BAC Information

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BAC

Clone NameB6Ng01-013A13
Chromosome11 (Build37)
Map Location 39,180,300 - 39,181,425
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013A13.bB6Ng01-013A13.g
ACCDH847957DH847958
length1,113455
definitionDH847957|Mus musculus domesticus DNA, BAC clone: B6Ng01-013A13, 5' end.DH847958|Mus musculus domesticus DNA, BAC clone: B6Ng01-013A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaataatcaataaaaatattaagtaaagaaataatagaaatt
aataatgaagaactgggccaatctcagtgcattacaaacgtttttcttaa
aactatcataaagaaaagaagaaatgtgtttgaactggattgtaaaatat
agaacctcccagacactacaaaggaatcaacattcatttaactgtagacc
tgattcacaaatcaccccaagacctgaaatctgcatgcaatctcaaaacc
ataccagtgtgacactgtttactactcaaatgatttgtagtacaccagca
ttttgtagaaatgtgcaccttatttcaagtgtgatgtgtaaaaaggcctg
cgtcaaaacattttcaaaataactatatttctaccttgttgaaaaattga
agctagcaaatgccagttaagtttttgttttgtttttctttttcgtatac
ataatgccttatgccacccaaggttggaaaaagctttaagaaatacatgt
tatattctctccaagactcatgtgcgaatttcctttctagattcgggtgg
gccaggtgaaaagttttcttcttagtaaatgcactcccttacctaatcct
tccagatggctgaagccattaaatacattatcccgtggtttactgtagag
gtactagtgcccatctgaaacagtacccagggggtttgatttttctcttc
atttgagtttttacttccatccaagtaattacattttcatttgacaaagc
tctgtgaaaacaatcgtaccctctacgatgacctcaggagtatctcttac
ctctacaaccctcagacgctgactgagtgagctaatggacattttagttg
acaaagattgttgaaacattttattcctggactgtcctcaggattctgct
ttttccttcctttctcaaaataaaccattcccattgtcattttctcctgt
tctttctatctaccatcagattttatcaccctcacatactcagtataata
tagtctctgatttctgtcggggacatactcttggaatgaaatttcttctc
atcattcagtgaaacattgtcctatgaatctttggattcaacttaagtat
gatccagcatttt

acaatggcctagctaataggtgggttaaccatgtaagagttagggaatcc
cactgagacagggatcttctctacatccaaggtatggcaggctacattgc
atattggaagcaagttggtgaattcttctgacaaatggagattctccaca
gacacttaaaagaacaggcaagttacagtcatacaagaatttatcagggt
ctagaaaatagggggggggttgtggtattgcattattcatgagaaggtct
gctagggcagaacaccctggtgctagctttcacaaggctcaaaggagtag
cacaaattgtgactagggtgtgaaattcttacctgtcattaagctgaccc
tagagcagcactgctttatctttactataaacatttacctggttcctgta
agtccttttgaagtcattccttttgttttgtgtcaggtaacttcaatgta
ctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_39180300_39181425
seq2: B6Ng01-013A13.b_43_1155 (reverse)

seq1  AAAATGCTTGGATCATACATTAAGTTTGAATTCAAAAGATTTCATAGGAC  50
      ||||||| |||||||||| ||||| ||||| || ||||| ||||||||||
seq2  AAAATGC-TGGATCATAC-TTAAG-TTGAA-TCCAAAGA-TTCATAGGAC  45

seq1  AATTGTTTTCACTTGAATGATAGAGAAGAAAATTTCATTTCAAGAGTTAT  100
      |||   |||||| |||||||| |||||| |||||||||| |||||| |||
seq2  AAT--GTTTCAC-TGAATGAT-GAGAAG-AAATTTCATTCCAAGAG-TAT  89

seq1  GTCACCGACAGGAAATCAGAGACTATATTATACTGAGTATGTGAGGGTGA  150
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCGACA-GAAATCAGAGACTATATTATACTGAGTATGTGAGGGTGA  138

seq1  TAAAATCTGATGGTAGATAGAAAGAACAGGAAGAAAATGACAATGGGAAT  200
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAAAATCTGATGGTAGATAGAAAGAACAGG-AGAAAATGACAATGGGAAT  187

