BAC Information

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BAC

Clone NameB6Ng01-001I16
Chromosome11 (Build37)
Map Location 84,604,342 - 84,763,133
singlet/doubletdoublet
Overlap geneMrm1, BC022224, Ggnbp2, Pigw, Znhit3
Upstream geneLOC676191, Tcf2, Ddx52, Ap1gbp1, Dusp14, Tada2l, OTTMUSG00000000997, Acaca, LOC100043671, Aatf, Lhx1
Downstream geneCar4, Usp32, LOC668794, LOC234848, 1700125H20Rik, Appbp2, D630032N06Rik, Ppm1d, Bcas3, Tbx2, Tbx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001I16.bB6Ng01-001I16.g
ACCDH839833DH839834
length4731,021
definitionDH839833|Mus musculus domesticus DNA, BAC clone: B6Ng01-001I16, 5' end.DH839834|Mus musculus domesticus DNA, BAC clone: B6Ng01-001I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,604,342 - 84,604,820)(84,762,115 - 84,763,133)
sequence
ttataataaaggtttaaaaataaaacataaaatggactggagatgtaact
ggtagaatgtttgcttaccatgagtggagcccttggtttggttcacagca
ctgcataaactgggcacagtggcacatggaggcaggtcaatcagagttca
aactgtctgctacacagtgagtttagaacctgggggtggggggcgaggga
gggagacagaaacagaaacagacagacagatggacagacagacagacggg
gaatatgaatttatcctcctccttgctatttagcctctgttctcaggaag
caacctggaaatctggctagtgagcctcctctccttcagtttccttgccc
cacccccaagatggaaaaccttcggttctcctgggaaagagacacatcta
gagatctaatataaacatgagcgatacatgagcgatgctgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgt
gaattctcactgaaccgcagctcaccgctttgggcccagcactgaggcta
tagagactcaccatcatgtgggtggtggggatctcaacttaagtcctcac
actagagcgaacggcaggcacctcactgacagagccatagcccaagtcct
taaattaatagccattatggctaataatggccagagtattccaggaaccc
agagaagtgccacctaaagaggccagtgggtaggaggctaggggagtgtc
ctgaacttgagacctgactgagtctttaaagctgatgtctcacattcacc
tacctatctggcatcctagtgcacacctgcaatcccagccctcacggaag
gctggggcaccacagccagaccctctctaggaaagagaaaaaaaagaaca
aagacctgatctttcctgtggtgtatcggctaagccagcacacaccccag
agaagctcacctaacgccagaaggcagcaaagatcctaagttactttttt
ggcttataaacgaggaagctgaggctcagagaggcggatgtcttgtctca
attgtccaataaggaaagagcagaggtggatctgcaccctggtctctgtc
ccctcttcccaggcctctgcatcctgtctccctgacaccccccccccctc
cagaacatcatacttccttcccactgggacctcatttccacctgggcttg
ttttttgttttttgtttgtttggttggttggggttgttttgttttgtttt
gtttttggggttttttttttgcacccccttatagtaatttagcaggggac
tcagggaagggtggcagagattcctaacgtttgtattcctgggatgttga
gatgaaatccacaggctccagcaaggtttaatcatagcctggtcttcacc
actccccagccatggaactccgccacgttccagcagagctagagtgctgc
tcttttgccagttcttgtgcaggcaagttgcagcccttccaccaccctta
ttttcctgactgggaaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_84604342_84604820
seq2: B6Ng01-001I16.b_43_521

seq1  GAATTCTTATAATAAAGGTTTAAAAATAAAACATAAAATGGACTGGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATAATAAAGGTTTAAAAATAAAACATAAAATGGACTGGAGAT  50

seq1  GTAACTGGTAGAATGTTTGCTTACCATGAGTGGAGCCCTTGGTTTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGGTAGAATGTTTGCTTACCATGAGTGGAGCCCTTGGTTTGGTTC  100

seq1  ACAGCACTGCATAAACTGGGCACAGTGGCACATGGAGGCAGGTCAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTGCATAAACTGGGCACAGTGGCACATGGAGGCAGGTCAATCAG  150

seq1  AGTTCAAACTGTCTGCTACACAGTGAGTTTAGAACCTGGGGGTGGGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAACTGTCTGCTACACAGTGAGTTTAGAACCTGGGGGTGGGGGGC  200

seq1  GAGGGAGGGAGACAGAAACAGAAACAGACAGACAGATGGACAGACAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGAGACAGAAACAGAAACAGACAGACAGATGGACAGACAGACA  250

seq1  GACGGGGAATATGAATTTATCCTCCTCCTTGCTATTTAGCCTCTGTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGGAATATGAATTTATCCTCCTCCTTGCTATTTAGCCTCTGTTCTC  300

seq1  AGGAAGCAACCTGGAAATCTGGCTAGTGAGCCTCCTCTCCTTCAGTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAACCTGGAAATCTGGCTAGTGAGCCTCCTCTCCTTCAGTTTCC  350

seq1  TTGCCCCACCCCCAAGATGGAAAACCTTCGGTTCTCCTGGGAAAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCACCCCCAAGATGGAAAACCTTCGGTTCTCCTGGGAAAGAGACA  400

seq1  CATCTAGAGATCTAATATAAACATGAGCGATACATGAGCGATGCTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGAGATCTAATATAAACATGAGCGATACATGAGCGATGCTGTGTG  450

