BAC Information

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BAC

Clone NameB6Ng01-015M06
Chromosome8 (Build37)11 (Build37)
Map Location 42,519,493 - 42,520,58836,141,906 - 36,142,061
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1
Downstream geneLOC100039376, Gm1815, LOC671994, Zfp353, EG620772, LOC628212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015M06.bB6Ng01-015M06.g
ACCDH849935DH849936
length1,092377
definitionDH849935|Mus musculus domesticus DNA, BAC clone: B6Ng01-015M06, 5' end.DH849936|Mus musculus domesticus DNA, BAC clone: B6Ng01-015M06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(42,519,493 - 42,520,588)(36,141,906 - 36,142,061)
sequence
gaattctgcttcttgtttcagaatatgaaagacaatagtcttttttatta
ataaccaattataataagtcttcattcaattatcctctgacagtcatggc
ccaaagtgattgatgttggtagacttccagcacaaagcactggcttggct
tgtgagacgatctgccagatgactgaatttactgcaacaaatattccacc
ttctcgcatggctttgtatgtagaatgtgtgcaggcttccttgttacctc
atgcagcctccatcgttccctatatcctgcctttatcccagtgtgcaaat
ttaactgaggtccggaggagatgatactcactaaaaattggcatcgagct
gggtgtggcagtggatatgaagatgcacatctaaagatgttaaaaaaagc
ctttggagtctggggggagcagactggtttgaatttggagcaacatgagt
tccaagacagccagggctacatagggggaccctgtctcaaaagaaaagca
tcaaaactgggaaagagtcactcctcctcttccaagaggggtttgatcta
cagtgatgcatttgctctctcagacagacagacagacaggcaggcagaca
gacagacaggacctcccctccactgcctggtgctggagcttacaacagtg
gagagagacatgtacaattaattaattaatcatcgagattgggtcttatg
tagtctgggtgccctggaactctccatgtacatcacgctggacttgaatt
taccgaagtctacctgcctctgcctctggagtgcttggattaaagtgtgc
accacgatacctactccatcatgcttttcttttttactggttattttatt
tatttacattttaaatgctatcccccttccaagtttccttcccttccaca
agcccccatcccctcctccttccctctgcctctatgaggtgctcctctac
ctgcccaccactcctgcttcagcggcttagcattccctatctgtgtcatc
aagcctccacagggaccaagggctctcctcctaataaatgtgtataaaat
attccatgtggccacattttctgtctttataatagaggaaat
gaattcctagtcccctaaactccagacaatggtacatacccacctctgcc
ccctccccaaaaactatacagcccctgaatcaccctaaataaagttgagc
ttcctctctgaaggtgatctgggtagtctgtcatattcatgggccttctg
ttccttttgtcctcctgggctggtggccaatagacttgggggaaaaggag
gaccataagaacttaggtatgacacccatggaaggagttacagagacaaa
atttggagctgtgacaaaaggatggaccatcttgtgattgccatatccag
agatccatcccataatcagcttccaaacactgacaccattgcatacacta
gcaagattttgctgaaaggacccagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42519493_42520588
seq2: B6Ng01-015M06.b_45_1136

seq1  GAATTCTGCTTCTTGTTTCAGAATATGAAAGACAATAGTCTTTTTTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTCTTGTTTCAGAATATGAAAGACAATAGTCTTTTTTATTA  50

seq1  ATAACCAATTATAATAAGTCTTCATTCAATTATCCTCTGACAGTCATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAATTATAATAAGTCTTCATTCAATTATCCTCTGACAGTCATGGC  100

seq1  CCAAAGTGATTGATGTTGGTAGACTTCCAGCACAAAGCACTGGCTTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGATTGATGTTGGTAGACTTCCAGCACAAAGCACTGGCTTGGCT  150

seq1  TGTGAGACGATCTGCCAGATGACTGAATTTACTGCAACAAATATTCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACGATCTGCCAGATGACTGAATTTACTGCAACAAATATTCCACC  200

seq1  TTCTCGCATGGCTTTGTATGTAGAATGTGTGCAGGCTTCCTTGTTACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGCATGGCTTTGTATGTAGAATGTGTGCAGGCTTCCTTGTTACCTC  250

seq1  ATGCAGCCTCCATCGTTCCCTATATCCTGCCTTTATCCCAGTGTGCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCCTCCATCGTTCCCTATATCCTGCCTTTATCCCAGTGTGCAAAT  300

seq1  TTAACTGAGGTCCGGAGGAGATGATACTCACTAAAAATTGGCATCGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAGGTCCGGAGGAGATGATACTCACTAAAAATTGGCATCGAGCT  350

