BAC Information

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BAC

Clone NameB6Ng01-007E13
Chromosome11 (Build37)
Map Location 89,646,710 - 89,831,635
singlet/doubletdoublet
Overlap genenone
Upstream geneAkap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
Downstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1, LOC638903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007E13.bB6Ng01-007E13.g
ACCDH843902DH843903
length505792
definitionDH843902|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E13, 5' end.DH843903|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,831,125 - 89,831,635)(89,646,710 - 89,647,499)
sequence
tatcacaagatgtctggaaaacagtgaaatgggagttaaaagggcagata
gttaacaaggattagggttctggaaagaagaagtaataacacaaacactg
ggaatctgaaagccctttgagttgtgggtgtggggcagaacaggttgtgt
gagagcaaacagtatgctgtcacccgtgataaagaagggtaaagaattcc
accagaagtggatttactgtaaaaggcacaagtctccactagaaaccctt
cccttagaagtaagagatgaaccatactcatgggttcttaaacatgtgcc
agaagtggtcagttttccttggggaagtatctccggtgacgaaacccacg
ctatttggtagagagcactcacaggcagatggcaagtgggtttaacttat
atccagttttgagaatgatttcaaaactgtgtttgtcttcactagaaaaa
ataaaaagaaataatacaaattgtgaatgtcaggagttgcgtgggggggg
ggagg
gaattcttaactgagaagacgtctccatcatttacatgggagttccaagc
cccttgtgggcattgcctcctctaggtgcgtggtccttagaggggaaagg
aatgtggctaactgtggacctggagagtaagctaggaagcagtgttcctc
catagtgtctgcttacgtacctgctgccaggttcctgccctgagttgctg
ccctgacttccctcagtgatggactgttccttggaagtgtaagatgaaat
aaaccctttcctccctaagtagcttttgctcatgctatttatcacagcag
cagaaaagcaaactagtgcaaaatgcagtaacaggattgtttgagcttta
caagagtttaatgacgaggtttcttttatcttcgtgctatacttaccaat
ggccgatgtgaaataactcactaacgttcttggtcagcagtcacttctca
attcacacttgaagcttcttgctgccaaggccagtgcataatctgccttt
aaaattttatttgaacaaaaatttttatttatcataagcctgataagaaa
ggtgcttgtgagccttccatggtctacatagaactaagtggtaggtaaat
gtaaacaaaagctgtatttggaaacacctgtccagagatctgagtataat
ggttggtacataagaggtactcagtaaatgtctgctagataaatggatgg
agttagaaaaaaaatcatccctagtgaggtaagccagacacaaaaaatgg
gcaaatattgtatattttctcttatatgtggatgtgtgagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_89831125_89831635
seq2: B6Ng01-007E13.b_48_558 (reverse)

seq1  CCTCCCCCCCCCCACGCAACTCCTGACATTCACAATTTGTATTATTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCCCCCACGCAACTCCTGACATTCACAATTTGTATTATTTCTT  50

seq1  TTTATTTTTTCTAGTGAAGACAAACACAGTTTTGAAATCATTCTCAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTCTAGTGAAGACAAACACAGTTTTGAAATCATTCTCAAAAC  100

seq1  TGGATATAAGTTAAACCCACTTGCCATCTGCCTGTGAGTGCTCTCTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATAAGTTAAACCCACTTGCCATCTGCCTGTGAGTGCTCTCTACCA  150

seq1  AATAGCGTGGGTTTCGTCACCGGAGATACTTCCCCAAGGAAAACTGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCGTGGGTTTCGTCACCGGAGATACTTCCCCAAGGAAAACTGACCA  200

seq1  CTTCTGGCACATGTTTAAGAACCCATGAGTATGGTTCATCTCTTACTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGCACATGTTTAAGAACCCATGAGTATGGTTCATCTCTTACTTCT  250

seq1  AAGGGAAGGGTTTCTAGTGGAGACTTGTGCCTTTTACAGTAAATCCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGGGTTTCTAGTGGAGACTTGTGCCTTTTACAGTAAATCCACTT  300

seq1  CTGGTGGAATTCTTTACCCTTCTTTATCACGGGTGACAGCATACTGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGAATTCTTTACCCTTCTTTATCACGGGTGACAGCATACTGTTTG  350

