BAC Information

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BAC

Clone NameB6Ng01-011L08
Chromosome11 (Build37)
Map Location 110,937,509 - 110,938,630
singlet/doubletsinglet
Overlap genenone
Upstream geneAbca8a, Abca9, Abca6, Abca5, Map2k6, LOC100041523, Kcnj16, Kcnj2
Downstream geneLOC667003, LOC100041539, LOC100041559, EG629966, LOC629967, LOC100041589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011L08.bB6Ng01-011L08.g
ACCDH847017DH847018
length1,1291,208
definitionDH847017|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L08, 5' end.DH847018|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattttgattattgagaaaggaatagttttctatccctctaaga
gtatacttgaatcagacatttttagaatgtcatagagcactgtagtcatt
tctaaatccctagagaagtttgtttgactctgttcctgttctgttaatgc
atttttcctttgctttcactccctctctccctatatatccccttcctaaa
tcttgatgtgtctctgatgaccttggttccccaatgatgttccccttgca
gataacaaacgtcagcttttaacttataaccagccaccccataaaagcga
aaagctcatctcgaggggtgggttaagctccttatcaccctgttcaatga
tgttaaggtggaaagtataaaagtgttgcattattgcatcccctcccaca
accttcagcaaactagagtttctttcctagaaatgttaggtttcagctct
gggctctggcgagttgaatgatcctagcctttgacaatcatgatagttat
tattttcccatttgccatctgttttgtatctaaagtcttcctattgtact
gcacaaaccatgggttgtatatattttttatatattatgtcttattttat
tatttctaaataaaaattgaaaataaatgactttgtggaagtgtcattgg
acctctggtttgatctccatagaaacatgcatgttctcggacaatgggac
attaactctgaccatttgaatgaatagagccatagaaactgactgaacac
acaggtccaggggactggcagattagtttaatccaagttagaggaaatca
agcttatattttggtttggagcagaacagcttagaggatgggaaagaggg
aacaaaccaaagctaacaaaaagagttatatttcgattgctaaattacaa
tgattatattttgttgatttttgaatataagtagattctgccttgcataa
ttacttgtattttctttccttcttttaaaaaataattaaggttgtgtctc
aggcagctaagagtgggcctctgatcttagctatgtagccaaagatgacc
ttgaactttttgatttcctccttctatcctggtgatgagattccaggagt
gagccagggtcctgggtttatttgagtgt
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggtgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccctgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatttacaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttga
ataatagacctaagctctgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggtt
atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct
gaaggacagcaagggaaattcatacctttatgtgctctcactcccggtta
acctctggggaagggatattatgcagcatttgggccttattttgtccaat
gaaaacgccccatcgggagggtattcagctaaggcaaaaatatcatggct
aagatgggttataaagaaggaaaagggttaggacattaagatcagggaaa
gatagagctcatctcacctaatggaaaccagacaaacaaggtctgggttt
ttcctaacggtctattggggcagcaccgacctcataccatggaaaacagg
aactcaatgttgtgtttcctccatggcatcttatccttctgaaaactaga
agctgtgatcaactgtgataagtgaacaataaatttaggcatatgaaacc
ttctatcctaacctggatatcctcaattttggactggaagaaaggtcgga
aaggggcaacggctcctgagactccaagaccgattacgaggcaagtgcac
gtatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_110937509_110938630
seq2: B6Ng01-011L08.b_46_1174

seq1  GAATTCTATTTTGATTATTGAGAAAGGAATAGTTTTCTATCCCTCTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTTGATTATTGAGAAAGGAATAGTTTTCTATCCCTCTAAGA  50

seq1  GTATACTTGAATCAGACATTTTTAGAATGTCATAGAGCACTGTAGTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTTGAATCAGACATTTTTAGAATGTCATAGAGCACTGTAGTCATT  100

seq1  TCTAAATCCCTAGAGAAGTTTGTTTGACTCTGTTCCTGTTCTGTTAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCCCTAGAGAAGTTTGTTTGACTCTGTTCCTGTTCTGTTAATGC  150

seq1  ATTTTTCCTTTGCTTTCACTCCCTCTCTCCCTATATATCCCCTTCCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCTTTGCTTTCACTCCCTCTCTCCCTATATATCCCCTTCCTAAA  200

