BAC Information

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BAC

Clone NameB6Ng01-010A09
Chromosome11 (Build37)
Map Location 19,627,306 - 19,628,302
singlet/doubletsinglet
Overlap genenone
Upstream geneMeis1, LOC635455, LOC100042708, Glns-ps1
Downstream geneLOC665868, LOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010A09.bB6Ng01-010A09.g
ACCDH845811DH845812
length1,138989
definitionDH845811|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A09, 5' end.DH845812|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagtcaacttcagcttcatagtgccaatgtctgggatccacac
acgatcttcaaagggctagcatcacttctccagctctaccctctgtagca
ctctaggctctgcttgactccactgctgttgtggttcttggtgattatct
catggtactggcatctccaatatgctggggtcttccgctgcaactagact
tcaccaacaacctctcataggctctcttcacggtgccaagcttcaacttc
tttacatgacccctttagtcctgggctgtcaactgaaactgaggttgcac
cttcaccaatggccttccatggcctctcacagtaccaagcctcagctgtt
gtccatgatcccttcatgccttcaagaccagtaccacctggtcttgcgaa
gtacagctgtagcacgaggtacaaccttgactatctctggaatacagctt
ctttgtgctctcagaaaacacttcccagaagatattacctcagtgatgct
ggtcccttcttaatcaccactaatttcttagttccagctaactagcatcc
aatgtcccagtaatctccttctcttgactataaagccagagccaaatggc
caaagctgccaagttctgctgcttgctaggcctggaacatggtcctcttg
ttctattacattatcaccagtttgctgttttccagctccttcactgccta
agcttggctgtcctggaacttgctctgtagattgaccttggactcagagt
tctccatggctgtgtctcccgaatgctgggattaaaggcatgtaacacca
tgctttggatttaaacttttctctccttggcacttgctctttcccgggct
ggtcttgatctcaagagatttgcttgcctctgtcttcctgggattcaagg
tgtgtgccaccaagcctggacctaaacttagctgggtgagatcttgtcca
agggactatttccttaattcaatttattatccttgaacacagaatcacct
cattcacttcctggtcccttttatactgaacaatattttatattttcctt
ttagctgctgtgctgctgaatgcccttcagaatcttaccagagaacaagg
ctcgcggacactttgagactctcttgtcaagcatatat
gaattcatccttagttaaaaagtcaggaagacaatagacgaattgggaaa
ggaaaaagaaaagagatgaatcagctagacttaaggggaaaatactgaaa
cactgagattcaggacaattaccgtgagcatgatagtattatctatcatc
agatttagaaaaatgtagagactgattctgctggcatggcttttgtcact
ggtgcactgtgccttgctagagagaatgccaggtgttgccatcgcttcca
aagtagcctactaacagggacagaaacactcattgatgctctcttcgaag
aaaggggtcactcacaaacactgattcttcttctttagacacaaatgtag
ttccagatgtcgtcagtcagctatggtactagactcacttgttaatggaa
acagagatcgctcagcctggccctctgaatgactgtgtggtgccgggact
cctgacgacttgacagtaacttggactggtttgtcttaatctagctgaaa
catttatgtgtagaactatttgttacaactaccttactatagtctatatg
tcctttgatccgctaatatccctcacaagtgtcttaattaagggctgtaa
ataaccgtacataagatttcactgagacaattctgtgggtaaggaaacag
ctggaaagaccagaaataacctgaggatccatcacaggttggagtgaagg
aaccatgggacatccatgccacggagcagtgtgtgtcagccatatgatat
ttccatgcctgctgacccagagaaagacccatgatagagagaagcaataa
gcaaagaaatgcttcatgcactcagattcgtgttgaaacagaaaagaatg
gaattttgcttatttatacattccatggatgttcttgtgatggtggagaa
aggtttgcagcactgatttagtttccctgttagttacctctggaagcaag
accaggaaacactgggaaggaggaggatggtgattgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19627306_19628302
seq2: B6Ng01-010A09.g_65_1053

seq1  GAATTCATCCTTAGTTAAAAAGTCAGGAAGACAATAGACGAATTGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTTAGTTAAAAAGTCAGGAAGACAATAGACGAATTGGGAAA  50

