BAC Information

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BAC

Clone NameB6Ng01-007B07
Chromosome11 (Build37)
Map Location 10,794,296 - 10,795,840
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007B07.bB6Ng01-007B07.g
ACCDH843758DH843759
length1,122304
definitionDH843758|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B07, 5' end.DH843759|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaataaaggaaaaaaggaaaacacacactggatttttaatga
cattaaaattttatgtgcacaacgatcttttctggatagtagtacagagg
tgtggttataactactaggagagctgtggagtacttggacagttttggtg
gaaaaaaattctgtcacaacaatagtgtaaaatctttgtttacagcagta
gaaaagacagaaaacacagcctttcccactccaatatcttttctttgtct
tcttttagtcttggagatgggagccacagcctgctgcctactaggcaagc
cctttaacactgagctatgcctaaagcatcctctgaatgaggagagccaa
tgagaaactcgacacaaagaccagctcctaaatgcggactgatattttcc
tcttcaccaattttttgactcttaaaaacaaaaggttagctatgttttca
taggcttcagaaagaatgaaatgtcttcagcatctttgtccattacaaaa
tatgatcaagttggtaaggatacaatttcaggtggtaggctttctcttgg
tgtggggacttggggacttggagtgggcctaacagtattaccacttgaat
gtcatatagtgttgggtggcagtttccattctgaatcttgctttgaatct
acagagcacttaacatgctgtcccaagtgtgtgtgtaaaagggacacatg
cagatatgtagctcatgctttgagttcattgtgttcatggatggatgtca
aaaattattagaaaaccataaatgatcatctttggtactatactcttgaa
aattataacatacaaaatataagcagtcttttctgagctcagggtaactg
agacatccaatgtataactcatgctttgggggtctctacctaccttttac
tgaacacttatgaggaccattcggtggagacataaagaaacaattctgaa
actgcacataagtgacattttcctcttccccctcaattatttattattat
tatttattaattaattacttaatttacagagaaagaaaaatctcacccaa
attttacagtaatcttgatagcaatgcagtaaaagcttgaaagtctgctt
cctgtctgatccccagaaagcc

ctgatttaattcaaataatttcaggaagaaagttttaggagatggtttta
attgttttgctggaaaattgaagttagagtctgaatgaaagaacctagtg
gggaaacccccactcaactccccgattaggcatgcactcaagaatcacaa
acagactatcttgatgtaaatacacaaggtagtttaatggcagagctcca
ggttgaaacgtatctcacacaggagacagtggatttgaccacgaggcttg
aaagctaggggtttttatagaaaagggtttggggctggggtgggaggaat
tggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10794296_10795840
seq2: B6Ng01-007B07.b_46_1167 (reverse)

seq1  GGCTTTCTGGAGGAAGGGATGTGTAAAGGGAAGCCAGCTTTGATACAGGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GAACAGGATGAATGGTAGCGATAAGTGTGGGTGATGAGAGCGATGGAGCA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCAGGACCTGGAAGAGGATTTACATTTGATGGATGATGGACTGAGATA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCTGGGAAAGAAGCAGGGTTGGCTATGTAACAGGTCATGGTAACCAGC  200
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGACTTCAGCCTGCGGGCATAGAAAACTGTTGAAGGGATTCACAAATG  250
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGTGACACAATGGGGTCCATTTAACCATGTTCCCTCTGGCCGTAGGAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAAATAGACTTGAAGTAACCAAGGTGAGAGAAGAAAATTTTTATTTG  350
                                                        
seq2  --------------------------------------------------  0

seq1  AGACACTATATGGAGAAATGGATGACCTACATAAAGGGGGCCTTTTCGTG  400
                                            |||  ||||  |
seq2  --------------------------------------GGC--TTTCTGG  10

seq1  GGGTCAGCACAGGGAAAAGCAGAACTTCTCAGCTTCTACTGCATTTGCTA  450
      || |||| |||||   |||||| ||||   ||||| ||||||| ||||||
seq2  GGATCAG-ACAGG---AAGCAG-ACTTTCAAGCTTTTACTGCA-TTGCTA  54

seq1  TCCAAAGATTACTGTAAAATTTGGGTGAGATATTTTACTTTCTACATGTA  500
      ||  |||||||||||||||||||||||||  ||||| ||||||   ||| 
seq2  TC--AAGATTACTGTAAAATTTGGGTGAG--ATTTTTCTTTCT--CTGT-  97

seq1  AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT  550
                 |||| || |  ||| || |  ||||||  | ||||| | 
seq2  -----------AAATTAAGT--AATTAATT--AATAAATAATAATAATAA  132

