BAC Information

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BAC

Clone NameB6Ng01-015K22
Chromosome11 (Build37)
Map Location 27,248,604 - 27,249,669
singlet/doubletsinglet
Overlap genenone
Upstream geneFancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
Downstream geneLOC100042377, EG626571
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015K22.bB6Ng01-015K22.g
ACCDH849873DH849874
length1,0001,064
definitionDH849873|Mus musculus domesticus DNA, BAC clone: B6Ng01-015K22, 5' end.DH849874|Mus musculus domesticus DNA, BAC clone: B6Ng01-015K22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctgtccaatacttttaacatgaaggggtgttgtatttta
ctaaatgctttttcagcatctaagaagatgatcatgtgacttttttccct
ttgagtttgtttatatagtggattatgttgatggatttccttatattaaa
ccaaccttatatccctgggatgaagcctacttgattgtggtgaatcgtgg
ttttgatgtgttcttggattcagtttagaggaattttattaagaattttt
gcattgatattcataaggaagattggtctgaagttctctttttgggttgg
gcccttgggtggtttaggtatcagagtaattatggcttcatagaacaagt
taggtagtatttcttctgtttctattttatggaatagtttgaggaaaatt
ggtatcaggtcttctttgaaggattggtagaattttgcactaaattcatc
tggcttgggctgttattgtttgggaggtttttaatgatttcttatatttc
cttgtgtgatatgggcctgtttagatagtttatatgatcttgatttaact
ttggtatgtggcatctgtctagaaaacaatccattttatctaggtttttc
agtttcattgagtataggcttttataggaggatctaatgatttttttttt
taatttcctccatttctgttatgtctcacttttcatttctgattttttta
aataggatactgcctcttggccatgatggtctgatagggtgcatgggata
tttcagtcttcttgtatctgttgaaggttgttttgtgaccagttatatgg
tcaattttggagaaggtgccatgaggtgctgagaagaatgtgtattcttt
ttctttagggtgaaatgttctgtaggtatctgtcaaatccacttgggttc
ataacctttcttagttcactgtgtctctgtttagtttctgtttcaatgac
tgctgtagtgagagtggggtgcctgaagcctcccacctatattgggagag

gaattctgaacctcattcctgatcagtgaggggctgagattcaaagaaca
aaaagccagagttgttattttgtttgtttgtttgttttattgattattgt
tattattattattaattgttattaattttgattccctgatgttaaaagca
ggaattaattggcttttagcctcagaataacaagagagtgttacatttcc
acaagtcatcagcttctggctcccaaaacagtgagagagaattacaaagc
cagagatggcttttgtccaatattgtgtcctactcggcagtatcaagata
ttaaaacgttaatacttgatacttagatatataaattaaacataatatat
ttggttgtgacagttttagtgttatgataactttgaagacactttgctgt
tatcaacctatgaagcttgaaagtatttgatctgcctaatcttgttttgt
taactagttgggagttactacatagtgattggtgacatttagaaataaag
aactatggaccacctttaaaagggatgtaaggaaagaagaaattgagaaa
tgtggtttaaatccactctggtgataacacttgctgcattaatgatcagt
ctaagtactttatctccagttgaggacccagtcactttaaaatagaaaat
attggaggacttttcagttcacaagtctccaactgagactttgtaacctt
ggttctccacaggacaggggtaatacgtgtaaagcatgaggctgatgtag
gaaccatctggaagtaggcaaaatctaggagtggaacaatcatgggcata
gagtgataatctggcagatctttgaagaggggctatagaggcacaaaggt
atttgctgtcatgattttggagtgaggcagacatggggcacagaagtcaa
accagcacctcttgatatagtttggtgggaattaattatattcagttgga
gtggtctcaacagactgaaggctgagacagttttattgccagcaatcaga
cctttttaagtcttatcaaaaccatatattaattagaaagtgggtcagat
aaccaagacctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_27248604_27249669
seq2: B6Ng01-015K22.g_68_1131

seq1  GAATTCTGAACCTCATTCCTGATCAGTGAGGGGCTGAGATTCAAAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACCTCATTCCTGATCAGTGAGGGGCTGAGATTCAAAGAACA  50

seq1  AAAAGCCAGAGTTGTTATTTTGTTTGTTTGTTTGTTTTATTGATTATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAGAGTTGTTATTTTGTTTGTTTGTTTGTTTTATTGATTATTGT  100

seq1  TATTATTATTATTAATTGTTATTAATTTTGATTCCCTGATGTTAAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTAATTGTTATTAATTTTGATTCCCTGATGTTAAAAGCA  150