seq1  CTCTCACACAACCTGTTCTGCCCCACACCCACAACTCAAAGGGCTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACACAACCTGTTCTGCCCCACACCCACAACTCAAAGGGCTTTCAG  400

seq1  ATTCCCAGTGTTTGTGTTATTACTTCTTCTTTCCAGAACCCTAATCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGTGTTTGTGTTATTACTTCTTCTTTCCAGAACCCTAATCCTTG  450

seq1  TTAACTATCTGCCCTTTTAACTCCCATTTCACTGTTTTCCAGACATCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATCTGCCCTTTTAACTCCCATTTCACTGTTTTCCAGACATCTTG  500

seq1  TGATAGAATTC  511
      |||||||||||
seq2  TGATAGAATTC  511

seq1: chr11_89646710_89647499
seq2: B6Ng01-007E13.g_69_860

seq1  GAATTCTTAACTGAGAAGACGTCTCCATCATTTACATGGGAGTTCCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACTGAGAAGACGTCTCCATCATTTACATGGGAGTTCCAAGC  50

seq1  CCCTTGTGGGCATTGCCTCCTCTAGGTGCGTGGTCCTTAGAGGGGAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTGGGCATTGCCTCCTCTAGGTGCGTGGTCCTTAGAGGGGAAAGG  100

seq1  AATGTGGCTAACTGTGGACCTGGAGAGTAAGCTAGGAAGCAGTGTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCTAACTGTGGACCTGGAGAGTAAGCTAGGAAGCAGTGTTCCTC  150

seq1  CATAGTGTCTGCTTACGTACCTGCTGCCAGGTTCCTGCCCTGAGTTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTCTGCTTACGTACCTGCTGCCAGGTTCCTGCCCTGAGTTGCTG  200

seq1  CCCTGACTTCCCTCAGTGATGGACTGTTCCTTGGAAGTGTAAGATGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACTTCCCTCAGTGATGGACTGTTCCTTGGAAGTGTAAGATGAAAT  250

seq1  AAACCCTTTCCTCCCTAAGTAGCTTTTGCTCATGCTATTTATCACAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTTCCTCCCTAAGTAGCTTTTGCTCATGCTATTTATCACAGCAG  300

seq1  CAGAAAAGCAAACTAGTGCAAAATGCAGTAACAGGATTGTTTGAGCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGCAAACTAGTGCAAAATGCAGTAACAGGATTGTTTGAGCTTTA  350

seq1  CAAGAGTTTAATGACGAGGTTTCTTTTATCTTCGTGCTATACTTACCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTTAATGACGAGGTTTCTTTTATCTTCGTGCTATACTTACCAAT  400

seq1  GGCCGATGTGAAATAACTCACTAACGTTCTTGGTCAGCAGTCACTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGATGTGAAATAACTCACTAACGTTCTTGGTCAGCAGTCACTTCTCA  450

seq1  ATTCACACTTGAAGCTTCTTGCTGCCAAGGCCAGTGCATAATCTGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACTTGAAGCTTCTTGCTGCCAAGGCCAGTGCATAATCTGCCTTT  500

seq1  AAAATTTTATTTGAACAAAAA-TTTTATTTATCATAAGCCTGATAAGAAA  549
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAATTTTATTTGAACAAAAATTTTTATTTATCATAAGCCTGATAAGAAA  550

seq1  GGTGCTTGTGAGCCTTCCATGGTCTACATAGAACTAAGTGGTAGGTAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTGTGAGCCTTCCATGGTCTACATAGAACTAAGTGGTAGGTAAAT  600

seq1  GTAAACAAAAGCTGTATTTGGAAACACCTGTCCAGAGATCTGAGTATAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAAAGCTGTATTTGGAAACACCTGTCCAGAGATCTGAGTATAAT  650

seq1  GGTTGGTACATAAGAGGTACTCAGTAAATGTCTGCTAGATAAATGGATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTACATAAGAGGTACTCAGTAAATGTCTGCTAGATAAATGGATGG  700

seq1  AGTTAGAAAAAAAATCATCCCTAGTGAGGTAAGCCAGACAC-AAAAATGG  748
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTTAGAAAAAAAATCATCCCTAGTGAGGTAAGCCAGACACAAAAAATGG  750

seq1  GCAAATATTGTATATTTTCTCTTATATGTGGATGTGTGAGTG  790
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATTGTATATTTTCTCTTATATGTGGATGTGTGAGTG  792