BAC Information

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BAC

Clone NameB6Ng01-016N12
Chromosome11 (Build37)
Map Location 77,322,919 - 77,405,867
singlet/doubletdoublet
Overlap geneTrp53i13, 1300007F04Rik, Taok1
Upstream geneAbr, LOC100043483, A830053O21Rik, Tusc5, Gosr1, Cpd, Tmigd1, Blmh, Slc6a4, Ccdc55, Efcab5, LOC628108, Ssh2, LOC544800, Coro6, Ankrd13b, 2210008F06Rik, Git1
Downstream geneLOC668641, Nufip2, Cryba1, LOC100043506, Myo18a, Pipox, Sez6, LOC100043518, Phf12, Dhrs13, Flot2, Eral1, BC017647, LOC100043525, Traf4, Nek8, Tlcd1, Rpl23a, Rab34, 4933404M19Rik, Supt6h, Sdf2, 2610507B11Rik, BC030499, LOC100043544, LOC100042648, Spag5, Aldoc, Pigs, Unc119, Foxn1, OTTMUSG00000000132, Slc13a2, Slc46a1, A830091I15Rik, Vtn, Og9x, AI316787, Poldip2, Tnfaip1, Ift20, Tmem97, Nlk, LOC100043570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016N12.bB6Ng01-016N12.g
ACCDH850693DH850694
length475694
definitionDH850693|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N12, 5' end.DH850694|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,405,387 - 77,405,867)(77,322,919 - 77,323,611)
sequence
ctctcatcttgttagtgacaagcccttgtcttctagttgtggcagtaaaa
tctgtctccaaatgtttccaattcttatctggggagcaaaatcaccactg
agaaacatgttggtatagtagatgttgaagtgctaagtagaaggaatgta
caaagaactattgtggctaagggatgaacaggaagattcctgagggagtg
agattcctccctcttcctccaaggctgagttgaaatttcttttctgctta
agactcccaaatgaagaggcatacaggcatacattatcactcccaactgt
gatactgagttatatccccaactctatttcttttttagaaaattaaattt
atagttttgttttgtttttgtatgtgtggtatatgtatgtttgtggtggt
gtatgtacatgtgtgtgatgggtgttctcagatgatggttagagtaagac
ttcaggcattgtgatctgtccttaa
gaattcaatatgtagaccaggatggcctcaagctcagaaatctgcctgct
tttgcctctagagtacttgattaaagatggtagccaccaagcccaggttt
tttgttgtttgttttgggtttgttttgttttgacatttttaatttctttt
tcttttagcacatctttcactaaccacttacccggtcccacgtgagactg
aagtcaggaatgagcgtgggcttagccacatacaggtgggccaagagtgc
aagctggagcttcagccaggggtgggcacaggggtggtagaagaaggcga
taccctcagcctggaggaaaggcagagatatcaagccaggcccagcaccc
tcccagagaatcacagcgtttcctatcctaggtgccaggataaggaggtt
accagaaagtgcccatccacttccaggaaaaggcaaagggtcttgagtac
tgagatgtaatcctttctaattcacttctcttctccatcaagtgcacacc
ccccccccccaaagatgcacctctgggcaagaccacatggctgtaacccc
attagactccagacatgctccctagcccccacacacggtgctggggatcg
cactgacccgtgtccctggccctcagacccctgcatctggaggtataggt
tgtgagctgtcacgtgagtactgggaacagaacgctggaagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_77405387_77405867
seq2: B6Ng01-016N12.b_49_529 (reverse)

seq1  TAAAGGACAGAACACAATGCCTGAAGTCTTTCTCTGACCATCATCTGAGA  50
      | ||||||||| |||||||||||||||||| |||| ||||||||||||||
seq2  TTAAGGACAGATCACAATGCCTGAAGTCTTACTCTAACCATCATCTGAGA  50

seq1  ACACACATCACACACATGTACATACACCACCACAAACATACATATACCAC  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATCACACACATGTACATACACCACCACAAACATACATATACCAC  100

seq1  ACATACAAAAACAAAACAAAACTATAAATTTAATTTTCTAAAAAAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAAAAACAAAACAAAACTATAAATTTAATTTTCTAAAAAAGAAAT  150

seq1  AGAGTTGGGGATATAACTCAGTATCACAGTTGGGAGTGATAATGTATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGGGATATAACTCAGTATCACAGTTGGGAGTGATAATGTATGCC  200

