BAC Information

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BAC

Clone NameB6Ng01-008B24
Chromosome11 (Build37)
Map Location 36,363,397 - 36,508,363
singlet/doubletdoublet
Overlap geneOdz2
Upstream geneSlit3, Pank3, LOC666733, AI595406, Rars, Wwc1, LOC636532
Downstream geneLOC100039148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008B24.bB6Ng01-008B24.g
ACCDH844488DH844489
length1,157737
definitionDH844488|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B24, 5' end.DH844489|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,507,208 - 36,508,363)(36,363,397 - 36,364,133)
sequence
gaattctttggcctctctcatctgtttccagcttggttgagttacgacca
atcaaatatgaggaaaattagattttaatggaatatctgattttcattgc
ttaattgatttaattgcaagtttctgtttcagactggtagaaatgcaaag
actttcagtcaaatgtagaaaagctctcatttttctgtatttgacaatga
caaacttggtaagatatctttagcctagattctgggacattggaggaagg
ttgaccggcacctttctgaattgttattcataccctgtatttgtctctct
tttatataaatgcataaagaaatatgcataagtatacatattctatgtca
gaatcttgtgtttgtatttgtttattctggttgtattgacttaattctcg
tgtgtttttgtttgtcaaggaggacaaaatatgtgtgcttgtagaaacct
ataccttgtttaccagaacagcaaagaccacagactgttttttgttttgt
tttgttttgttttgtcttgtttctactgggaaagggaaaaacagccagaa
aggtcaatgtctagcttgtggtcaaggtcagtgggctctgtagttgtcta
agcttttcagagccttaagtgggagctagtatatgccagtagcaagtcac
actggatgcctaggacactgcaataagaagacttcctgatacaacacgaa
aggctcaacacaggtgtggacagcaggagtctgtctgtctccatgtctct
ctgtctttctgtctgtctgtctctttctctgtgttcctgtgtcactcttt
ctctctgtctccatctctctgtctatcacacacacacacacacacacaca
cacacacacacacacacacacacaccagtctgtactggttcatcatcccg
tcttttagacagccattatcagcaggcatctttgaccttctacattgact
ttctacagttagtgaaccaggcagcatcttttgtgagatagtgaaatccc
ctgacctcgttacatgctagctaggactagacctaataaacaattttttc
ttttctgttgttattgggtcatttgtttctaaatgagggactttctttat
ttcctaggaaggccttgagctccttaaactaaaaattatcctcctttttt
agcgcct
gaattccaagatccccagtagaggtgtgagcctgcagatagcagcctcat
gaacaagcctgtgcaagggtggcagctgggcccagacacagctgctggct
gattaacaggtggctaatgtgtagatagctcgggaaaaggctgactcgaa
tcttaggtgtgagaaagagggtagcctgcagtatcaccatgctacttaca
acagtacacgatttcaccagtgaaaacctatggactgcttattttcagat
ggtagccatttgatattttcccattctaggtaaattaaaatcccagaaag
caaagccagggacaaagaagattactgtgtctttgagtttagaggagaca
ccttaaaattctacttagcacaacattccagtgtttgcgccccgataatc
cctttgagcttcgatttcaaagactggacatattttccatctctgatttg
aaacatctcaaaaacttaggtcaaattttcatagacacatgcatttgttt
tcattaatcacagctcaaactctgacggtcttgtgtaccatttcctccgg
atttacatcgctaagcatgggattcatcctcagctttgaggatttacact
tttaaaaaggtaatttattaattcttttacaaaaatatctctgggcctgg
tgagatggctcagtggctcaaaagattgctattcatgctggaaaacctga
acaattcgaatttccaggatccatgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_36507208_36508363
seq2: B6Ng01-008B24.b_43_1199 (reverse)

seq1  AGGCGCTAAAAAGGGAGTATTA-TTTTAGTTTAA-GAGCTCAAGGCCCTC  48
      |||||||||||| |||| || | ||||||||||| |||||||||||| ||
seq2  AGGCGCTAAAAAAGGAGGATAATTTTTAGTTTAAGGAGCTCAAGGCCTTC  50