seq1  GGAATTAATTGGCTTTTAGCCTCAGAATAACAAGAGAGTGTTACATTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAATTGGCTTTTAGCCTCAGAATAACAAGAGAGTGTTACATTTCC  200

seq1  ACAAGTCATCAGCTTCTGGCTCCCAAAACAGTGAGAGAGAATTACAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCATCAGCTTCTGGCTCCCAAAACAGTGAGAGAGAATTACAAAGC  250

seq1  CAGAGATGGCTTTTGTCCAATATTGTGTCCTACTCGGCAGTATCAAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGGCTTTTGTCCAATATTGTGTCCTACTCGGCAGTATCAAGATA  300

seq1  TTAAAACGTTAATACTTGATACTTAGATATATAAATTAAACATAATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACGTTAATACTTGATACTTAGATATATAAATTAAACATAATATAT  350

seq1  TTGGTTGTGACAGTTTTAGTGTTATGATAACTTTGAAGACACTTTGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGTGACAGTTTTAGTGTTATGATAACTTTGAAGACACTTTGCTGT  400

seq1  TATCAACCTATGAAGCTTGAAAGTATTTGATCTGCCTAATCTTGTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACCTATGAAGCTTGAAAGTATTTGATCTGCCTAATCTTGTTTTGT  450

seq1  TAACTAGTTGGGAGTTACTACATAGTGATTGGTGACATTTAGAAATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGTTGGGAGTTACTACATAGTGATTGGTGACATTTAGAAATAAAG  500

seq1  AACTATGGACCACCTTTAAAAGGGATGTAAGGAAAGAAGAAATTGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGGACCACCTTTAAAAGGGATGTAAGGAAAGAAGAAATTGAGAAA  550

seq1  TGTGGTTTAAATCCACTCTGGTGATAACACTTGCTGCATTAATGATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTAAATCCACTCTGGTGATAACACTTGCTGCATTAATGATCAGT  600

seq1  CTAAGTACTTTATCTCCAGTTGAGGACCCAGTCACTTTAAAATAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTACTTTATCTCCAGTTGAGGACCCAGTCACTTTAAAATAGAAAAT  650

seq1  ATTGGAGGACTTTTCAGTTCACAAGTCTCCAACTGAGACTTTGTAACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGGACTTTTCAGTTCACAAGTCTCCAACTGAGACTTTGTAACCTT  700

seq1  GGTTCTCCACAGGACAGGGGTAATACGTGTAAAGCATGAGGCTGATGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCCACAGGACAGGGGTAATACGTGTAAAGCATGAGGCTGATGTAG  750

seq1  GAACCATCTGGAAGTAGGCAAAATCTAGGAGTGGAACAATCATGGGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATCTGGAAGTAGGCAAAATCTAGGAGTGGAACAATCATGGGCATA  800

seq1  GAGTGATAATCTGGCAGGATC-TTGAAGAGGGGCTATAGAGGCACAAAGG  849
      |||||||||||||||| |||| ||||||||||||||||||||||||||||
seq2  GAGTGATAATCTGGCA-GATCTTTGAAGAGGGGCTATAGAGGCACAAAGG  849

seq1  TATTTGCTGTCATGATTTTGGAGTGAGGCAGACATGGGGCACAGAAGTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCTGTCATGATTTTGGAGTGAGGCAGACATGGGGCACAGAAGTCA  899

seq1  AACCAGCACCTCTTGATATAG-TTGGTGGGAATTAATTATATTCAGTTGG  948
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AACCAGCACCTCTTGATATAGTTTGGTGGGAATTAATTATATTCAGTTGG  949

seq1  AGTGGTCTCAACAAGACTG-AGGCTGAGACAAGTTTATTGCAAGCAATCA  997
      |||||||||||| |||||| |||||||||||  |||||||| ||||||||
seq2  AGTGGTCTCAAC-AGACTGAAGGCTGAGACAGTTTTATTGCCAGCAATCA  998

seq1  GACTTTTTATAGTCTTATCAAAACCATAGTATAAATTTAGAAAGT-GGTC  1046
      ||| ||||  |||||||||||||||||| ||| || ||||||||| ||||
seq2  GACCTTTTTAAGTCTTATCAAAACCATA-TATTAA-TTAGAAAGTGGGTC  1046

seq1  AGAATTAACCAATACCTATT  1066
      |||  ||||||| |||||||
seq2  AGA--TAACCAAGACCTATT  1064