BAC Information

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BAC

Clone NameB6Ng01-006L14
Chromosome11 (Build37)
Map Location 11,771,092 - 11,924,210
singlet/doubletdoublet
Overlap geneDdc, Grb10
Upstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1
Downstream geneCobl, LOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006L14.bB6Ng01-006L14.g
ACCDH843506DH843507
length1,209981
definitionDH843506|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L14, 5' end.DH843507|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,771,092 - 11,772,319)(11,923,228 - 11,924,210)
sequence
gaattcaccaaggacggccatgaacccccgatcctcctgcttcctcctct
caactgttggtattacaggtgactctcagcctccctaactctagtagttc
atttttatcagcttccctacttacagtgacctagttatgacaaagggaca
tattcaaagactttaaaaaagaatggtttgagccacagggactgctggct
tgcccactctaatgcattagaatgaacaagaattacattctcaggcccac
tggagccctgctgagcttggctctctaggggcagaggctaggaagccatt
gagaacaaatcctctctgggagcttctgcagactgcatgcaacacgcgct
gcatctcccatcaccaagatgccaggcctctttcccagacagagactgtt
tacctttcaggggaaaggggactttgctaatgtgattacattaagaacct
tgacttggaaagattaccttggattatcggagtggacccaatcctatcac
atgggtccttaaaagtggagacccgatttcacatctgcagtcagaacatg
acagtgagagaaaggtcagcgagatggaatgcagctgctttgggaggtgg
agatgggagtagcaggccaaggaattccagaaggctttagaaaacttgag
gaggtgggggaaatggattttccccttgggcttttaagatgacagtcttg
attttagttcactaaaacctaggccagactttcagaaccataggataaga
aatgtatttaaagccactaagttgcatgtagcacccttaagaaagagacc
atacattggaggttaaaatacatgggaagttaaaacaaatagtcccagga
caacaagacaagggtcttgcttcctagtttactttgtccatagcagacat
gtgatcttccacaaaggcatttctttttgtcagcctcagtgctctcattc
ataagatatgtgggagctatcactgcttatcagagcttctgaaaaactat
atgttaacactcacacactcatatacctacaccccgagacttcttgattc
taaggttagttatacttctcagggtaaaaacattgaacttgaattgaaaa
aacacttaaggagggctgctgattaatggaagtcatgtctggtatacaat
tgttggtagatcaatttgccagggcatgaggaatctttaatccgcatttg
ggaggcaga
gaattcctgttgtgcttcttgccactccccatgtctggactagaaatcag
ggattatagctcctgcctagcagtattaagaattgcgtactaacggttag
aagaaggcagcagatggagttaatggcaatttcactaccagtctgaaggg
ggtaggagtagtgccagattggtagaattaaaatgtgagttatttttgtt
cttaaaccctctcctaaggatttccatcaccggttacacttctcagtgtc
atgtaattaccacccagaactgagctttggaaatttcagagaacagtgca
tcttttgaattttagaattaggtgacatttgggcgacagtctgaattcac
tgactttcaacctttgtggtcccacaaaaaccagacagttccatacttat
gacgtagaaagaatgccttatgaagctttcttgggttagcacaggtgaac
gtgccattgtagacctgggggactgtggtctgatgatacccagggtagca
gggtattaggcagaggtgggaaggggtatgaccttggagcacatactgct
cagcccacatcttcagactccatttagcccttgctgcatcagaaatggaa
tctactaccatcactgtgaggcccgttggagattctttagtttttttttt
tattattatttatacattttatttagagggtggctcaggcacagaccatg
cgtagaggttaccagacaatgtaagtcctcttctttcaccatgggggacc
tagggattgaatccaggttgctgtgcttgatggcaaacgactttatttga
tgaaccatctcaccagcccccatggctggttcctaatggacatgaagctg
gagaagagatgctgtgttctgggcttgtaccacgtgggctttggagtatt
agggcaaaagggtgggcaacttcttctggcagagttactgcctaactaga
ggacaacagcaaattgaggggtggtgtggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11771092_11772319
seq2: B6Ng01-006L14.b_46_1254

seq1  GAATTCACCAAGGACGGCCATGAACCCCCGATCCTCCTGCTTCCTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAGGACGGCCATGAACCCCCGATCCTCCTGCTTCCTCCTCT  50

seq1  CAACTGTTGGTATTACAGGTGACTCTCAGCCTCCCTAACTCTAGTAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTGGTATTACAGGTGACTCTCAGCCTCCCTAACTCTAGTAGTTC  100

seq1  ATTTTTATCAGCTTCCCTACTTACAGTGACCTAGTTATGACAAAGGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCAGCTTCCCTACTTACAGTGACCTAGTTATGACAAAGGGACA  150

seq1  TATTCAAAGACTTTAAAAAAGAATGGTTTGAGCCACAGGGACTGCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAGACTTTAAAAAAGAATGGTTTGAGCCACAGGGACTGCTGGCT  200