seq1  CTAGGAAATATAGCAAGTTCCTCATTTATGAAACAAAATGACCAAATAAA  98
      |||||||||| || |||| ||||||||| ||||| |||||||| ||| ||
seq2  CTAGGAAATAAAGAAAGTCCCTCATTTA-GAAAC-AAATGACCCAAT-AA  97

seq1  CAAACAAGAAAAGAAAATA-TGTTT-TTAGGTCTAGTCCTTAGCTAGCAC  146
      |||   ||||||||||| | ||||| ||||||||||||| ||||||||| 
seq2  CAA--CAGAAAAGAAAAAATTGTTTATTAGGTCTAGTCC-TAGCTAGCA-  143

seq1  TGTAACGAGGTCAGGGGATTTCACTATCTCAC-AAAGATGCCTGCCTGGT  195
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  TGTAACGAGGTCAGGGGATTTCACTATCTCACAAAAGATG-CTGCCTGGT  192

seq1  TCACT-ACTGTAGAAAGTCAATGTAGAAGGTCAAAGATGGCTGCTGAT-A  243
      ||||| ||||||||||||||||||||||||||||||||| |||||||| |
seq2  TCACTAACTGTAGAAAGTCAATGTAGAAGGTCAAAGATGCCTGCTGATAA  242

seq1  TGGCTGTCT-AAAGACGGGATGATG-ACCAGTACAGACTGGTGTGTGTGT  291
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  TGGCTGTCTAAAAGACGGGATGATGAACCAGTACAGACTGGTGTGTGTGT  292

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGACAGAGA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGACAGAGA  342

seq1  GATGGAGACAGAGAGAAAGAGTGACACAGGAACACAGAGAAAGAGACAGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGACAGAGAGAAAGAGTGACACAGGAACACAGAGAAAGAGACAGA  392

seq1  CAGACAGAAAGACAGAGAGACATGGAGACAGACAGACTCCTGCTGTCCAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAAAGACAGAGAGACATGGAGACAGACAGACTCCTGCTGTCCAC  442

seq1  ACCTGTGTTGAGCCTTTCGTGTTGTATCAGGAAGTCTTCTTATTGCAGTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGTTGAGCCTTTCGTGTTGTATCAGGAAGTCTTCTTATTGCAGTG  492

seq1  TCCTAGGCATCCAGTGTGACTTGCTACTGGCATATACTAGCTCCCACTTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGCATCCAGTGTGACTTGCTACTGGCATATACTAGCTCCCACTTA  542

seq1  AGGCTCTGAAAAGCTTAGACAACTACAGAGCCCACTGACCTTGACCACAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGAAAAGCTTAGACAACTACAGAGCCCACTGACCTTGACCACAA  592

seq1  GCTAGACATTGACCTTTCTGGCTGTTTTTCCCTTTCCCAGTAGAAACAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACATTGACCTTTCTGGCTGTTTTTCCCTTTCCCAGTAGAAACAAG  642

seq1  ACAAAACAAAACAAAACAAAACAAAAAACAGTCTGTGGTCTTTGCTGTTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAACAAAAAACAGTCTGTGGTCTTTGCTGTTC  692

seq1  TGGTAAACAAGGTATAGGTTTCTACAAGCACACATATTTTGTCCTCCTTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAACAAGGTATAGGTTTCTACAAGCACACATATTTTGTCCTCCTTG  742

seq1  ACAAACAAAAACACACGAGAATTAAGTCAATACAACCAGAATAAACAAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAACACACGAGAATTAAGTCAATACAACCAGAATAAACAAAT  792

seq1  ACAAACACAAGATTCTGACATAGAATATGTATACTTATGCATATTTCTTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAAGATTCTGACATAGAATATGTATACTTATGCATATTTCTTT  842

seq1  ATGCATTTATATAAAAGAGAGACAAATACAGGGTATGAATAACAATTCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTATATAAAAGAGAGACAAATACAGGGTATGAATAACAATTCAG  892

seq1  AAAGGTGCCGGTCAACCTTCCTCCAATGTCCCAGAATCTAGGCTAAAGAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGCCGGTCAACCTTCCTCCAATGTCCCAGAATCTAGGCTAAAGAT  942

seq1  ATCTTACCAAGTTTGTCATTGTCAAATACAGAAAAATGAGAGCTTTTCTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACCAAGTTTGTCATTGTCAAATACAGAAAAATGAGAGCTTTTCTA  992

