BAC Information

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BAC

Clone NameB6Ng01-008K09
Chromosome11 (Build37)
Map Location 7,687,907 - 7,836,930
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3, LOC638720, Pkd1l1, LOC624800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008K09.bB6Ng01-008K09.g
ACCDH844837DH844838
length960930
definitionDH844837|Mus musculus domesticus DNA, BAC clone: B6Ng01-008K09, 5' end.DH844838|Mus musculus domesticus DNA, BAC clone: B6Ng01-008K09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,835,971 - 7,836,930)(7,687,907 - 7,688,591)
sequence
gaattctatccattttctccagtgttcattgtttccagttcacaccagca
cgcaggacctctctccagctcacactggcatccatgatgtctccctagct
cacactagcacgcaggtcttctttttaacacaaagcccactgtagtcaat
cccctcaattacatatctctccagaggatgatattgatttttaaaaactt
tacttcttaaattatttttttaaatatttttaaataaaatataaataatt
atcttatttaccccttccctttactacctccaattcctcccacacctttt
cccctttactccctctcaaaccaaccaatggttattgtttattattgttt
ctctatctctttcacacacacacacacacacacacacacacacacggggg
tgcagtaggtggcaagacagatataaaaatatactataacctcctgagtc
cattcggttgtttatatgtatgaatttcatggataactactcattaaata
gtcaattagaaggttcattcctagaagggactaagtctccttaaacaatc
attatttgtctatagttccttgtctaacagtgggacttctcttctgcctt
agtgtgtctgttaataatgtcattgttcaggtcttgtttagttcagcaag
ttctaagagacacattctttttcctggtcctctggctcttacaatctttt
ctgtcccctctttccactatgttccctgagccacggattcaaacgctgtt
gctacagatgtattcagtagattatgggatccactgataaaggaatcttg
ttttgttctcagtttgttttctgttgctataagagaagcttcttctttgg
ggatatgaaggtctctgtggtttaagatattttagaaaacattgttctta
ttatctttgatctttaagaaaaacttccttactgacttgggaacctgtga
ctctagtgac

gaattcaatagaataattacaactgcatctaaacaacttaaagtagacac
aaatgcactctaagagaataaaaaagccaagatgaataaagaagcctaat
acaagatacaaaagtggagctcaatacctagaattattgaagaaaatcaa
ggtaaaatgatactggacgtgaaaaactgaagaagccaaatcaaaagctt
taccaacaaaatgtgggaaacaatatcaggaatggaagacaaagggaccc
ctcatttactactggtggcattgcaaactggtacagccactctagaaatc
agtatggaggatcctaaaagctttccacatggcccagctctccccctcat
tggagtatgccaaccatcttgacatcttctaccaccacagatacttgctc
agccatgtacattgttgctctattcacagtcactaggaaatgaaaacaac
ctaaatgtccttcaagagacagatgaataataaaaactatggtacataca
cactatgggatactcttcagctatacagagaaataaaattatgaacttca
caagtaaatgaatgcaactagaaaaatattatatccagtgaggtaaatca
gctgcaggaaaaaaaaagtcacatgttctctctctttttagtctcctagc
cccaatctctcagatgtcagtatataacctggacaattgtagaaacaaag
aaaaaaatcattgcggtattaggagcttggaaaataatagaaaatggaaa
tagcagggtacaagtgatactatgggggaatgagaaaatagggcaggact
acaattggcagaggagcagggaataaatacagaagaagaagagagaggaa
ggtttttactaacagtaaaaatgcctggaaaagtcataaggaaacgatta
cttaaaatatctatggtatatgtaaacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7835971_7836930
seq2: B6Ng01-008K09.b_48_1007 (reverse)

seq1  GTCACTAGAGTCACAGGTTCCCAAGGTCAGTAAGG-AGTCTTTGCTTAAG  49
      |||||||||||||||||||||||| |||||||||| ||| |||  | |||
seq2  GTCACTAGAGTCACAGGTTCCCAA-GTCAGTAAGGAAGTTTTTCTTAAAG  49

seq1  ATCAAGGTTATTCAGAACAATGTATTCTAAAATCTCTTTAAACCCACAGA  99
      ||||| | || | |||||||||| ||||||||| ||||  || |||||||
seq2  ATCAAAGATAATAAGAACAATGTTTTCTAAAATATCTT--AAACCACAGA  97

seq1  TGACCTTCATATCCCCATAGAAGAAGCTTCTCTCTATAGCAAACAGAAAA  149
       |||||||||||||||| ||||||||||||||| |||||| |||||||||
seq2  -GACCTTCATATCCCCAAAGAAGAAGCTTCTCT-TATAGC-AACAGAAAA  144

seq1  CAACACTGAGAAC-AAACAAGATTCCTTTATCAGTGGATCCCATAATCTA  198
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAA-ACTGAGAACAAAACAAGATTCCTTTATCAGTGGATCCCATAATCTA  193

seq1  CTGAATACATCTGTAGC-ACAGCGTTTGAATCCGTGGCTCAGGGAACATA  247
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGAATACATCTGTAGCAACAGCGTTTGAATCCGTGGCTCAGGGAACATA  243

seq1  GTGG-AAGAGGGGACAG-AAAGATTGTAAGAGCCAGAGGACCAGG-AAAA  294
      |||| |||||||||||| ||||||||||||||||||||||||||| ||||
seq2  GTGGAAAGAGGGGACAGAAAAGATTGTAAGAGCCAGAGGACCAGGAAAAA  293

seq1  GAATGTGTCTCTTAGAACTTGCTG-ACTAAACAAGACCTGAACAATGACA  343
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAATGTGTCTCTTAGAACTTGCTGAACTAAACAAGACCTGAACAATGACA  343

