BAC Information

Click to search

BAC

Clone NameB6Ng01-012P02
Chromosome11 (Build37)
Map Location 37,689,894 - 37,790,351
singlet/doubletdoublet
Overlap genenone
Upstream geneOdz2, LOC100039148
Downstream geneLOC276941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012P02.bB6Ng01-012P02.g
ACCDH847889DH847890
length1,180657
definitionDH847889|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P02, 5' end.DH847890|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,789,182 - 37,790,351)(37,689,894 - 37,690,547)
sequence
gaattcttttgaaaaacactttaatgtgttcatcaaaagatactatcaga
gtcaaatggcattctacacaattggaggaatgcttacatctatcagttga
ggggtcaatggtgagacagttggatgaagtctggtggtttttgcaaggac
tgcagcaaagtcaactgaattaaaatcatcgaaggattcaaatagccacc
cctgccccccaaagaaatacccaaatagctacaaagtggagagaaagaga
ttacacattgttcatctttagtgagatgccagagacaagtgcagagaaat
atcacttcatccccgtgaaggttccaactatttaaaaaagacagaaaagt
acaacttttgtggagtattgagaactttgccaccttcacgccctgttagc
cttgtggtatagtctatggaaatgccattactcccttacaaatattaaaa
tgagaatatccatgtgttctagtgacatcacctatctgtgtatatgtcaa
gaagagctgaaagcagactgtcagatatctgtaggcccatgttcacagtt
accataaaagaaaaatgaaatcaacatgtgtctacaaacagatgagtgaa
gaaaatgtgtatatacacctggatgctgctcattcttagaagaaagattc
tgacatttgatgtattagaaagcattgaagataagtgtacaaagtgtctg
gatctactcttaggaggagccctgaagtgtccaaatattacagactgagc
gattgtgtctttgtctttgggctacaaagaacagctattactatataggt
atacagtttctgttttcagtatccagagaatttagtctctaggaagggca
aatgtgtatcagtatggggtgccactgaactgcacacttataaattgtta
caatagtacattgtaattcacacatattttcctatactaaaaatagcaaa
atagaagagaaatatgtatactagccactcttttatatgaaacgtggagt
cactggaggaagcagggggcctgctttatttcatggcagcagacagcttc
attattggccaatagatcttccaacttttttcttaagtctataagatctg
ttacatgaaatagagccagttgcaagcataagaatgggaacttatactgc
cttctttcgatgtccctcaaatacatactt
gaattcacttggacagtcgttctaatcacctccagcctcccatagactct
gctatttgttgtaacattaagattcttctgctataagccaaagaaaccca
ccctttctaggttgagatgtaaattcttattaggaaaaaaaataaagaat
aaagaatgcagcaaagaaattaggaatagggaggaagggactggagctca
gagcatcttcatgttagactctagagcaatgtctttcctggtcttccagg
gaactagatggactcaaaccttttttgtgtttgagttgcttttctcaagc
agatatttgtaggataaagtacaactggcctttgagaggtcatatgacag
ctcttagaacacagaaggaaagcctctctgagacaacatcaaaggggaga
ccttcaattattctgttgtgaagaaaaaacttatttaagttgaatgcagg
tatgaggctgaggagactcgaagtgcattggggagaggttctggtcatta
aatattagggatttaaaatatttcaatgaaaacttataattgagggtggg
ataaacatttgacagaacagggcatttcacttaaagattgttatacttac
atttcactggaagatattaaattattgtgttgggaagataaataggtttt
ccagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_37789182_37790351
seq2: B6Ng01-012P02.b_49_1228 (reverse)

seq1  AAGTATG-ATTTGAGGCA-AACAGAAGAA-GCAGTATATGTTCCTA-TCT  46
      ||||||| |||||||| | | |  ||||| |||||||| ||||| | |||
seq2  AAGTATGTATTTGAGGGACATCGAAAGAAGGCAGTATAAGTTCCCATTCT  50

seq1  TATGCTTGCAACTGGCTCTA-TTCATGTTAACAGATTCTTTATAGA-TTA  94
      |||||||||||||||||||| |||||| ||||||||   ||||||| |||
seq2  TATGCTTGCAACTGGCTCTATTTCATG-TAACAGAT--CTTATAGACTTA  97