seq1  CATTTGACTGAAAGTCTTTGCATTTCTACCAGTCTGAAACAGAAACTTGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACTGAAAGTCTTTGCATTTCTACCAGTCTGAAACAGAAACTTGC  1042

seq1  AATTAAATCAATTAAGCAATGAAAATCAGATATTCCATTAAAATCTAATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATCAATTAAGCAATGAAAATCAGATATTCCATTAAAATCTAATT  1092

seq1  TTCCTCATATTTGATTGGTCGTAACTCAACCAAGCTGGAAACAGATGAGA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATATTTGATTGGTCGTAACTCAACCAAGCTGGAAACAGATGAGA  1142

seq1  GAGGCCAAAGAATTC  1156
      |||||||||||||||
seq2  GAGGCCAAAGAATTC  1157

seq1: chr11_36363397_36364133
seq2: B6Ng01-008B24.g_65_801

seq1  GAATTCCAAGATCCCCAGTAGAGGTGTGAGCCTGCAGATAGCAGCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATCCCCAGTAGAGGTGTGAGCCTGCAGATAGCAGCCTCAT  50

seq1  GAACAAGCCTGTGCAAGGGTGGCAGCTGGGCCCAGACACAGCTGCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCCTGTGCAAGGGTGGCAGCTGGGCCCAGACACAGCTGCTGGCT  100

seq1  GATTAACAGGTGGCTAATGTGTAGATAGCTCGGGAAAAGGCTGACTCGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACAGGTGGCTAATGTGTAGATAGCTCGGGAAAAGGCTGACTCGAA  150

seq1  TCTTAGGTGTGAGAAAGAGGGTAGCCTGCAGTATCACCATGCTACTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTGTGAGAAAGAGGGTAGCCTGCAGTATCACCATGCTACTTACA  200

seq1  ACAGTACACGATTTCACCAGTGAAAACCTATGGACTGCTTATTTTCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACACGATTTCACCAGTGAAAACCTATGGACTGCTTATTTTCAGAT  250

seq1  GGTAGCCATTTGATATTTTCCCATTCTAGGTAAATTAAAATCCCAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCCATTTGATATTTTCCCATTCTAGGTAAATTAAAATCCCAGAAAG  300

seq1  CAAAGCCAGGGACAAAGAAGATTACTGTGTCTTTGAGTTTAGAGGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCAGGGACAAAGAAGATTACTGTGTCTTTGAGTTTAGAGGAGACA  350

seq1  CCTTAAAATTCTACTTAGCACAACATTCCAGTGTTTGCGCCCCGATAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATTCTACTTAGCACAACATTCCAGTGTTTGCGCCCCGATAATC  400

seq1  CCTTTGAGCTTCGATTTCAAAGACTGGACATATTTTCCATCTCTGATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAGCTTCGATTTCAAAGACTGGACATATTTTCCATCTCTGATTTG  450

seq1  AAACATCTCAAAAACTTAGGTCAAATTTTCATAGACACATGCATTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTCAAAAACTTAGGTCAAATTTTCATAGACACATGCATTTGTTT  500

seq1  TCATTAATCACAGCTCAAACTCTGACGGTCTTGTGTACCATTTCCTCCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATCACAGCTCAAACTCTGACGGTCTTGTGTACCATTTCCTCCGG  550

seq1  ATTTACATCGCTAAGCATGGGATTCATCCTCAGCTTTGAGGATTTACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATCGCTAAGCATGGGATTCATCCTCAGCTTTGAGGATTTACACT  600

seq1  TTTAAAAAGGTAATTTATTAATTCTTTTACAAAAATATCTCTGGGCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGGTAATTTATTAATTCTTTTACAAAAATATCTCTGGGCCTGG  650

seq1  TGAGATGGCTCAGTGGCTCAAAAGATTGCTATTCATGCTGGAAAACCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGCTCAGTGGCTCAAAAGATTGCTATTCATGCTGGAAAACCTGA  700

seq1  ACAATTCGAATTTCCAGGATCCATGTGTGTGTGTGTG  737
      |||||||||||||||||||||||||||||||||||||
seq2  ACAATTCGAATTTCCAGGATCCATGTGTGTGTGTGTG  737