seq1  TGCCCACTCTAATGCATTAGAATGAACAAGAATTACATTCTCAGGCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACTCTAATGCATTAGAATGAACAAGAATTACATTCTCAGGCCCAC  250

seq1  TGGAGCCCTGCTGAGCTTGGCTCTCTAGGGGCAGAGGCTAGGAAGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCCTGCTGAGCTTGGCTCTCTAGGGGCAGAGGCTAGGAAGCCATT  300

seq1  GAGAACAAATCCTCTCTGGGAGCTTCTGCAGACTGCATGCAACACGCGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAAATCCTCTCTGGGAGCTTCTGCAGACTGCATGCAACACGCGCT  350

seq1  GCATCTCCCATCACCAAGATGCCAGGCCTCTTTCCCAGACAGAGACTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCCCATCACCAAGATGCCAGGCCTCTTTCCCAGACAGAGACTGTT  400

seq1  TACCTTTCAGGGGAAAGGGGACTTTGCTAATGTGATTACATTAAGAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCAGGGGAAAGGGGACTTTGCTAATGTGATTACATTAAGAACCT  450

seq1  TGACTTGGAAAGATTACCTTGGATTATCGGAGTGGACCCAATCCTATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGGAAAGATTACCTTGGATTATCGGAGTGGACCCAATCCTATCAC  500

seq1  ATGGGTCCTTAAAAGTGGAGACCCGATTTCACATCTGCAGTCAGAACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCCTTAAAAGTGGAGACCCGATTTCACATCTGCAGTCAGAACATG  550

seq1  ACAGTGAGAGAAAGGTCAGCGAGATGGAATGCAGCTGCTTTGGGAGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGAGAAAGGTCAGCGAGATGGAATGCAGCTGCTTTGGGAGGTGG  600

seq1  AGATGGGAGTAGCAGGCCAAGGAATTCCAGAAGGCTTTAGAAAACTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAGTAGCAGGCCAAGGAATTCCAGAAGGCTTTAGAAAACTTGAG  650

seq1  GAGGTGGGGGAAATGGATTTTCCCCTTGGGCTTTTAAGATGACAGTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGGGGAAATGGATTTTCCCCTTGGGCTTTTAAGATGACAGTCTTG  700

seq1  ATTTTAGTTCACTAAAACCTAGGCCAGACTTTCAGAACCATAGGATAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTCACTAAAACCTAGGCCAGACTTTCAGAACCATAGGATAAGA  750

seq1  AATGTATTTAAAGCCACTAAGTTGCATGTAGCACCCTTAAGAAAGAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTTAAAGCCACTAAGTTGCATGTAGCACCCTTAAGAAAGAGACC  800

seq1  ATACATTGGAGGTTAAAATACATGGGAAGTTAAAACAAATAGTCCCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGGAGGTTAAAATACATGGGAAGTTAAAACAAATAGTCCCAGGA  850

seq1  CAACAAGACAAGGGTCTTGCTTCCTAGTTTACTTTGTCCATAGCAGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGACAAGGGTCTTGCTTCCTAGTTTACTTTGTCCATAGCAGACAT  900

seq1  GTGATCTTCCACAAAGGCATT--CTTTTGTCAGCCTCAGTGCTCTCATCC  948
      |||||||||||||||||||||   |||||||||||||||||||||||| |
seq2  GTGATCTTCCACAAAGGCATTTCTTTTTGTCAGCCTCAGTGCTCTCATTC  950

seq1  ATAAGATATGT-GGAGCTATCACTGCTTATCAGAGCTTCTGAAAAAACTA  997
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  ATAAGATATGTGGGAGCTATCACTGCTTATCAGAGCTTCTG-AAAAACTA  999

seq1  TATGTTACACACACACACACACACACACACACACACACACAAACTTCTTG  1047
      |||||||   |||| ||||||| || | ||  |||| |  | ||||||||
seq2  TATGTTA---ACACTCACACACTCATATACCTACACCCCGAGACTTCTTG  1046

seq1  ATTCTAAGGTTAGTAATACTTTCTCAGTGTTAAAACCATGAACTTGACAT  1097
      |||||||||||||| |||| ||||||| || |||||  |||||||||  |
seq2  ATTCTAAGGTTAGTTATAC-TTCTCAGGGTAAAAACATTGAACTTGAATT  1095

seq1  GAGAAAAACAACATAAGGAGGGCTGCTGAGTTAATGGAGTTCATTGTCTG  1147
      || |||||| || |||||||||||||||| ||||||||  ||| ||||  
seq2  GA-AAAAAC-ACTTAAGGAGGGCTGCTGA-TTAATGGAAGTCA-TGTC--  1139

seq1  TGTTACAAAATGTTTTGTAAAGATTCACATTTGCCAGGGCATGATGGGAC  1197
      || || | |||  || ||| |   ||| |||||||||||||||| |    
seq2  TGGTATACAATTGTTGGTAGA---TCA-ATTTGCCAGGGCATGAGG----  1181