seq1  AAGAAAAAGTT-GAAGATCTATTGG-CAATAATTGGAGCTGTCCTGCTG-  141
      |  |||||||| ||||||||||||| |||||| || |||||| |||||| 
seq2  AGAAAAAAGTTGGAAGATCTATTGGCCAATAA-TGAAGCTGT-CTGCTGC  145

seq1  CATGAAAT-AAGCAGGCCCCTTGCTTCCT-CAGTGACT-CACGTTTCATA  188
      |||||||| ||||||||||| |||||||| |||||||| |||||||||||
seq2  CATGAAATAAAGCAGGCCCCCTGCTTCCTCCAGTGACTCCACGTTTCATA  195

seq1  T-AAAGAGT-GCTAGTATACATATTTCTCTTCTATTTTGCTATTTTTAGT  236
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGTGGCTAGTATACATATTTCTCTTCTATTTTGCTATTTTTAGT  245

seq1  ATAGGAAAATATGTGTGAATTACAATGTACTATTGTAACAATTTATAAGT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAATATGTGTGAATTACAATGTACTATTGTAACAATTTATAAGT  295

seq1  GTGCAGTTCAGTGGCA-CCCATACTGATACACATTTGCCCTTCCTAGAGA  335
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGCAGTTCAGTGGCACCCCATACTGATACACATTTGCCCTTCCTAGAGA  345

seq1  CTGAATTCTCTGGATACTGAAAACAGAAACTGTATACCTATATAGTAATA  385
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCTCTGGATACTGAAAACAGAAACTGTATACCTATATAGTAATA  395

seq1  GCTGTTCTTTGTAGCCCAAAGACAAAGACACAATCGCTCAGTCTGTAATA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTTTGTAGCCCAAAGACAAAGACACAATCGCTCAGTCTGTAATA  445

seq1  TTTGGACACTTCAGGGCTCCTCCTAAGAGTAGATCCAGACACTTTGTACA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACACTTCAGGGCTCCTCCTAAGAGTAGATCCAGACACTTTGTACA  495

seq1  CTTATCTTCAATGCTTTCTAATACATCAAATGTCAGAATCTTTCTTCTAA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTTCAATGCTTTCTAATACATCAAATGTCAGAATCTTTCTTCTAA  545

seq1  GAATGAGCAGCATCCAGGTGTATATACACATTTTCTTCACTCATCTGTTT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGCAGCATCCAGGTGTATATACACATTTTCTTCACTCATCTGTTT  595

seq1  GTAGACACATGTTGATTTCATTTTTCTTTTATGGTAACTGTGAACATGGG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACACATGTTGATTTCATTTTTCTTTTATGGTAACTGTGAACATGGG  645

seq1  CCTACAGATATCTGACAGTCTGCTTTCAGCTCTTCTTGACATATACACAG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGATATCTGACAGTCTGCTTTCAGCTCTTCTTGACATATACACAG  695

seq1  ATAGGTGATGTCACTAGAACACATGGATATTCTCATTTTAATATTTGTAA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGATGTCACTAGAACACATGGATATTCTCATTTTAATATTTGTAA  745

seq1  GGGAGTAATGGCATTTCCATAGACTATACCACAAGGCTAACAGGGCGTGA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTAATGGCATTTCCATAGACTATACCACAAGGCTAACAGGGCGTGA  795

seq1  AGGTGGCAAAGTTCTCAATACTCCACAAAAGTTGTACTTTTCTGTCTTTT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCAAAGTTCTCAATACTCCACAAAAGTTGTACTTTTCTGTCTTTT  845

seq1  TTAAATAGTTGGAACCTTCACGGGGATGAAGTGATATTTCTCTGCACTTG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGTTGGAACCTTCACGGGGATGAAGTGATATTTCTCTGCACTTG  895

seq1  TCTCTGGCATCTCACTAAAGATGAACAATGTGTAATCTCTTTCTCTCCAC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCATCTCACTAAAGATGAACAATGTGTAATCTCTTTCTCTCCAC  945