seq1  GGTTTATTTTGAGAAAGGAAGGAAAAAGCAGAATCCTGAGGACAGTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATTTTGAGAAAGGAAGGAAAAAGCAGAATCCTGAGGACAGTCCAG  237

seq1  GAATAAAATGTTTCAACAATCTTTGTCAACTAAAATGTCCATTAGCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATGTTTCAACAATCTTTGTCAACTAAAATGTCCATTAGCTCAC  287

seq1  TCAGTCAGCGTCTGAGGGTTGTAGAGGTAAGAGATACTCCTGAGGTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAGCGTCTGAGGGTTGTAGAGGTAAGAGATACTCCTGAGGTCATC  337

seq1  GTAGAGGGTACGATTGTTTTCACAGAGCTTTGTCAAATGAAAATGTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGGTACGATTGTTTTCACAGAGCTTTGTCAAATGAAAATGTAATT  387

seq1  ACTTGGATGGAAGTAAAAACTCAAATGAAGAGAAAAATCAAACCCCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATGGAAGTAAAAACTCAAATGAAGAGAAAAATCAAACCCCCTGG  437

seq1  GTACTGTTTCAGATGGGCACTAGTACCTCTACAGTAAACCACGGGATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTTTCAGATGGGCACTAGTACCTCTACAGTAAACCACGGGATAAT  487

seq1  GTATTTAATGGCTTCAGCCATCTGGAAGGATTAGGTAAGGGAGTGCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAATGGCTTCAGCCATCTGGAAGGATTAGGTAAGGGAGTGCATTT  537

seq1  ACTAAGAAGAAAACTTTTCACCTGGCCCACCCGAATCTAGAAAGGAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAAGAAAACTTTTCACCTGGCCCACCCGAATCTAGAAAGGAAATT  587

seq1  CGCACATGAGTCTTGGAGAGAATATAACATGTATTTCTTAAAGCTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACATGAGTCTTGGAGAGAATATAACATGTATTTCTTAAAGCTTTTTC  637

seq1  CAACCTTGGGTGGCATAAGGCATTATGTATACGAAAAAGAAAAACAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTGGGTGGCATAAGGCATTATGTATACGAAAAAGAAAAACAAAAC  687

seq1  AAAAACTTAACTGGCATTTGCTAGCTTCAATTTTTCAACAAGGTAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTAACTGGCATTTGCTAGCTTCAATTTTTCAACAAGGTAGAAAT  737

seq1  ATAGTTATTTTGAAAATGTTTTGACGCAGGCCTTTTTACACATCACACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTATTTTGAAAATGTTTTGACGCAGGCCTTTTTACACATCACACTT  787

seq1  GAAATAAGGTGCACATTTCTACAAAATGCTGGTGTACTACAAATCATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGGTGCACATTTCTACAAAATGCTGGTGTACTACAAATCATTTG  837

seq1  AGTAGTAAACAGTGTCACACTGGTATGGTTTTGAGATTGCATGCAGATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAAACAGTGTCACACTGGTATGGTTTTGAGATTGCATGCAGATTT  887

seq1  CAGGTCTTGGGGTGATTTGTGAATCAGGTCTACAGTTAAATGAATGTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTTGGGGTGATTTGTGAATCAGGTCTACAGTTAAATGAATGTTGA  937

seq1  TTCCTTTGTAGTGTCTGGGAGGTTCTATATTTTACAATCCAGTTCAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTAGTGTCTGGGAGGTTCTATATTTTACAATCCAGTTCAAACA  987

seq1  CATTTCTTCTTTTCTTTATGATAGTTTTAAGAAAAACGTTTGTAATGCAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCTTTTCTTTATGATAGTTTTAAGAAAAACGTTTGTAATGCAC  1037

seq1  TGAGATTGGCCCAGTTCTTCATTATTAATTTCTATTATTTCTTTACTTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTGGCCCAGTTCTTCATTATTAATTTCTATTATTTCTTTACTTAA  1087

seq1  TATTTTTATTGATTATTTGGGAATTC  1126
      ||||||||||||||||||||||||||
seq2  TATTTTTATTGATTATTTGGGAATTC  1113


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