seq1  AAAATAGAGGAGGAAAGAGAAAATAGTCACTTATGTTGCAGTTTCAGAAT  600
      | ||| |||| || ||||| |||  |||||||||| ||||||||||||||
seq2  ATAATTGAGG-GGGAAGAGGAAAATGTCACTTATG-TGCAGTTTCAGAAT  180

seq1  TGTTTCTTTATGTCTCCAACTGAATGGTCCTCATAAAGTGTTCAGTAAAA  650
      ||||||||||||||||| || ||||||||||||| |||||||||||||||
seq2  TGTTTCTTTATGTCTCC-ACCGAATGGTCCTCAT-AAGTGTTCAGTAAAA  228

seq1  GGTAGGTAGAGACCCCCAAAAGCATGAGTTATACATTGGAATGTCTCAGT  700
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  GGTAGGTAGAGACCCCC-AAAGCATGAGTTATACATTGG-ATGTCTCAGT  276

seq1  TACCCTGAGCTCAGAAAAGACTGCTTATATTTTGTATGTTATAATTTTC-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACCCTGAGCTCAGAAAAGACTGCTTATATTTTGTATGTTATAATTTTCA  326

seq1  AGAGTATAGTACCAAAGATGATCATTTATGGTTTTCTAATAATTTTTGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATAGTACCAAAGATGATCATTTATGGTTTTCTAATAATTTTTGAC  376

seq1  ATCCATCCATGAACACAATGAACTCAAAGCATGAGCTACATATCTGCATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATGAACACAATGAACTCAAAGCATGAGCTACATATCTGCATG  426

seq1  TGTCCCTTTTACACACACACTTGGGACAGCATGTTAAGTGCTCTGTAGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTTTTACACACACACTTGGGACAGCATGTTAAGTGCTCTGTAGAT  476

seq1  TCAAAGCAAGATTCAGAATGGAAACTGCCACCCAACACTATATGACATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCAAGATTCAGAATGGAAACTGCCACCCAACACTATATGACATTC  526

seq1  AAGTGGTAATACTGTTAGGCCCACTCCAAGTCCCCAAGTCCCCACACCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTAATACTGTTAGGCCCACTCCAAGTCCCCAAGTCCCCACACCAA  576

seq1  GAGAAAGCCTACCACCTGAAATTGTATCCTTACCAACTTGATCATATTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGCCTACCACCTGAAATTGTATCCTTACCAACTTGATCATATTTT  626

seq1  GTAATGGACAAAGATGCTGAAGACATTTCATTCTTTCTGAAGCCTATGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGACAAAGATGCTGAAGACATTTCATTCTTTCTGAAGCCTATGAA  676

seq1  AACATAGCTAACCTTTTGTTTTTAAGAGTCAAAAAATTGGTGAAGAGGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCTAACCTTTTGTTTTTAAGAGTCAAAAAATTGGTGAAGAGGAA  726

seq1  AATATCAGTCCGCATTTAGGAGCTGGTCTTTGTGTCGAGTTTCTCATTGG  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGTCCGCATTTAGGAGCTGGTCTTTGTGTCGAGTTTCTCATTGG  776

seq1  CTCTCCTCATTCAGAGGATGCTTTAGGCATAGCTCAGTGTTAAAGGGCTT  1249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCATTCAGAGGATGCTTTAGGCATAGCTCAGTGTTAAAGGGCTT  826

seq1  GCCTAGTAGGCAGCAGGCTGTGGCTCCCATCTCCAAGACTAAAAGAAGAC  1299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTAGGCAGCAGGCTGTGGCTCCCATCTCCAAGACTAAAAGAAGAC  876

seq1  AAAGAAAAGATATTGGAGTGGGAAAGGCTGTGTTTTCTGTCTTTTCTACT  1349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGATATTGGAGTGGGAAAGGCTGTGTTTTCTGTCTTTTCTACT  926

seq1  GCTGTAAACAAAGATTTTACACTATTGTTGTGACAGAATTTTTTTCCACC  1399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAACAAAGATTTTACACTATTGTTGTGACAGAATTTTTTTCCACC  976

seq1  AAAACTGTCCAAGTACTCCACAGCTCTCCTAGTAGTTATAACCACACCTC  1449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTCCAAGTACTCCACAGCTCTCCTAGTAGTTATAACCACACCTC  1026

seq1  TGTACTACTATCCAGAAAAGATCGTTGTGCACATAAAATTTTAATGTCAT  1499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTACTATCCAGAAAAGATCGTTGTGCACATAAAATTTTAATGTCAT  1076

seq1  TAAAAATCCAGTGTGTGTTTTCCTTTTTTCCTTTATTAAAGAATTC  1545
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCCAGTGTGTGTTTTCCTTTTTTCCTTTATTAAAGAATTC  1122


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