seq1  ATTCTTTTAATCCCAGCATTTGGGAGGCAGA  1228
      | || ||||||||  ||||||||||||||||
seq2  AATC-TTTAATCC--GCATTTGGGAGGCAGA  1209

seq1: chr11_11923228_11924210
seq2: B6Ng01-006L14.g_62_1042 (reverse)

seq1  TTCCACACCACCCCTCATTTTGCTGTTGTCCCTCTAGTTAGGCAGTAACT  50
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  TTCCACACCACCCCTCAATTTGCTGTTGT-CCTCTAGTTAGGCAGTAACT  49

seq1  CTGCCAGAAGAAGTTG-CCAACCTTTTGCCCTAATACTCCAAAGCCCACG  99
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  CTGCCAGAAGAAGTTGCCCACCCTTTTGCCCTAATACTCCAAAGCCCACG  99

seq1  TGGTTACAAGGCCCAGAACACAGCATCTCTTCTCCAGCTTCATGTCCATT  149
      ||| ||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGG-TACAA-GCCCAGAACACAGCATCTCTTCTCCAGCTTCATGTCCATT  147

seq1  AGGAACCAGCCATGGGGGCTGGTGAGATGGTTCATCAAATAAAGTCGTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCAGCCATGGGGGCTGGTGAGATGGTTCATCAAATAAAGTCGTTT  197

seq1  GCCATCAAGCACAGCAACCTGGATTCAATCCCTAGGTCCCCCATGGTGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCAAGCACAGCAACCTGGATTCAATCCCTAGGTCCCCCATGGTGAA  247

seq1  AGAAGAGGACTTACATTGTCTGGTAACCTCTACGCATGGTCTGTGCCTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGACTTACATTGTCTGGTAACCTCTACGCATGGTCTGTGCCTGA  297

seq1  GCCACCCTCTAAATAAAATGTATAAATAATAATAAAAAAAAAAACTAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCTCTAAATAAAATGTATAAATAATAATAAAAAAAAAAACTAAAG  347

seq1  AATCTCCAACGGGCCTCACAGTGATGGTAGTAGATTCCATTTCTGATGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCAACGGGCCTCACAGTGATGGTAGTAGATTCCATTTCTGATGCA  397

seq1  GCAAGGGCTAAATGGAGTCTGAAGATGTGGGCTGAGCAGTATGTGCTCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGCTAAATGGAGTCTGAAGATGTGGGCTGAGCAGTATGTGCTCCA  447

seq1  AGGTCATACCCCTTCCCACCTCTGCCTAATACCCTGCTACCCTGGGTATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATACCCCTTCCCACCTCTGCCTAATACCCTGCTACCCTGGGTATC  497

seq1  ATCAGACCACAGTCCCCCAGGTCTACAATGGCACGTTCACCTGTGCTAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACCACAGTCCCCCAGGTCTACAATGGCACGTTCACCTGTGCTAAC  547

seq1  CCAAGAAAGCTTCATAAGGCATTCTTTCTACGTCATAAGTATGGAACTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAAGCTTCATAAGGCATTCTTTCTACGTCATAAGTATGGAACTGT  597

seq1  CTGGTTTTTGTGGGACCACAAAGGTTGAAAGTCAGTGAATTCAGACTGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTTTGTGGGACCACAAAGGTTGAAAGTCAGTGAATTCAGACTGTC  647

seq1  GCCCAAATGTCACCTAATTCTAAAATTCAAAAGATGCACTGTTCTCTGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATGTCACCTAATTCTAAAATTCAAAAGATGCACTGTTCTCTGAA  697

seq1  ATTTCCAAAGCTCAGTTCTGGGTGGTAATTACATGACACTGAGAAGTGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAAGCTCAGTTCTGGGTGGTAATTACATGACACTGAGAAGTGTA  747

seq1  ACCGGTGATGGAAATCCTTAGGAGAGGGTTTAAGAACAAAAATAACTCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGTGATGGAAATCCTTAGGAGAGGGTTTAAGAACAAAAATAACTCAC  797

seq1  ATTTTAATTCTACCAATCTGGCACTACTCCTACCCCCTTCAGACTGGTAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTCTACCAATCTGGCACTACTCCTACCCCCTTCAGACTGGTAG  847

seq1  TGAAATTGCCATTAACTCCATCTGCTGCCTTCTTCTAACCGTTAGTACGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGCCATTAACTCCATCTGCTGCCTTCTTCTAACCGTTAGTACGC  897

seq1  AATTCTTAATACTGCTAGGCAGGAGCTATAATCCCTGATTTCTAGTCCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAATACTGCTAGGCAGGAGCTATAATCCCTGATTTCTAGTCCAG  947

seq1  ACATGGGGAGTGGCAAGAAGCACAACAGGAATTC  983
      ||||||||||||||||||||||||||||||||||
seq2  ACATGGGGAGTGGCAAGAAGCACAACAGGAATTC  981