seq1  TTATTAACAGACACACTAAGGCAGAAGAGAAGTCCCACTGTTAGACAAGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAACAGACACACTAAGGCAGAAGAGAAGTCCCACTGTTAGACAAGG  393

seq1  AACTATAGACAAATAATGATTGTTTAAGGAGACTTAGTCCCTTCTAGGAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGACAAATAATGATTGTTTAAGGAGACTTAGTCCCTTCTAGGAA  443

seq1  TGAACCTTCTAATTGACTATTTAATGAGTAGTTATCCATGAAATTCATAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTTCTAATTGACTATTTAATGAGTAGTTATCCATGAAATTCATAC  493

seq1  ATATAAACAACCGAATGGACTCAGGAGGTTATAGTATATTTTTATATCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACAACCGAATGGACTCAGGAGGTTATAGTATATTTTTATATCTG  543

seq1  TCTTGCCACCTACTGCACCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCACCTACTGCACCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  593

seq1  GTGTGAAAGAGATAGAGAAACAATAATAAACAATAACCATTGGTTGGTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAGAGATAGAGAAACAATAATAAACAATAACCATTGGTTGGTTT  643

seq1  GAGAGGGAGTAAAGGGGAAAAGGTGTGGGAGGAATTGGAGGTAGTAAAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGTAAAGGGGAAAAGGTGTGGGAGGAATTGGAGGTAGTAAAGG  693

seq1  GAAGGGGTAAATAAGATAATTATTTATATTTTATTTAAAAATATTTAAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGTAAATAAGATAATTATTTATATTTTATTTAAAAATATTTAAAA  743

seq1  AAATAATTTAAGAAGTAAAGTTTTTAAAAATCAATATCATCCTCTGGAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTTAAGAAGTAAAGTTTTTAAAAATCAATATCATCCTCTGGAGA  793

seq1  GATATGTAATTGAGGGGATTGACTACAGTGGGCTTTGTGTTAAAAAGAAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTAATTGAGGGGATTGACTACAGTGGGCTTTGTGTTAAAAAGAAG  843

seq1  ACCTGCGTGCTAGTGTGAGCTAGGGAGACATCATGGATGCCAGTGTGAGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCGTGCTAGTGTGAGCTAGGGAGACATCATGGATGCCAGTGTGAGC  893

seq1  TGGAGAGAGGTCCTGCGTGCTGGTGTGAACTGGAAACAATGAACACTGGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGAGGTCCTGCGTGCTGGTGTGAACTGGAAACAATGAACACTGGA  943

seq1  GAAAATGGATAGAATTC  960
      |||||||||||||||||
seq2  GAAAATGGATAGAATTC  960


seq1: chr11_7687907_7688591
seq2: B6Ng01-008K09.g_68_752

seq1  GAATTCAATAGAATAATTACAACTGCATCTAAACAACTTAAAGTAGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGAATAATTACAACTGCATCTAAACAACTTAAAGTAGACAC  50

seq1  AAATGCACTCTAAGAGAATAAAAAAGCCAAGATGAATAAAGAAGCCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACTCTAAGAGAATAAAAAAGCCAAGATGAATAAAGAAGCCTAAT  100

seq1  ACAAGATACAAAAGTGGAGCTCAATACCTAGAATTATTGAAGAAAATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATACAAAAGTGGAGCTCAATACCTAGAATTATTGAAGAAAATCAA  150

seq1  GGTAAAATGATACTGGACGTGAAAAACTGAAGAAGCCAAATCAAAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATGATACTGGACGTGAAAAACTGAAGAAGCCAAATCAAAAGCTT  200

seq1  TACCAACAAAATGTGGGAAACAATATCAGGAATGGAAGACAAAGGGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACAAAATGTGGGAAACAATATCAGGAATGGAAGACAAAGGGACCC  250

seq1  CTCATTTACTACTGGTGGCATTGCAAACTGGTACAGCCACTCTAGAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTACTACTGGTGGCATTGCAAACTGGTACAGCCACTCTAGAAATC  300

seq1  AGTATGGAGGATCCTAAAAGCTTTCCACATGGCCCAGCTCTCCCCCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGAGGATCCTAAAAGCTTTCCACATGGCCCAGCTCTCCCCCTCAT  350

seq1  TGGAGTATGCCAACCATCTTGACATCTTCTACCACCACAGATACTTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTATGCCAACCATCTTGACATCTTCTACCACCACAGATACTTGCTC  400

seq1  AGCCATGTACATTGTTGCTCTATTCACAGTCACTAGGAAATGAAAACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTACATTGTTGCTCTATTCACAGTCACTAGGAAATGAAAACAAC  450

seq1  CTAAATGTCCTTCAAGAGACAGATGAATAATAAAAACTATGGTACATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTCCTTCAAGAGACAGATGAATAATAAAAACTATGGTACATACA  500

seq1  CACTATGGGATACTCTTCAGCTATACAGAGAAATAAAATTATGAACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGGGATACTCTTCAGCTATACAGAGAAATAAAATTATGAACTTCA  550

seq1  CAAGTAAATGAATGCAACTAGAAAAATATTATATCCAGTGAGGTAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAATGAATGCAACTAGAAAAATATTATATCCAGTGAGGTAAATCA  600

seq1  GCTGCAGGAAAAAAAAAGTCACATGTTCTCTCTCTTTTTAGTCTCCTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGAAAAAAAAAGTCACATGTTCTCTCTCTTTTTAGTCTCCTAGC  650

seq1  CCCAATCTCTCAGATGTCAGTATATAACCTGGACA  685
      |||||||||||||||||||||||||||||||||||
seq2  CCCAATCTCTCAGATGTCAGTATATAACCTGGACA  685


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