seq1  GGAAAAAGAAAAGAGATGAATCAGCTAGACTTAAGGGGAAAATACTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAAAAGAGATGAATCAGCTAGACTTAAGGGGAAAATACTGAAA  100

seq1  CACTGAGATTCAGGACAATTACCGTGAGCATGATAGTATTATCTATCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGATTCAGGACAATTACCGTGAGCATGATAGTATTATCTATCATC  150

seq1  AGATTTAGAAAAATGTAGAGACTGATTCTGCTGGCATGGCTTTTGTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGAAAAATGTAGAGACTGATTCTGCTGGCATGGCTTTTGTCACT  200

seq1  GGTGCACTGTGCCTTGCTAGAGAGAATGCCAGGTGTTGCCATCGCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCACTGTGCCTTGCTAGAGAGAATGCCAGGTGTTGCCATCGCTTCCA  250

seq1  AAGTAGCCTACTAACAGGGACAGAAACACTCATTGATGCTCTCTTCGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCCTACTAACAGGGACAGAAACACTCATTGATGCTCTCTTCGAAG  300

seq1  AAAGGGGTCACTCACAAACACTGATTCTTCTTCTTTAGACACAAATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGTCACTCACAAACACTGATTCTTCTTCTTTAGACACAAATGTAG  350

seq1  TTCCAGATGTCGTCAGTCAGCTATGGTACTAGACTCACTTGTTAATGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATGTCGTCAGTCAGCTATGGTACTAGACTCACTTGTTAATGGAA  400

seq1  ACAGAGATCGCTCAGCCTGGCCCTCTGAATGACTGTGTGGTGCCGGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATCGCTCAGCCTGGCCCTCTGAATGACTGTGTGGTGCCGGGACT  450

seq1  CCTGACGACTTGACAGTAACTTGGACTGGTTTGTCTTAATCTAGCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACGACTTGACAGTAACTTGGACTGGTTTGTCTTAATCTAGCTGAAA  500

seq1  CATTTATGTGTAGAACTATTTGTTACAACTACCTTACTATAGTCTATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGTGTAGAACTATTTGTTACAACTACCTTACTATAGTCTATATG  550

seq1  TCCTTTGATCCGCTAATATCCCTCACAAGTGTCTTAATTAAGGGCTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGATCCGCTAATATCCCTCACAAGTGTCTTAATTAAGGGCTGTAA  600

seq1  ATAACCGTACATAAGATTTCACTGAGACAATTCTGTGGGTAAGGAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCGTACATAAGATTTCACTGAGACAATTCTGTGGGTAAGGAAACAG  650

seq1  CTGGAAAGACCAGAAATAACCTGAGGATCCATCACAGGTTGGAGTGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGACCAGAAATAACCTGAGGATCCATCACAGGTTGGAGTGAAGG  700

seq1  AACCATGGGACATCCATGCCACGGAGCAGTGTGTGTCAGCCATATGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGGGACATCCATGCCACGGAGCAGTGTGTGTCAGCCATATGATAT  750

seq1  TTCCATGCCTGCTGACCCAGAGAAAGACCCATGATAGAGAGAAGCAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGCCTGCTGACCCAGAGAAAGACCCATGATAGAGAGAAGCAATAA  800

seq1  GCAAAGAAATGCTTCATGCACTCAGATTCGTGTTGAAACAGAAAAGAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAATGCTTCATGCACTCAGATTCGTGTTGAAACAGAAAAGAATG  850

seq1  GAATTTTGCTTATTTATACATTCCATGGATGTTCTTGTGATGGTGGAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGCTTATTTATACATTCCATGGATGTTCTTGTGATGGTGGAGAA  900

seq1  AGGTTTGCAGCACTGAATTAAGTTTTCCATGTTAGTTACCTCTGGAAGCA  950
      |||||||||||||||| |||   ||||| |||||||||||||||||||| 
seq2  AGGTTTGCAGCACTGATTTA--GTTTCCCTGTTAGTTACCTCTGGAAGC-  947

seq1  AAGACCAGGAAAACACTGGGAAAGGAGGAGGGATTGGTGAGATGCAA  997
      ||||||||| |||||||||| ||||||||||   ||||||  |||||
seq2  AAGACCAGG-AAACACTGGG-AAGGAGGAGG--ATGGTGA-TTGCAA  989