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGT  479
      |||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGT  479

seq1: chr11_84762115_84763133
seq2: B6Ng01-001I16.g_64_1084 (reverse)

seq1  TTCTCTTCCACAGTCAGGAAAATAGGGTGGGTGGGAAGGGCTGCCACCTG  50
      |||| |||| |||||||||||||| ||  ||| ||||||||||| || ||
seq2  TTCTTTTCC-CAGTCAGGAAAATAAGGGTGGT-GGAAGGGCTGCAACTTG  48

seq1  CCCTGCAC-AGAGCTGGCAAAAGAGCAGCACTCTAGGCTCTGCTGGAACG  99
       ||||||| ||| |||||||||||||||||||||| ||||||||||||||
seq2  -CCTGCACAAGAACTGGCAAAAGAGCAGCACTCTA-GCTCTGCTGGAACG  96

seq1  TGGCGGAGTTCCA-GGTTGGGGAGTGGTGAAG-CCAGGCTATTGATTAAA  147
      ||||||||||||| || ||||||||||||||| |||||||| ||||||||
seq2  TGGCGGAGTTCCATGGCTGGGGAGTGGTGAAGACCAGGCTA-TGATTAAA  145

seq1  CCTTGCTGG-GCCTGTGGATTTCATCTCAACAT-CCAGGAATACAAACGT  195
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  CCTTGCTGGAGCCTGTGGATTTCATCTCAACATCCCAGGAATACAAACGT  195

seq1  TA-GAATCTCTGCCACCCTTCCCTGAGTCCCCTGCTAATTAACTCTAAGG  244
      || ||||||||||||||||||||||||||||||||||| | ||| |||||
seq2  TAGGAATCTCTGCCACCCTTCCCTGAGTCCCCTGCTAAATTACTATAAGG  245

seq1  GGGTGC-AAAAAAAAACCCCAAAAACAAAACAAAACAAAACAACCCCAAC  293
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCAAAAAAAAAACCCCAAAAACAAAACAAAACAAAACAACCCCAAC  295

seq1  CAACCAAACAAACAAAAAACAAAAAACAAGCCCAGGTGGAAATGAGGTCC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAACAAACAAAAAACAAAAAACAAGCCCAGGTGGAAATGAGGTCC  345

seq1  CAGTGGGAAGGAAGTATGATGTTCTGGAGGGGGGGGGGGTGTCAGGGAGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGAAGGAAGTATGATGTTCTGGAGGGGGGGGGGGTGTCAGGGAGA  395

seq1  CAGGATGCAGAGGCCTGGGAAGAGGGGACAGAGACCAGGGTGCAGATCCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCAGAGGCCTGGGAAGAGGGGACAGAGACCAGGGTGCAGATCCA  445

seq1  CCTCTGCTCTTTCCTTATTGGACAATTGAGACAAGACATCCGCCTCTCTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTCTTTCCTTATTGGACAATTGAGACAAGACATCCGCCTCTCTG  495

seq1  AGCCTCAGCTTCCTCGTTTATAAGCCAAAAAAGTAACTTAGGATCTTTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAGCTTCCTCGTTTATAAGCCAAAAAAGTAACTTAGGATCTTTGC  545

seq1  TGCCTTCTGGCGTTAGGTGAGCTTCTCTGGGGTGTGTGCTGGCTTAGCCG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTGGCGTTAGGTGAGCTTCTCTGGGGTGTGTGCTGGCTTAGCCG  595

seq1  ATACACCACAGGAAAGATCAGGTCTTTGTTCTTTTTTTTCTCTTTCCTAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCACAGGAAAGATCAGGTCTTTGTTCTTTTTTTTCTCTTTCCTAG  645

seq1  AGAGGGTCTGGCTGTGGTGCCCCAGCCTTCCGTGAGGGCTGGGATTGCAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCTGGCTGTGGTGCCCCAGCCTTCCGTGAGGGCTGGGATTGCAG  695

seq1  GTGTGCACTAGGATGCCAGATAGGTAGGTGAATGTGAGACATCAGCTTTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACTAGGATGCCAGATAGGTAGGTGAATGTGAGACATCAGCTTTA  745

seq1  AAGACTCAGTCAGGTCTCAAGTTCAGGACACTCCCCTAGCCTCCTACCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCAGTCAGGTCTCAAGTTCAGGACACTCCCCTAGCCTCCTACCCA  795

seq1  CTGGCCTCTTTAGGTGGCACTTCTCTGGGTTCCTGGAATACTCTGGCCAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTTTAGGTGGCACTTCTCTGGGTTCCTGGAATACTCTGGCCAT  845

seq1  TATTAGCCATAATGGCTATTAATTTAAGGACTTGGGCTATGGCTCTGTCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCATAATGGCTATTAATTTAAGGACTTGGGCTATGGCTCTGTCA  895

seq1  GTGAGGTGCCTGCCGTTCGCTCTAGTGTGAGGACTTAAGTTGAGATCCCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTGCCTGCCGTTCGCTCTAGTGTGAGGACTTAAGTTGAGATCCCC  945

seq1  ACCACCCACATGATGGTGAGTCTCTATAGCCTCAGTGCTGGGCCCAAAGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCACATGATGGTGAGTCTCTATAGCCTCAGTGCTGGGCCCAAAGC  995

seq1  GGTGAGCTGCGGTTCAGTGAGAATTC  1019
      ||||||||||||||||||||||||||
seq2  GGTGAGCTGCGGTTCAGTGAGAATTC  1021