seq1  TCTTGATGTGTCTCTGATGACCTTGGTTCCCCAATGATGTTCCCCTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATGTGTCTCTGATGACCTTGGTTCCCCAATGATGTTCCCCTTGCA  250

seq1  GATAACAAACGTCAGCTTTTAACTTATAACCAGCCACCCCATAAAAGCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAAACGTCAGCTTTTAACTTATAACCAGCCACCCCATAAAAGCGA  300

seq1  AAAGCTCATCTCGAGGGGTGGGTTAAGCTCCTTATCACCCTGTTCAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCATCTCGAGGGGTGGGTTAAGCTCCTTATCACCCTGTTCAATGA  350

seq1  TGTTAAGGTGGAAAGTATAAAAGTGTTGCATTATTGCATCCCCTCCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGGTGGAAAGTATAAAAGTGTTGCATTATTGCATCCCCTCCCACA  400

seq1  ACCTTCAGCAAACTAGAGTTTCTTTCCTAGAAATGTTAGGTTTCAGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGCAAACTAGAGTTTCTTTCCTAGAAATGTTAGGTTTCAGCTCT  450

seq1  GGGCTCTGGCGAGTTGAATGATCCTAGCCTTTGACAATCATGATAGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTGGCGAGTTGAATGATCCTAGCCTTTGACAATCATGATAGTTAT  500

seq1  TATTTTCCCATTTGCCATCTGTTTTGTATCTAAAGTCTTCCTATTGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCCATTTGCCATCTGTTTTGTATCTAAAGTCTTCCTATTGTACT  550

seq1  GCACAAACCATGGGTTGTATATATTTTTTATATATTATGTCTTATTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAACCATGGGTTGTATATATTTTTTATATATTATGTCTTATTTTAT  600

seq1  TATTTCTAAATAAAAATTGAAAATAAATGACTTTGTGGAAGTGTCATTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAAATAAAAATTGAAAATAAATGACTTTGTGGAAGTGTCATTGG  650

seq1  ACCTCTGGTTTGATCTCCATAGAAACATGCATGTTCTCGGACAATGGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGGTTTGATCTCCATAGAAACATGCATGTTCTCGGACAATGGGAC  700

seq1  ATTAACTCTGACCATTTGAATGAATAGAGCCATAGAAACTGACTGAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTCTGACCATTTGAATGAATAGAGCCATAGAAACTGACTGAACAC  750

seq1  ACAGGTCCAGGGGACTGGCAGATTAGTTTAATCCAAGTTAGAGGAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCCAGGGGACTGGCAGATTAGTTTAATCCAAGTTAGAGGAAATCA  800

seq1  AGCTTATATTTTGGTTTGGAGCAGAACAGCTTAGAGGATGGGAAAGAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATATTTTGGTTTGGAGCAGAACAGCTTAGAGGATGGGAAAGAGGG  850

seq1  AACAAACCAAAGCTAACAAAAAGAGTTATATTTCGATTGCTAAATTACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCAAAGCTAACAAAAAGAGTTATATTTCGATTGCTAAATTACAA  900

seq1  TGATTATATTTTGTTGATTTTTGAATATAAGTAGATTCTGCCTTGCAT-A  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGATTATATTTTGTTGATTTTTGAATATAAGTAGATTCTGCCTTGCATAA  950

seq1  TTACTTGTATTTTCTTTCCTTCTTTTAAAAAATAATTAAGGTTGTGTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTATTTTCTTTCCTTCTTTTAAAAAATAATTAAGGTTGTGTCTC  1000

seq1  ATGCAGCTAAGAGT-GGCCTCTGA-CTTAGCTATGTAGCCAAAGATGACC  1047
      | |||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  AGGCAGCTAAGAGTGGGCCTCTGATCTTAGCTATGTAGCCAAAGATGACC  1050

seq1  TTGAACTTTTGATTTTCCTCCTTCTATCCTTGTGATGAGATTCCAGGAGT  1097
      ||||||||||   ||||||||||||||||| |||||||||||||||||||
seq2  TTGAACTTTTTGATTTCCTCCTTCTATCCTGGTGATGAGATTCCAGGAGT  1100

seq1  GAGCCA-GGTC--TGGTTTATTTG-GTGT  1122
      |||||| ||||   |||||||||| ||||
seq2  GAGCCAGGGTCCTGGGTTTATTTGAGTGT  1129