seq1  TTTGTAGCTATTTGGGTATTTCTTTGGGGGGCAGGGGTGGCTATTTGAAT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCTATTTGGGTATTTCTTTGGGGGGCAGGGGTGGCTATTTGAAT  995

seq1  CCTTCGATGATTTTAATTCAGTTGACTTTGCTGCAGTCCTTGCAAAAACC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGATGATTTTAATTCAGTTGACTTTGCTGCAGTCCTTGCAAAAACC  1045

seq1  ACCAGACTTCATCCAACTGTCTCACCATTGACCCCTCAACTGATAGATGT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTTCATCCAACTGTCTCACCATTGACCCCTCAACTGATAGATGT  1095

seq1  AAGCATTCCTCCAATTGTGTAGAATGCCATTTGACTCTGATAGTATCTTT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTCCTCCAATTGTGTAGAATGCCATTTGACTCTGATAGTATCTTT  1145

seq1  TGATGAACACATTAAAGTGTTTTTCAAAAGAATTC  1170
      |||||||||||||||||||||||||||||||||||
seq2  TGATGAACACATTAAAGTGTTTTTCAAAAGAATTC  1180

seq1: chr11_37689894_37690547
seq2: B6Ng01-012P02.g_64_719

seq1  GAATTCACTTGGACAGTCGTTCTAATCACCTCCAGCCTCCCATAGACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGACAGTCGTTCTAATCACCTCCAGCCTCCCATAGACTCT  50

seq1  GCTATTTGTTGTAACATTAAGATTCTTCTGCTATAAGCCAAAGAAACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGTTGTAACATTAAGATTCTTCTGCTATAAGCCAAAGAAACCCA  100

seq1  CCCTTTCTAGGTTGAGATGTAAATTCTTATTAGGAAAAAAAATAAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTAGGTTGAGATGTAAATTCTTATTAGGAAAAAAAATAAAGAAT  150

seq1  AAAGAATGCAGCAAAGAAATTAGGAATAGGGAGGAAGGGACTGGAGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGCAGCAAAGAAATTAGGAATAGGGAGGAAGGGACTGGAGCTCA  200

seq1  GAGCATCTTCATGTTAGACTCTAGAGCAATGTCTTTCCTGGTCTTCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTTCATGTTAGACTCTAGAGCAATGTCTTTCCTGGTCTTCCAGG  250

seq1  GAACTAGATGGACTCAAACCTTTTTTGTGTTTGAGTTGCTTTTCTCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGATGGACTCAAACCTTTTTTGTGTTTGAGTTGCTTTTCTCAAGC  300

seq1  AGATATTTGTAGGATAAAGTACAACTGGCCTTTGAGAGGTCATATGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGTAGGATAAAGTACAACTGGCCTTTGAGAGGTCATATGACAG  350

seq1  CTCTTAGAACACAGAAGGAAAGCCTCTCTGAGACAACATCAAAGGGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGAACACAGAAGGAAAGCCTCTCTGAGACAACATCAAAGGGGAGA  400

seq1  CCTTCAATTATTCTGTTGTGAAGAAAAAACTTATTTAAGTTGAATGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATTATTCTGTTGTGAAGAAAAAACTTATTTAAGTTGAATGCAGG  450

seq1  TATGAGGCTGAGGAGACTCGAAGTGCATTGGGGAGAGGTTCTGGTCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGCTGAGGAGACTCGAAGTGCATTGGGGAGAGGTTCTGGTCATTA  500

seq1  AATATTAGGGATTTAAAATATTTCAATGAAAACTTATAATTGAGGGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGGGATTTAAAATATTTCAATGAAAACTTATAATTGAGGGTGGG  550

seq1  ATAAACATTTGACAGAACAGGGCATTTCACTTAAAGATTGTTATAC-TAC  599
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAACATTTGACAGAACAGGGCATTTCACTTAAAGATTGTTATACTTAC  600

seq1  A-TTCACTGGAAGATATTAAATTATTGTGCTGGGAAGATAAAAAGGTTCT  648
      | ||||||||||||||||||||||||||| |||||||||||| ||||| |
seq2  ATTTCACTGGAAGATATTAAATTATTGTGTTGGGAAGATAAATAGGTTTT  650

seq1  CCAGTG  654
      ||||||
seq2  CCAGTG  656