seq1  TGTATGCCTCTTCATTTGGGAGTCTTAAGCAGAAAAGAAATTTCAACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCTCTTCATTTGGGAGTCTTAAGCAGAAAAGAAATTTCAACTCA  250

seq1  GCCTTGGAGGAAGAGGGAGGAATCTCACTCCCTCAGGAATCTTCCTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGAGGAAGAGGGAGGAATCTCACTCCCTCAGGAATCTTCCTGTTC  300

seq1  ATCCCTTAGCCACAATAGTTCTTTGTACATTCCTTCTACTTAGCACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTAGCCACAATAGTTCTTTGTACATTCCTTCTACTTAGCACTTCA  350

seq1  ACATCTACTATACCAACATGTTTCTCAGTGGTGATTTTGCTCCCCAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACTATACCAACATGTTTCTCAGTGGTGATTTTGCTCCCCAGATA  400

seq1  AGAATTGGAAACATTTGGAGACAGATTTTACTGCCACAACTAGAAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGAAACATTTGGAGACAGATTTTACTGCCACAACTAGAAGACAA  450

seq1  GGGCTTGTCACTAACAAGATGAGAGGAATTC  481
      |||||||||||||||||||||||||||||||
seq2  GGGCTTGTCACTAACAAGATGAGAGGAATTC  481

seq1: chr11_77322919_77323611
seq2: B6Ng01-016N12.g_68_761

seq1  GAATTCAATATGTAGACCAGGATGGCCTCAAGCTCAGAAATCTGCCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATGTAGACCAGGATGGCCTCAAGCTCAGAAATCTGCCTGCT  50

seq1  TTTGCCTCTAGAGTACTTGATTAAAGATGGTAGCCACCAAGCCCAGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTAGAGTACTTGATTAAAGATGGTAGCCACCAAGCCCAGGTTT  100

seq1  TTTGTTGTTTGTTTTGGGTTTGTTTTGTTTTGACATTTTTAATTTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTGTTTTGGGTTTGTTTTGTTTTGACATTTTTAATTTCTTTT  150

seq1  TCTTTTAGCACATCTTTCACTAACCACTTACCCGGTCCCACGTGAGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAGCACATCTTTCACTAACCACTTACCCGGTCCCACGTGAGACTG  200

seq1  AAGTCAGGAATGAGCGTGGGCTTAGCCACATACAGGTGGGCCAAGAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGGAATGAGCGTGGGCTTAGCCACATACAGGTGGGCCAAGAGTGC  250

seq1  AAGCTGGAGCTTCAGCCAGGGGTGGGCACAGGGGTGGTAGAAGAAGGCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGAGCTTCAGCCAGGGGTGGGCACAGGGGTGGTAGAAGAAGGCGA  300

seq1  TACCCTCAGCCTGGAGGAAAGGCAGAGATATCAAGCCAGGCCCAGCACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCAGCCTGGAGGAAAGGCAGAGATATCAAGCCAGGCCCAGCACCC  350

seq1  TCCCAGAGAATCACAGCGTTTCCTATCCTAGGTGCCAGGATAAGGAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGAATCACAGCGTTTCCTATCCTAGGTGCCAGGATAAGGAGGTT  400

seq1  ACCAGAAAGTGCCCATCCACTTCCAGGAAAAGGCAAAGGGTCTTGAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAGTGCCCATCCACTTCCAGGAAAAGGCAAAGGGTCTTGAGTAC  450

seq1  TGAGATGTAATCCTTTCTAATTCACTTCTCTTCTCCATCAAGTGCACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTAATCCTTTCTAATTCACTTCTCTTCTCCATCAAGTGCACACC  500

seq1  CCCCCCCCCCAAAGATGCACCTCTGGGCAAGACCACATGGCTGTAACCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCAAAGATGCACCTCTGGGCAAGACCACATGGCTGTAACCCC  550

seq1  ATTAGACTCCAGACATGCTCCCTAGCCCCCACACACGGTGCTGGGGATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTCCAGACATGCTCCCTAGCCCCCACACACGGTGCTGGGGATCG  600

seq1  CACTGACCCGTGTCCCTGGCCCTCAGACCCCTGCATCTGGAGGTATAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACCCGTGTCCCTGGCCCTCAGACCCCTGCATCTGGAGGTATAGGT  650

seq1  TGTGAGCTGTCACGTGAGTACTGGGAACAG-ACGCTGGAAGAGC  693
      |||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTGAGCTGTCACGTGAGTACTGGGAACAGAACGCTGGAAGAGC  694