BAC Information

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BAC

Clone NameB6Ng01-010G16
Chromosome11 (Build37)
Map Location 23,215,544 - 23,358,694
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042146, Tmem17, LOC100042827, LOC100042846, LOC666078, B3gnt2, 9130230N09Rik, Commd1, Zrsr1, Cct4, 4930430E16Rik, LOC100042875, Xpo1, LOC100042202
Downstream geneAhsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010G16.bB6Ng01-010G16.g
ACCDH846090DH846091
length1,176710
definitionDH846090|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G16, 5' end.DH846091|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,357,482 - 23,358,694)(23,215,544 - 23,216,253)
sequence
gaattcatttttcctgtctaatagaaaaaattcagtaaattatggcaata
aaacaagtatgttctattgaaaactttgtattatttcttttgcaatctct
gaacccccaaatcacttactttgattttttaaaaatgtactaaagatgct
tctgttttatgaaaaatgaccttttctttctttggcatggaggataagat
agtgtctctctacatagccccggctctcctgaaattcactatgtaaacca
gactggcctttgtctgcctcctgaatcctgggattgtgaaatggtttcta
cctaaatcagacatgcatgacactgtgctccaccttccattaccactcca
aatacaccaaactctggagagtttatgatacatgctgtaaacactgaagt
atggtatagaagtagcactctgatatatagaatttatatgtatgtattca
tattaagttggaaaactatatttgcaataaagggagaattaactgttagt
taaaattatatacctattagcaaacccttacatacctcaggtgtcaactt
tgctattgaagtgaaaagcatagatacaatctgaaacagaaaaagtagga
ttttagaatactatttttaaaacatttaaaaaagttgaagactcctttca
gtacttacatgttctgcaagtcgattgttgtaccgacacaggctaaaaat
tagattacaagtttgtcttatattgatgccatcacgaatgtgttgaaata
agaagggaaatccctgttaaaaacacaagttgttcgtttgagaactacta
tatcatttttagaatgactgaattgtttaatctagtaaaggtataccttt
cctcctgttaatgcagccatgtcagtctgtgacatgtcaatgcctaaaag
aaaatattagtgggaaataaatctttcccatgtggactagcttttagcta
ttacagcatgacatgcatgaaactgtcaagtctattataacaatatcacc
tgcacataaattggggacaggagagggttgatgctagatttcttactaag
catctagcaatttcagactgcacatgaaccctgagttaccttattctatc
attaatcataaaattattatgaaatgctaatgtttatttaatttgaaggc
atttttttctgaatctgaagaaatat
gaattccagttgataggcttggtggtaatcattttaatcatttaattaat
tttaaattaatcttgctggcttaaagattgctcaatatgttgccttggct
agttggaactgtatttgtagaccaggctagccccaaacttaattctctgc
ctcccaagtatgttagcatgtgtggttaggttgctgatctttaaactata
gttctagtgctatgaacgctagtcgtaaagtttcatgtatttctatgtgc
tatttgaagagttttaaatttttattttaatttttgaagcctttatttat
ttgaatcaaggtctcctgtaacccaggctagtctcaaacttgatatgtac
ctgaggaggaccttgaacttccttgaagctagttaaaggtttatagtaaa
ttaaacaccttcactgtggaaagaatggtttcagcagtcctaggtaaata
ctgagtttttctctttggaagtaaataaaagtttattcatttttcaaaga
tgatgtatatgtgtatgtttatgttactctgtgttttatattatttttgt
tttagagactgctattagctaccttaggcagcttcaaatttccatggcag
tctccctgattctgtgtgctggacttcataggcatgaattgctaggtctg
gttttattagcatttgttcagaaagagaaagctaggagtggtgatggtgt
aggtaggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_23357482_23358694
seq2: B6Ng01-010G16.b_43_1218 (reverse)

seq1  ATATTTCTT-AGAATTTCAGAAAAAATAGCTGTCAAAATAAAATAACACC  49
      ||||||||| |||  |||||||||||  ||  ||||| ||||  ||||  
seq2  ATATTTCTTCAGA--TTCAGAAAAAAATGCCTTCAAATTAAATAAACA--  46

seq1  CATTTTAGCATTTTAATATATTAATTTTATTGATTTAATGAAATAGAAAT  99
          |||||||||    ||| |||||||| ||| ||||||  |||| |||
seq2  ----TTAGCATTT---CATAATAATTTTA-TGA-TTAATG--ATAG-AAT  84