seq1  GGGTGTGGCAGTGGATATGAAGATGCACATCTAAAGATGTTAAAAAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGCAGTGGATATGAAGATGCACATCTAAAGATGTTAAAAAAAGC  400

seq1  CTTTGGAGTCTGGGGGGAGCAGACTGGTTTGAATTTGGAGCAACATGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGTCTGGGGGGAGCAGACTGGTTTGAATTTGGAGCAACATGAGT  450

seq1  TCCAAGACAGCCAGGGCTACATAGGGGGACCCTGTCTCAAAAGAAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGACAGCCAGGGCTACATAGGGGGACCCTGTCTCAAAAGAAAAGCA  500

seq1  TCAAAACTGGGAAAGAGTCACTCCTCCTCTTCCAAGAGGGGTTTGATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTGGGAAAGAGTCACTCCTCCTCTTCCAAGAGGGGTTTGATCTA  550

seq1  CAGTGATGCATTTGCTCTCTCAGACAGACAGACAGACAGGCAGGCAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGCATTTGCTCTCTCAGACAGACAGACAGACAGGCAGGCAGACA  600

seq1  GACAGACAGGACCTCCCCTCCACTGCCTGGTGCTGGAGCTTACAACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGGACCTCCCCTCCACTGCCTGGTGCTGGAGCTTACAACAGTG  650

seq1  GAGAGAGACATGTACAATTAATTAATTAATCATCGAGATTGGGTCTTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACATGTACAATTAATTAATTAATCATCGAGATTGGGTCTTATG  700

seq1  TAGTCTGGGTGCCCTGGAACTCTCCATGTACATCAGGCTGGACTTGAATT  750
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGTCTGGGTGCCCTGGAACTCTCCATGTACATCACGCTGGACTTGAATT  750

seq1  TACCGAAGTCTACCTGCCTCTGCCTCTGGAGTGCTTGGATTAAAGTGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGAAGTCTACCTGCCTCTGCCTCTGGAGTGCTTGGATTAAAGTGTGC  800

seq1  ACCACGATACCTACTCCATCATGCTTTTCTTTTTTACTGGTTATTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGATACCTACTCCATCATGCTTTTCTTTTTTACTGGTTATTTTATT  850

seq1  TATTTACATTTTAAATGCTATCCCCCTTCCAAGTTTCCTTCCCTTCCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACATTTTAAATGCTATCCCCCTTCCAAGTTTCCTTCCCTTCCACA  900

seq1  AGCCCCCATCCCCTCCTCCTTCCCTCTGCCTCTATGAGGGTGCTCCTCTA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCCCCCATCCCCTCCTCCTTCCCTCTGCCTCTATGA-GGTGCTCCTCTA  949

seq1  CCTGCCCACCCACTCCTGCTTCAGCGGCTTAGCATTCCCCTATCCTGTGT  1000
      |||||||| ||||||||||||||||||||||||||| |||||| ||||||
seq2  CCTGCCCA-CCACTCCTGCTTCAGCGGCTTAGCATT-CCCTAT-CTGTGT  996

seq1  CATCAAGCCTCCACA-GGACCAAGGGGCTCTCCTCCTAATAAATGTGTAT  1049
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  CATCAAGCCTCCACAGGGACCAA-GGGCTCTCCTCCTAATAAATGTGTAT  1045

seq1  -AAATATTCCCATGTGGTCTACATTTTCTGTCTTATAT-ATAGA-GAAAT  1096
       ||||||| |||||||| | |||||||||||||| ||| ||||| |||||
seq2  AAAATATT-CCATGTGG-CCACATTTTCTGTCTT-TATAATAGAGGAAAT  1092

seq1: chr11_36141906_36142061
seq2: B6Ng01-015M06.g_288_443

seq1  ACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAAG  50
      ||||||||||||||||||||||||||||| |||||||||| ||| ||| |
seq2  ACACCCATGGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGACAAAAGG  50

seq1  ATGGACCATCTAGAAACTGCCATATCTGGGGATCCATCCCATAATCAGCT  100
      ||||||||||| |  | |||||||||  | ||||||||||||||||||||
seq2  ATGGACCATCTTGTGATTGCCATATCCAGAGATCCATCCCATAATCAGCT  100

seq1  TCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTAAAAAGAC  150
      ||||||| |||||||||||||||||||||||||||||||||| ||| |||
seq2  TCCAAACACTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGAC  150

seq1  CCAGAT  156
      ||||||
seq2  CCAGAT  156