BAC Information

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BAC

Clone NameB6Ng01-015H02
Chromosome11 (Build37)
Map Location 86,023,757 - 86,153,350
singlet/doubletdoublet
Overlap geneInts2, Thrap1
Upstream geneAppbp2, D630032N06Rik, Ppm1d, Bcas3, Tbx2, Tbx4, LOC668751, Brip1, LOC668803
Downstream gene0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40, Ypel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015H02.bB6Ng01-015H02.g
ACCDH849700DH849701
length1,094590
definitionDH849700|Mus musculus domesticus DNA, BAC clone: B6Ng01-015H02, 5' end.DH849701|Mus musculus domesticus DNA, BAC clone: B6Ng01-015H02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,023,757 - 86,024,863)(86,152,761 - 86,153,350)
sequence
gaattcctcagttgacaagtttcagttgtaacactgaaaatttatagtct
ttagtctagtaatggggtacaagttctaatttatcagttcaatagattat
tcagtaaaatgatttttaaaaataagctgtttccaagaaaaaaatatgtc
ctgtgaaatttgttttataaaagcagactccaggatctgaagagggtgga
ccagtggttaagagcacttgcttctcttgtacaggacccaggttacattc
ctagcacccatatgggactcataaccatcggtaactacaatttctagggt
tcctttcatttatgtgaccttaaagaaagggatatattaaagccccagaa
ctagggtgtcctagattctaactccctcctggtaattttacattaacagt
tgtgaaataaaacataaaagctacagttcattgttaaagaatgaatgttt
ataaatcaatatccaaaatagttgcacacatctgttttgacttgaataaa
aaaaatcacattgtgacaaagcttataaccttaacttaagatatatgaat
attaacatttactaatattatttacatattttatttacatcatcaacaaa
ttggatgaaaaacaggctatgttattactttaacacagtaggttatgact
agtctttgaaaattgatccacaaaatgtgtactgtattttcattacaaaa
catactttcaaataattcagaattcctaaaggattctactattcacagga
aaaacttccagaaaggtctcatttacaaacaaaacgggagcagttgtatt
taatcttaagagacttcagaactgcctcattttaaaaataggaaaattct
tgtggtatatctttatagcatattctttactcttcacatcaaattaattt
atgaacatgagcatctataaaaagttatatatattccaccatgcatgatc
gatgtacttcatgatggaaacgctattaatcttgttaatgaacactttca
tagttaggtcatgatgacaagaataatgaaattgtgactatgtccgagag
gatggatgaagctactctgtgaggggggagctaaaactttcctt
gaattcatggaataaaattaatctgggaatttaagataactaggtttaaa
atattataaaaacacgtgtaacaaaattaatcatttttgccttttttcca
gtatttcagtggtattaaggaaattgacatggtggtacaattgacatctt
ctaccctttggtccctttgtttttatttttttccctcaaggtttgttttc
ttgttttctttctttctttctttccttccttcctctccctctccctctcc
ctctccctctccctcttccttccttccttccttttattagatatatttat
tttatttatatgagcacactgtagctattttcaggcacaccagaagaggg
cattggatcccattacagatggttgtgaactaccatgtggttgctgggaa
ttgaactcaggacatctggaagaccaagcagccagtgctcttaacccctg
agccatctatcgcctaacttttttgttttttaatgagtgttttaagcacc
tcatataagtgaaagtatatatttgttattttgtatctgacttatttcac
ttggcataccttcaagttttatccacattgtagcatgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_86023757_86024863
seq2: B6Ng01-015H02.b_44_1137

seq1  GAATTCCTCAGTTGACAAGTTTCAGTTGTAACACTGAAAATTTATAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTTGACAAGTTTCAGTTGTAACACTGAAAATTTATAGTCT  50

seq1  TTAGTCTAGTAATGGGGTACAAGTTCTAATTTATCAGTTCAATAGATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTAGTAATGGGGTACAAGTTCTAATTTATCAGTTCAATAGATTAT  100

seq1  TCAGTAAAATGATTTTTAAAAATAAGCTGTTTCCAAGAAAAAAATATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAATGATTTTTAAAAATAAGCTGTTTCCAAGAAAAAAATATGTC  150

seq1  CTGTGAAATTTGTTTTATAAAAGCAGACTCCAGGATCTGAAGAGGGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAATTTGTTTTATAAAAGCAGACTCCAGGATCTGAAGAGGGTGGA  200

seq1  CCAGTGGTTAAGAGCACTTGCTTCTCTTGTACAGGACCCAGGTTACATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGTTAAGAGCACTTGCTTCTCTTGTACAGGACCCAGGTTACATTC  250

seq1  CTAGCACCCATATGGGACTCATAACCATCGGTAACTACAATTTCTAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACCCATATGGGACTCATAACCATCGGTAACTACAATTTCTAGGGT  300

seq1  TCCTTTCATTTATGTGACCTTAAAGAAAGGGATATATTAAAGCCCCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATTTATGTGACCTTAAAGAAAGGGATATATTAAAGCCCCAGAA  350

seq1  CTAGGGTGTCCTAGATTCTAACTCCCTCCTGGTAATTTTACATTAACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTGTCCTAGATTCTAACTCCCTCCTGGTAATTTTACATTAACAGT  400

seq1  TGTGAAATAAAACATAAAAGCTACAGTTCATTGTTAAAGAATGAATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATAAAACATAAAAGCTACAGTTCATTGTTAAAGAATGAATGTTT  450

seq1  ATAAATCAATATCCAAAATAGTTGCACACATCTGTTTTGACTTGAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAATATCCAAAATAGTTGCACACATCTGTTTTGACTTGAATAAA  500