seq1  AAGGTAAACTCAGTGTTCCATGGTGCAGTCTTGGAAAATTGCCTAAGATG  149
      ||||| ||||||| ||| ||| |||||||||    |||||||   |||||
seq2  AAGGT-AACTCAGGGTT-CAT-GTGCAGTCT---GAAATTGC--TAGATG  126

seq1  CTTAGTAAGAAAATCTAGCAATCAAACACTTCTCCTGTCCCCAAATTTTA  199
      ||||||||| ||||||||| |||||   | ||||||||||||||  ||||
seq2  CTTAGTAAG-AAATCTAGC-ATCAA--CCCTCTCCTGTCCCCAA--TTTA  170

seq1  TGGTGGCAGGTTGATATGGTTATAATAGACTTGACAGGTTTCATGCATGT  249
      ||   ||||| |||||| |||||||||||||||||| |||||||||||||
seq2  TG--TGCAGG-TGATATTGTTATAATAGACTTGACA-GTTTCATGCATGT  216

seq1  CATGCTGTTAATAGCTAAAAGCTAGTCCACATGGGAAAGATTTATTT-CC  298
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  CATGCTG-TAATAGCTAAAAGCTAGTCCACATGGGAAAGATTTATTTCCC  265

seq1  ACTAATATTTTCTTTTAGGCATTTGACATTGTCACAGACTGACATGGCTG  348
      ||||||||||||||||||||| |||||| |||||||||||||||||||||
seq2  ACTAATATTTTCTTTTAGGCA-TTGACA-TGTCACAGACTGACATGGCTG  313

seq1  CATTAACAGGAGGAAAGGTAATACCTTTACTAAGATTAAACAATTCAGTC  398
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  CATTAACAGGAGGAAAGGT-ATACCTTTACT-AGATTAAACAATTCAGTC  361

seq1  ATTCTAAAAATGATATAGTAGTTCTCAAACGAACAACTTGTGTTTTTAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAAATGATATAGTAGTTCTCAAACGAACAACTTGTGTTTTTAAC  411

seq1  AGGGATTTCCCTTCTTATTTCAACACATTCGTGATGGCATCAATATAAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTCCCTTCTTATTTCAACACATTCGTGATGGCATCAATATAAGA  461

seq1  CAAACTTGTAATCTAATTTTTAGCCTGTGTCGGTACAACAATCGACTTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGTAATCTAATTTTTAGCCTGTGTCGGTACAACAATCGACTTGC  511

seq1  AGAACATGTAAGTACTGAAAGGAGTCTTCAACTTTTTTAAATGTTTTAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGTAAGTACTGAAAGGAGTCTTCAACTTTTTTAAATGTTTTAAA  561

seq1  AATAGTATTCTAAAATCCTACTTTTTCTGTTTCAGATTGTATCTATGCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTCTAAAATCCTACTTTTTCTGTTTCAGATTGTATCTATGCTT  611

seq1  TTCACTTCAATAGCAAAGTTGACACCTGAGGTATGTAAGGGTTTGCTAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCAATAGCAAAGTTGACACCTGAGGTATGTAAGGGTTTGCTAAT  661

seq1  AGGTATATAATTTTAACTAACAGTTAATTCTCCCTTTATTGCAAATATAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATAATTTTAACTAACAGTTAATTCTCCCTTTATTGCAAATATAG  711

seq1  TTTTCCAACTTAATATGAATACATACATATAAATTCTATATATCAGAGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAACTTAATATGAATACATACATATAAATTCTATATATCAGAGTG  761

seq1  CTACTTCTATACCATACTTCAGTGTTTACAGCATGTATCATAAACTCTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTATACCATACTTCAGTGTTTACAGCATGTATCATAAACTCTCC  811

seq1  AGAGTTTGGTGTATTTGGAGTGGTAATGGAAGGTGGAGCACAGTGTCATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGGTGTATTTGGAGTGGTAATGGAAGGTGGAGCACAGTGTCATG  861

seq1  CATGTCTGATTTAGGTAGAAACCATTTCACAATCCCAGGATTCAGGAGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGATTTAGGTAGAAACCATTTCACAATCCCAGGATTCAGGAGGC  911

seq1  AGACAAAGGCCAGTCTGGTTTACATAGTGAATTTCAGGAGAGCCGGGGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGGCCAGTCTGGTTTACATAGTGAATTTCAGGAGAGCCGGGGCT  961

