |||||||||| ||||||| ||||||||| || |||||||
seq2  GACTTTAATGTGCCTGAATAAAATTTCTTACAAGTCCCTTACAGTG  1094