seq1  AAAAATCACATTGTGACAAAGCTTATAACCTTAACTTAAGATATATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCACATTGTGACAAAGCTTATAACCTTAACTTAAGATATATGAAT  550

seq1  ATTAACATTTACTAATATTATTTACATATTTTATTTACATCATCAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATTTACTAATATTATTTACATATTTTATTTACATCATCAACAAA  600

seq1  TTGGATGAAAAACAGGCTATGTTATTACTTTAACACAGTAGGTTATGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGAAAAACAGGCTATGTTATTACTTTAACACAGTAGGTTATGACT  650

seq1  AGTCTTTGAAAATTGATCCACAAAATGTGTACTGTA-TTTCATTACAAAA  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTCTTTGAAAATTGATCCACAAAATGTGTACTGTATTTTCATTACAAAA  700

seq1  CATAC-TTCAAATAATTCAGAATTCCTAAAGGATTCTACTATTCACA-GA  747
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATACTTTCAAATAATTCAGAATTCCTAAAGGATTCTACTATTCACAGGA  750

seq1  AAAACTTCCAGAAAGGTCTCATTTACAAACAAAACGGGAGCAGTTGTATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCCAGAAAGGTCTCATTTACAAACAAAACGGGAGCAGTTGTATT  800

seq1  TAATCTTAAGAGACTTCAGAACTGCCTCA-TTTAAAAATAGGAAAATTCT  846
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAATCTTAAGAGACTTCAGAACTGCCTCATTTTAAAAATAGGAAAATTCT  850

seq1  TGTGGTATATCTTTAAAGCATATTCTTTTACTCTTCACATCAAAATTAAT  896
      ||||||||||||||| ||||||||| ||||||||||||||| ||||||||
seq2  TGTGGTATATCTTTATAGCATATTC-TTTACTCTTCACATC-AAATTAAT  898

seq1  TAATTGAACATTAAGCATCTAATAAAAAGTTATATATATTCCACCATGCA  946
      | | |||||| | ||||||| |||||||||||||||||||||||||||||
seq2  TTA-TGAACA-TGAGCATCT-ATAAAAAGTTATATATATTCCACCATGCA  945

seq1  TGATACGATGTACTTCATGATTGGAAACAGCTA-TAAACTTGTTTTAATA  995
      |||| ||||||||||||||| ||||||| |||| ||| ||||  ||||| 
seq2  TGAT-CGATGTACTTCATGA-TGGAAAC-GCTATTAATCTTG--TTAAT-  989

seq1  GAACACCTTCATGAGGTAGGGTCAGGAGTGACAAAGAAAAATGAGA-TGT  1044
      |||||| ||||| || || ||||| || |||| ||||| ||||| | |||
seq2  GAACACTTTCAT-AGTTA-GGTCATGA-TGAC-AAGAATAATGAAATTGT  1035

seq1  GACTATGTACGAGAGGAAAGGATGAAGCTAAGTTCCTTTGTGGGGGGAGG  1094
      |||||||| ||||||| | |||||||||||     || || |||||||| 
seq2  GACTATGTCCGAGAGG-ATGGATGAAGCTA---CTCTGTGAGGGGGGAGC  1081

seq1  GATAACTTTCCTT  1107
       | ||||||||||
seq2  TAAAACTTTCCTT  1094

seq1: chr11_86152761_86153350
seq2: B6Ng01-015H02.g_65_654 (reverse)

seq1  CCACATGCTACAATGTGGATAAAACTTGAAGGTATGCCAAGTGAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCTACAATGTGGATAAAACTTGAAGGTATGCCAAGTGAAATAAG  50

seq1  TCAGATACAAAATAACAAATATATACTTTCACTTATATGAGGTGCTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATACAAAATAACAAATATATACTTTCACTTATATGAGGTGCTTAAA  100

seq1  ACACTCATTAAAAAACAAAAAAGTTAGGCGATAGATGGCTCAGGGGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATTAAAAAACAAAAAAGTTAGGCGATAGATGGCTCAGGGGTTAA  150

seq1  GAGCACTGGCTGCTTGGTCTTCCAGATGTCCTGAGTTCAATTCCCAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTGGCTGCTTGGTCTTCCAGATGTCCTGAGTTCAATTCCCAGCAA  200

seq1  CCACATGGTAGTTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGTAGTTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTG  250

seq1  GTGTGCCTGAAAATAGCTACAGTGTGCTCATATAAATAAAATAAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGAAAATAGCTACAGTGTGCTCATATAAATAAAATAAATATAT  300

seq1  CTAATAAAAGGAAGGAAGGAAGGAAGAGGGAGAGGGAGAGGGAGAGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAGGAAGGAAGGAAGGAAGAGGGAGAGGGAGAGGGAGAGGGAG  350

seq1  AGGGAGAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAACAAGAAAACAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAACAAGAAAACAAAC  400

seq1  CTTGAGGGAAAAAAATAAAAACAAAGGGACCAAAGGGTAGAAGATGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGGAAAAAAATAAAAACAAAGGGACCAAAGGGTAGAAGATGTCAA  450

seq1  TTGTACCACCATGTCAATTTCCTTAATACCACTGAAATACTGGAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCACCATGTCAATTTCCTTAATACCACTGAAATACTGGAAAAAAG  500

seq1  GCAAAAATGATTAATTTTGTTACACGTGTTTTTATAATATTTTAAACCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAATGATTAATTTTGTTACACGTGTTTTTATAATATTTTAAACCTA  550

seq1  GTTATCTTAAATTCCCAGATTAATTTTATTCCATGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTTAAATTCCCAGATTAATTTTATTCCATGAATTC  590