seq1  ATGTAGAGAGACACTATCTTATCCTCCATGCCAAAGAAAGAAAAGGTCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGAGACACTATCTTATCCTCCATGCCAAAGAAAGAAAAGGTCAT  1011

seq1  TTTTCATAAAACAGAAGCATCTTTAGTACATTTTTAAAAAATCAAAGTAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAAAACAGAAGCATCTTTAGTACATTTTTAAAAAATCAAAGTAA  1061

seq1  GTGATTTGGGGGTTCAGAGATTGCAAAAGAAATAATACAAAGTTTTCAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGGGGGTTCAGAGATTGCAAAAGAAATAATACAAAGTTTTCAAT  1111

seq1  AGAACATACTTGTTTTATTGCCATAATTTACTGAATTTTTTCTATTAGAC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATACTTGTTTTATTGCCATAATTTACTGAATTTTTTCTATTAGAC  1161

seq1  AGGAAAAATGAATTC  1213
      |||||||||||||||
seq2  AGGAAAAATGAATTC  1176

seq1: chr11_23215544_23216253
seq2: B6Ng01-010G16.g_64_773

seq1  GAATTCCAGTTGATAGGCTTGGTGGTAATCATTTTAATCATTTAATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTGATAGGCTTGGTGGTAATCATTTTAATCATTTAATTAAT  50

seq1  TTTAAATTAATCTTGCTGGCTTAAAGATTGCTCAATATGTTGCCTTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTAATCTTGCTGGCTTAAAGATTGCTCAATATGTTGCCTTGGCT  100

seq1  AGTTGGAACTGTATTTGTAGACCAGGCTAGCCCCAAACTTAATTCTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAACTGTATTTGTAGACCAGGCTAGCCCCAAACTTAATTCTCTGC  150

seq1  CTCCCAAGTATGTTAGCATGTGTGGTTAGGTTGCTGATCTTTAAACTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTATGTTAGCATGTGTGGTTAGGTTGCTGATCTTTAAACTATA  200

seq1  GTTCTAGTGCTATGAACGCTAGTCGTAAAGTTTCATGTATTTCTATGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGTGCTATGAACGCTAGTCGTAAAGTTTCATGTATTTCTATGTGC  250

seq1  TATTTGAAGAGTTTTAAATTTTTATTTTAATTTTTGAAGCCTTTATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAGAGTTTTAAATTTTTATTTTAATTTTTGAAGCCTTTATTTAT  300

seq1  TTGAATCAAGGTCTCCTGTAACCCAGGCTAGTCTCAAACTTGATATGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAAGGTCTCCTGTAACCCAGGCTAGTCTCAAACTTGATATGTAC  350

seq1  CTGAGGAGGACCTTGAACTTCCTTGAAGCTAGTTAAAGGTTTATAGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGGACCTTGAACTTCCTTGAAGCTAGTTAAAGGTTTATAGTAAA  400

seq1  TTAAACACCTTCACTGTGGAAAGAATGGTTTCAGCAGTCCTAGGTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACCTTCACTGTGGAAAGAATGGTTTCAGCAGTCCTAGGTAAATA  450

seq1  CTGAGTTTTTCTCTTTGGAAGTAAATAAAAGTTTATTCATTTTTCAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTTTCTCTTTGGAAGTAAATAAAAGTTTATTCATTTTTCAAAGA  500

seq1  TGATGTATATGTGTATGTTTATGTTACTCTGTGTTTTATATTATTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATATGTGTATGTTTATGTTACTCTGTGTTTTATATTATTTTTGT  550

seq1  TTTAGAGACTGCTATTAGCTACCTTAGGCAGCTTCAAATTTCCATGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGACTGCTATTAGCTACCTTAGGCAGCTTCAAATTTCCATGGCAG  600

seq1  TCTCCCTGATTCTGTGTGCTGGACTTCATAGGCATGAATTGCTAGGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGATTCTGTGTGCTGGACTTCATAGGCATGAATTGCTAGGTCTG  650

seq1  GTTTTATTAGCATTTGTTCAGAAAGAGAAAGCTAGGAGTGGTGATGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTAGCATTTGTTCAGAAAGAGAAAGCTAGGAGTGGTGATGGTGT  700

seq1  AGGTAGGTTT  710
      ||||||||||
seq2  AGGTAGGTTT  710