BAC Information

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BAC

Clone NameB6Ng01-005E23
Chromosome11 (Build37)
Map Location 88,026,411 - 88,175,748
singlet/doubletdoublet
Overlap gene1700106J16Rik, LOC668793, Msi2
Upstream geneTrim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23
Downstream geneLOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005E23.bB6Ng01-005E23.g
ACCDH842480DH842481
length126252
definitionDH842480|Mus musculus domesticus DNA, BAC clone: B6Ng01-005E23, 5' end.DH842481|Mus musculus domesticus DNA, BAC clone: B6Ng01-005E23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,175,623 - 88,175,748)(88,026,411 - 88,026,662)
sequence
gaattcaagttatctatcatgggacacagaactcagggaaaaaagtcacc
gagcccataacatcttcaaaaggctatgtcatgctagaatgaaatagaag
cctcatgggggtggggagttgggggg
ttcatgagggaacatggaaggttctctgctggagttctggctactttatg
ggttcctagttctaccatcctccaaccgtatcccttccaacccccaacgc
aaggtaggagagaaagaaggctagaggggaaagggggctgtcgatctctt
tagactacttcctgctgactaggggaagttgggttccttggggcaatatt
gatcttttcaggatatctccaaccagcagcagtggtgggagtggggagga
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_88175623_88175748
seq2: B6Ng01-005E23.b_42_167 (reverse)

seq1  CCCCCCAACTCCCCACCCCCATGAGGCTTCTATTTCATTCTAGCATGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAACTCCCCACCCCCATGAGGCTTCTATTTCATTCTAGCATGACA  50

seq1  TAGCCTTTTGAAGATGTTATGGGCTCGGTGACTTTTTTCCCTGAGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTTGAAGATGTTATGGGCTCGGTGACTTTTTTCCCTGAGTTCTG  100

seq1  TGTCCCATGATAGATAACTTGAATTC  126
      ||||||||||||||||||||||||||
seq2  TGTCCCATGATAGATAACTTGAATTC  126

seq1: chr11_88026411_88026662
seq2: B6Ng01-005E23.g_76_327

seq1  TTCATGAGGGAACATGGAAGGTTCTCTGCTGGAGTTCTGGCTACTTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAGGGAACATGGAAGGTTCTCTGCTGGAGTTCTGGCTACTTTATG  50

seq1  GGTTCCTAGTTCTACCATCCTCCAACCGTATCCCTTCCAACCCCCAACGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTAGTTCTACCATCCTCCAACCGTATCCCTTCCAACCCCCAACGC  100

seq1  AAGGTAGGAGAGAAAGAAGGCTAGAGGGGAAAGGGGGCTGTCGATCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGGAGAGAAAGAAGGCTAGAGGGGAAAGGGGGCTGTCGATCTCTT  150

seq1  TAGACTACTTCCTGCTGACTAGGGGAAGTTGGGTTCCTTGGGGCAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTACTTCCTGCTGACTAGGGGAAGTTGGGTTCCTTGGGGCAATATT  200

seq1  GATCTTTTCAGGATATCTCCAACCAGCAGCAGTGGTGGGAGTGGGGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTCAGGATATCTCCAACCAGCAGCAGTGGTGGGAGTGGGGAGGA  250

seq1  GG  252
      ||
seq2  GG  252